Map Locations of contig_158382 (9772 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_158382

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19179 10 2181 bp AK369231 Available Available None
MLOC_19178 2 1169 bp MLOC_19178.2 Available Available LOC_Os02g44860.1, FRAME:-3, EVALUE:8e-102, 13102.m05026 protein GDSL-like lipase/acylhydrolase, putative, expressed





CDS Structure of MLOC_19179






CDS Structure of MLOC_19178






Contig Sequence (9772 bp)

>contig_158382 9772 assembly3_WGSMorex_rbca.fasta
TAAGGTTTTTCCTAGTAGTGGAAGCAGAATACAAAACACTTGCAAATGTCACAGCAGAAG
TCATCTGGATACAGTCTATGCTTAAGGAACTTGGAGTATCCCAAGCTCAATGACCTTGTT
TATGGTGTGATAATATTAGTGCTACTTACTTGACTGCTAATCCAGTGTTTCATGCCAGAA
TAAAACACATTGAGATAGATTTCCACTCTCTGAGAGAACTTGTTGCAAATAAATAGTTAG
AGGTCAGATTTATTCCTTCCAAATAGCAACTTGCAGATGGGTTCACAAAGGCTTTGCCAA
CCAAAGGCTTTGAGAATTTTAGACGTAATCTCAATTTAATCCAGTTGTGATTATGGGGGG
GTGTTAAACATATTATCTATCATGTTATTGTCACGTTACAACTTGAAATCGTAGCTAGCC
TTGGAGGGCAAGTTGGGTTAGTTAGAGATATCTTAGAGGAGGATTATATTTCTGTTTATC
TCTCTCTATCCCGATGTATCTTCTCTCTTGTTGTAACAACCTGATCGATGTATGCCTCTA
TGAGATCTGGCCCCGTTCAATCAATATATAAAATGCGGGCTCTCCATTTTGGAGAGTCGA
GACGCTTTACAATTCCTTTCACATATTAGACTTGCCTCTCAAGTCCCCAGCCAACATCTG
CTTGAAAGTAATTGGGCTGCCTTGCTGAAAAAAAAATAACTTCTTGCTGGTGTTTAACCC
CTGCTTTGATGTGCCTTACTTTATGGTGAAATTGCAGAAACCTACTGAAAAAATGGAAGT
AGTAACCTCAGTTGGGTTTTGAGGTTCTGCACAAATTTATTGGATCTCCGGTATGTGCAT
CCTAGTTCTGACGTAGCTGCATCTTGCCCAGAATAATCTAAGATGATACTATTATTTCTT
GATTATTCTGAACCTATAAAATCCTTCTGGAACACATGCTTCATTGTGTGCAAATTTCGG
ACAAAAGGAGACACTCTTTCATCTAGCAATGTCATATGGAAAAGGATAATTTGAGATACA
TTTGTTGCAGCAACTGCCCATGGTTTTGCTTGAAATTCTTCCGCTTCCACATTTCTGTCG
TCTGATGCTTCTGTTTGTACTAAGTAATCTCCACTGGCTACTCCAGTGAGGCTTCTTAAA
CATGGAAACTAAATACACATTATCATTCATTTCACTCTGGCATGCGTATAAATAAAATGC
ATAAATTTATCTCAAAGTAATTTGATAGCATATGGTTTTTATCGGGTATTACAAATATGT
CCAAACATGTAGACTAGTGGTGAAGGTTGACTGTTATGTTTTGAAAGCCATGTTCATAGT
TGAAATGAAACTTTTATGGACTTGGAGGGAGTAATAAGATAGAGCCAAACAATACTTCTA
GCACAAACATAAGAAACACAATTGTTTGTGGTTTGGTCCACCAAATTAATGACCCCGTAT
TTTGTTTTTCATGAAACTGTTTACATGTGTTTTTTTTCATTTAACTTGCTGAGTGTCATC
TACTTGTAATACTCCATCAGCTCGTAAATTGAAGAGATTTTGGATAATAATTTAGATTGT
CAGTGTGTACCAGAGTATTCGGACTATAGGCGCCAGTTGTTAGACTATCGCCGCAACGCA
CGGCAAAGACTAAAGACTGACTTGGATCGGTCGCAGCTGCCCCAAAACACAAAACCACAT
TAATTTGAGGCTCTCTTATATGTCGTGGAACGATACAAAGATGCATTGCTATTTCCAGTG
CTGCGACACTACGCCTCGGCCAGCTCCCTGAAGGTGATCGGGCCGACGAACCGCGCCGGC
CCGTCGTAGAACGCTCGGCCGGCGAGCCTGGAGGTGGCCTGGGTAGGGTGCAGGAAGTCC
CAGAAGAGGAACTTGCCGCGGTCGCCGCAGTAGCTCGCGCTGGGGGTGCACCCTCCATCG
GCGTTGAACCTGCCGCCGCCACCACAGCACGCGCTCTTCAACTCCGTCAGCCCTGCACGC
AACAACGCGAGCCACATTACATTCTTGTTGCAAGTATGGTCATGCATGACGCTATCTCTT
TGGTGTCAGCTTGATATTCATATGCTGGATTTGATGGAGTCCCAGACCAGAGGATACTGC
GATTTTACCTGCAGACTGTGGGTCTTGGACGATGCTGGAGACGAGCTCGTAGGAGCTGCC
AATGGCGTACTCCATGCCATGCATTTCGGAGCTGAGGCCGGCGAACAGGTCTTGGAGCCC
GTCGTTGAGGCTCTTCGCTAGCCGGTTCAGCGGCTCCACGCACTCCCCGGCCGGGTTCCG
GCTCCTCCAGTACGGGCAGCACCCGAGCGGCGCCACGTCGATCACCGCGAACTTCCTCGC
GCCAAGGTTGTACAGCGTCTGCACACTCATGCAGCCGACGATCAAAAACATGAAGATGGA
TCCCCTGTAGAAATGATGCACATTCATCTCTTACTTTGACGTGGCTGTCGTACGTGGAGA
CGACGGCTTCCCGGAACTGCTGGAGCGCGGTGGAGTCCGGCGACGTGTCCTGCGAGAAGA
AGTCGATGGCGTCGTTGGAGCCCGCGCTGATGAGGAAGATGGACTTGGACAGAAAGGCGG
ACGCTCCGAAGGCACCCAATCTGGCTGTCAGCATCTGGTCTTTGAGATCCGAGAAGTACT
CGATCTGCTTCGTCATGTTGATCGTATCTCCCTAGTAACATGATCATCACTTGGTTGTCA
ATGTTGGTTGAAGGTCCAGTGTAGTACTAGTACTTACTGATTTAAACTCAGTAACGGAAA
ATGTTGAAATTTTGAATTGGGGGTGGTTCATGACATTAAAGAGAGAGATGGAGATTCAAG
ATGCGAAGAATTTTCTCAACTTTAGGTAGTAAGGAATCATCTGCTCCACCTAAATTGTTC
CGGTGATCATTACAGTGTAGAACATAATTTCAAATGTACTTGGGGAGTTGGGGTTAGTGA
GCAATTCTATCGATATTTGTGTCTGGACAAACAAAATTAGAATTCGTGTTTCTGCATCAC
AAAGAGTGCCAGAAATATCACTATGATAGTTAAAAAAACAAAGAAGTATCACTATGATAG
TTAAAAAAACAAAGAAATATCACTATGATAAGTCAGACAAAGAACCACTCTCAGATACGT
ACTGTGGAATCAAGAACACCGGAGCCTCCAGAAGCAAAGCTGGCTCCTCTCATGAAGGCA
GCAGCAGCCACCGGCTTCTTGGTAGTGTTTCCCAACCCCTCGCCGCCACTGCTGTTAGCG
GCGACGAGAGAGAGATATGGTGGCGGGCTCCCGCTGAAGCCCATGTGGACAGCTGCAAAT
TTCACCATTGATCAGACAGAGAGCCAAGCTGCCATTGATTCAGAACGTATGATCAGTTGG
ATTGCTCACCCAAGAAGTCGGCGCCAATGAACCCATTGCTGAACCTGCCCGTCGGCTCGC
CGCCAGGGAAGTCGATCCCGTTGTGAGGGAAGTCGGCCCTGGCGCTGCTCCCTGGCAAGT
TGTTGTTGTTTCCCACATCGGCAGTGGAGTCGCCAAACACAAAGATCGCCGGAACCATTG
GCCTTGAGACGACGGTGCTGCTCACCATAGCGACAAACAGCAACCGGATCGCTGCAGCCA
CGAACAGCAACCGGAGTGCCACCGAAGCTCGTCGCAGCACGGCCATGGCAGACTCCAGTC
ACCACACAAAGAAAAAACTTCTGATACTTCTGATGCTTTGCTAGCAGGTCTAGCCAATTT
ATTCTGATGATGGAGAATGAAATGAACCCTGGCAGCATGCTCCAGCCAAGCTCAGTGCAC
CGTACTACACCTTCTCCAATTACAGTTACTTGCTCCATTAAAATTGTACCAAGATAACTA
CCACAAGGCTGAAGAGAAAACAAGCCACAATTGTCTAGGTTCTAGCTGCCATTCTTAAAA
ATATTTGCTGGAGTTTGCACCACATGGTACTGAAACAAATCAATCCACACAATACATCTG
AAGATTCAAAATTAAAATATATATATATCCTTCAAAAAGTTCAGTATGGGAATTCATTGA
TGCATAGTGATATATACAGAGCACAATCATAGTGCAATCTGTCAGTGAAATCAGAAGTAA
AACCACCTTTTTCTCAAAAGATAAAGTAAAATAAAACCAATTACTAATGGTATTCATCTC
TGAAAATCAGAACACACATCACGCATCGGGTAGAAAAAAAAGGCACGAATAAAATGCATA
AACACACTAACCGCATTTCTGCTGATGTTACAATGTGACAAGTTACAAAGGCAACCTCTG
CCAATCAGCGCAGCATTTCCTCCAGAAAGTTTTTGCTGAGCATCTGCTCTATGAACAATA
CAACAAAATTTTGCCAACTGTTTCACATACATTGTTTTCTCATCGGCACAAATTTTAGTG
CTGATGTAATTTTCAGGGGACAGTGTCCCTTGTAATGACAGATGCAAAGATGATTCGGAC
ATCATCCGTATAACGAAGACAAGTAGGCATGTTTGCTTCTTCGGTAGATACCATGTGATT
ACCACAACTAAGACCACATGCATGTGCACTAAGACAGAGTTACGCCTTTTTCCTGGTGAT
TCTGTAGTCAGATAGAAATCATGTCAGAATAATTGATGCAAACGGTGGAAAAGAATTGCA
GTGATGATTAACAAACCTGAAGCAATGAATCCCAAGCGCGTTGGTGATTTCATGGATAAC
CGATGTAGCAAAATGCATGTACAGCGCCACTGTCAAATTGATCAAAGTAGTCAGATCAAA
GATACGTTTAGCACTACAGCCTATGATGGGCACATGATAATTACTGTAATCCATGTCTTG
TGATATATATTTGTCAAGTGAAATTTGTTACTGTAAAGAATAACTTGGAGGATCCATCTG
AAGCTTATAAATCAATAACAAGTACCGAAGCACGACCAAGTGACTAATACAACATTCTAA
TGTCTGACCAAACACATGACAATATGAACAGAGGTAGTACTTTTTAGCAACAGTACGAAA
ATGATCTAAACGTCTTATATTAGTTTACGGAGGTAGTACTTTTTAGCAACAGTACGAAAA
TGATCCCTCTAGTATATTGAGTGCACAACTCTGCAACTCATCCACTGAAAGAAACCGTGC
TGTGAAAATAAGGTAATACCTGTAAATAAGCAGTATATCAGGAGAACGAGCTGCTCATCA
AAAAGGGGGTTTCTGCAACAATGAATGACCATAAAATCAGAATGTCATACAAAACTAATA
TTATGTACAGTGTAATACAGAAGGCTCAGAGGCACAAACCCATCATCAAGTCGGGCAGTC
AGCGCATTAGCAATTGCAAAAGGAAAATATGCTAGGGCCTGCAAAAGGAAGCCAGTTTTT
AGACATGACAAATTATAAACATACTAGCATAGGCATCATAAAGAACACAGCACAGGAACC
AGGTCATTAGGCAAGTACCATGCACATTCCTGTCTTCAGACCTTTGGGTTCATCACATAA
GTGAGCCAGAATCATTCTTCCCTGTGCAGCAACATAAGCAGATAAGTAATGTTCATGCCG
TTACCAAAAATAGCATCTGTCACACAAGAAAAATAGGCCCCACCATGCGCGATTTATACC
GGTGTATACAAATTGTTTCAGGCATACCAAACCAATAAGAGCACAATGGTAAGAGTGTAA
ACTAGTCCAGCTAACAGTTGCTTATTCAAAACTACCCACAACTTGAATCTCAACTTCAAA
TTGAAGTATTCTGTCACCATGGTATATATACCATGAGACCAATCAAACAACCCTTGGATA
AAGAGTCAAAATAAGAGCAGAATCACAACAGAAATGACAAAGCCCAGAGTGGCAGGCAAA
ATGACAAATTAGTTTCAAACATGAAAAGGTATTAAAGAGAAACAGCACCAAAACACAGTA
TGTATTAGAAGAAGACCTTACCACAAGATAGCCAAACGCAAAACCAGTTCCAATAATTAG
CAGGTGTGGTTGGTTTCTCATTATATCTGAAGGAGATAGATAGGACCTGCGAATTAATTT
AACGCCCATCAGTAATGATGTAACTGATATTTTTGCCCACATGCTATCTTCAGTTACTGC
TCTTTTTTAATTAAAAAAGAGTATAATAAGATATATACAATAGAACTCAGAAGGGTCAAC
AGCATACCACACAAGAGTTCCCGCCATCAGTAAACCGAAAGGGAAGAGCTGGTAAAAATG
AAGGGTCGAAAGTCACATGGAGAAATGAGAACCGCAATATGACAACAAATCTAGACCTTA
CCATTGCTAGTGCCAGCAGCATGCTTCCTTTTCTTGCGACGACGACTTTGTAAACATTGT
GAGTGCTGTAAGTTAAGACACTAGCTTAGTCCAGCTTGATTAACACTTGAATGTCAGTTC
TAAATTAAACAAATGTGGTGCCTTATCAACTCAAAGGCTCAAAGATCTGCCAACTAGCCA
CCCAAAATCAATACAAGAACATAAACAAGCTAAACATCCAAAAGAATAAGAGGGCAATTC
AAATCTCTCGACACTGGAATTCTTTGAACTGGAGTATTAGAGCTATCTAGTACAGGTATT
TCAGATCTATTGAGCAAGCGAAAAACATAGATCAGATAAAATGAGAATCAAAGCAGAAAA
TACTACACAAAATGACAAATAGAACTTACTTAGAGCCAATCGTCGGGATTACAGCAAAAG
CAATCATTAGAAACAGCACAATGCCATATAGGGAGATTTCTGGAAAAGAAGCAATGGACA
ATAGACTTTAGCATAGGGAATACCAGCATTTGTCACTGTCCGAATTCATGTTACTGTTTT
CAGTTTTCACAGTATTAACAGCACAAGGTTACATCGGCAACAGATGAAACAGTCAAGCTC
ATGTTAAGGAATTTATTAGCTTATAATTTTAATACAAAAAACTAAATTAGAACCATAAGC
TTGGTAGTCTACATACCAGGAACAAGAGGCAGCCAATTAAGGAGGGGGACTGATTTTCGG
AAATCCTGTGCCCACCATTCAGCCCCTATGGAAGGAAAATGAAAGGAAACATGTGCAGTT
AATATCAATATACTATATGGCTGGATATGAATCACATATGCATGATGTATACATATGCAC
AGTATATTAGCAGGAGAAAAGTACAGATTGACAAGCTCGGCATGGATTTGATTCATGTGA
AGGTTGATAAAAGTAAGTCAAATAGTACCTGTGAAAAAGGTGACGATATGGCACACATAG
ATCAGCATAAGGCCTTCAGTCGGCCCATTGACTACTGGAAGAACAAGTGTGTTTGTAAAA
TAGCTACACAGAAAACAATTATGCGTGAGATGGAAAAATGATACACAAAAGCAACACAAC
AAATGTCTGCCGAGGTATCGCCAATGCAGATATAGGAATAATCATAAACATCACAAAGGA
TCAATGGTATGAAGGTTTCAAACTCTAAAATAGTAGTGCTTTTATGCTCTTGATCTAAAT
AGGGTAGTGGGTGGTCCCAACATGCAAATCAACTGTCCATGTGCTTCACAGTTGGCACCT
TCTATGAGAGCATTAAAACGTTACCAACATAACAAACCACATGAACATAGCTGGTCCGAC
TAAGGCATATGCAGTTTCACGAACCATTTGAAAAAAAAAAAAGATGGCACAAGCACTGTG
ATACATGTTCAGCATTTGAAAAACTATAAAGCATCCAAAGAGACTTGGAACAGCAACTTC
ATAAGGGCAACATTATGCAAGGAAAGGTATAACCTGTTTGGTAATAGATGTTGAATGGTA
TGGAGCAATGCTTGCGGCTAAGATAGTTTCGTACTGTAACATAGAAGCGAAAGAAACAGA
TGAACTCACTGTTCCCAGGTTGCGAAGTAGAAGGGGACAGCTGAAATGACCCAAAACCAG
AAGGTAGCGTTTCCACACATAGCTGTGCTTCCAAAAGCCAGGGACTCGAACTAATAAATA
AAGTGATCAGTTCACAACAATTTTAGTATCTTTGCATATGTAAGAAACAAAGTTGACGAA
TAGCCTTACAGCACATGCAAGCGCATCGCATCCTGTTCACAGTAAAAACTTGTCAGTGTC
ACATGCATGGTTTGTCAAGACTGACTTCAGCTAGCTGGATTTGGGATGGAGATTACCGTG
ATCAAAAAGTTCGCCTAAGGGACTCGATGAGTTGGTACGTCTTGCTTGTTTACCATCCAC
AGCATCAAAAGTCTGCATCCATATTACAACATGTATATTACAATTCTAAACTGGCAGTGA
CTGCAAATTACACATGGTAGAATCGTAAGAAAATCAAGATATTTGTGAATTAGAGATTAA
TAGGAAAAGGGTCCACCACACATTTAGGAACTAATAGCAAGCCCTTTGTAGCATGGGTCA
TAAATGCTTTAACAATATTGCCAGAACTGCAGATTAATGACAATGCCTCTACAAGCATTA
GTTGAATGTCATACTTATCTGTTCTATAAAAAACATCACACTAGTGCTATGCTGAAAACT
GGAAAGGGAGAGTAAGATAGTAGTAGAATATCGCATAATTGGATGAGCGTATAAAGTTGG
ATACCTGGTAAAGGAAGAGAAGTATTCCATGCGCAAGATGAACCCATCTAGGAGGCGCTG
TATCAAGATGAGGTGAATACAACTGCGGCGAAATGACAGACACAAGTTTAAAGCTTGCTA
GAGTATTACTGCGGCGGCAACTAACAAGCAGCAAAACCTTCATATTTGCGTGTTGTGCAT
TACTGACATAACATAGTACTTACAAAGCCAAGGAATGCTGACGTCAGCAGAAACATGAAA
CCTGTCAGCGTGATCTGGAAACAAGAAGAAACATTTTATCAGGCCTTGAAACAAAATACG
ATTGCTTGCAACAGCAGAATGTGCAGGACCCTCACCATGTTTGGCCTGCGGATGATTTCG
ACATGGAGGCAAAAGAAACAAGGTCAGTCTCTGGTCCGCACACATAGTTGAACAAACAAA
ACAAGATGAAGGGAAAAGCGTAAAAACGCAATCACTTCCACTGAGTAACCACGATAATAA
TTTACCGCTGCCGAACTGTAATAATTATAAAACAAAACAGTAGTATATAAACAAGCAAGC
ATGGTGTGTCTTAGGTTCACAAGCCACAACGAACCCACTACGGCAGAATCCTTCATTAAC
AATCGTGCGTTCGGATCACTCTGACCCTACACGAATATAAAATGACCACATTGAGGTTTC
GAATCGCCGGCTTTACAGAAACTAGAGAACACCCCCGATAACATGTGACGAAAGCGAGCA
ACTAATCCGGGTATTAATTATACGGCATGGAATATGTGCAAAGCAGGCTTTCCAGCGCCT
CATTAGCGACTCCACTAAGCGAAAAGCCGGGGGTGACTGAAGGCTGCTTTCGCGTTGTCT
GCACCCTGTGCCTGCAACCGCAAGATGCTCCCCAGGGCCAAAGGCGGACGGTTCCTCATG
CCGTTATGCGATAATAATAGTATAACGGCGAAAGAAAAGCACGCATTCCACATCACGCTC
GCGTGGGGGGCTGAACTGAACACCGCCGGATCATGGCGGAACGCCGGGACGCTCGTACTG
TGCTGTCCGCGCTGAGATAACAGGAGAACCGAACGCGTTTGCGCCGGTCGGGCGGATGCA
TTGCCCGAGCTCGGCGGGGAACGGACCGTGCGGGCTCGCGCGCGCGTGGATGGGAGGTGC
ACGCGGAGGACGGCGTACGAAGTAGGAGGGGAGGGGAGGGCGCTTACGGGAACCAGAGGG
GGAAGACGTTGACGAATCGCGACCAGAAGGGCTGGAGGATGTACTTGGCGAC