Contig Data
morexGenes
Links



Map Locations of contig_1583732 (2222 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1583732

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19160 1 516 bp MLOC_19160.1 Available Available LOC_Os03g03810.1, FRAME:-3, EVALUE:1e-16, 13103.m00380 protein DEF8 - Defensin and Defensin-like DEFL family, expressed





CDS Structure of MLOC_19160






Contig Sequence (2222 bp)

>contig_1583732 2222 assembly3_WGSMorex_rbca.fasta
CATAAGCCGAGTGCGTTGTTTTTACCTGGTGTTTTTGCTTGTGTACACGGCTTATATTCA
AATAAGCCGAGTACCCGAAAAAAAGAACACGACTTATAGCTTGCCACACGGTAAAACGTG
ATTTTCTAGTAGTGAAGTTTGATTCTTGTAATGTGTTAAGACCTAGTGTTGCTTAGAGCA
ACCCCACCCATTTCATCCGCCGCCGTTCGTTTGAGTCCGTGTGGACGAAAGTAATGGCCC
AACGTGCGGATCCATTTCCAAAACGCGTCCGCTTTGCGTCTGCGTCGACCCATTTCTGCC
TCAAATTTGGGACTGAAATGCGTCGGCGTGGCCTGGCCTACTTGTCACACATGTGTCCGC
ATGTGGCCGGCCTGGCCTACTTGTCACACAGCCATCCACCCACCTCTGCCTGCTTATTTA
ATTCGCTGACCCACTCCCACCCACTTCTCTCATATTATTATAATACTACAATGTTGTTGT
CCACTTGTTTCCTGTTGGGCGCATGTGCCGACCCATTTTAAAAAACAGACACGGACAGGC
CGGCGGACGATCCAAACGGACCAAAAACGGACAAAGCGCGCGTCCGTTTGGGTCGCCCCG
TTGGAGTTGCCCTTATAGAACTTGTTTTGTTTGTTCATTAACACTGTATGCAACTTTATT
TTTTCCAATGGCATATTATGAATGCTTATTCAGTGCCAAACTGCCAAACCATGTTAGTAT
GTACATCAAGGATTGATATGTCTGCGTCTGCCCAGTTTCATATTATGCCTTTCGCGTTGT
TCCATTTTTTCCCCAGTATTTCACATATTGAATTTCTGTTAGATAAGCTATATAGGTACT
TTTGGTTCTCCACTAAGTCCTGGCCAAATCTTCAGGGGTGGTACTAGGTCTACTTCCAAG
CTTTACTTTTCTTTCTTTCGAAATATTACTTCCCTTCTAGACTTCTAGTAAAGTTCCGTG
TCTTGTTTGTTCCAGTTTTTAATCTTATATTCATTTCAACCCCCAAAACAGTAGCAGCTC
CAGTTCTGGAGTGTTGGATAGATTATTCAACTTAAACTGTCTCCCTGCGGAAACTTTATT
CGGATGGTATGATGTTCATGTACTCTGTAAATTAATATAAGATCTTTTAGATCACTACAA
AGGGAGTACTTCCTAGGAGTAACACTCACATATGCACCATACATCACACAGATAGTATTA
TTCAGTTACATTATTACACGGAAGCATGTATGCAAGAAGAAAACAGGGCCATCTAGCAGT
TCATGGTGCAGACACAACGCTTCCGAATGCCGTCGCACTTGCCTTCGGGGAAACGCTCGG
TCAGGCACACACTTGCACAGTTGGTGTCGCTCACGCACAGCCCCACAAACTTTCTGCTGT
CTGACCTACACTCCCTCGCCAAAGCTACCTGCACTGCTCCCTGGAACTCTACACGGGCAA
ATCGATGGAGGAAATCAGCCATCTCACATACATAATTGTAGCAGTATTGTCAGTTATCTC
AGATAGTAGTAGGGTGTGTACCTGTGGCCGCAAGAAGCAGGAGGACGACCACAAAGACCT
TCATGGACCGATCCATTTAGTTTCTTGTGTGAGAGACTAAGAGGGTTGTATGACAGATTA
AGACCTTCCAAGGTGGATTGTATGATGGATGAATGTAGAGGAGGGAGGGGGGCTTGTTAT
ATACTTGCATATCTTTCTTGCTTCCAGGCTAAGCGAGCAGGTTTTTGTAGGGTAGTGTAA
CTGACTACCCACTTTTATAGGGTAGTGTAGCTGAGTACCCGCAAAAGAACAAGGATAGTA
CAACTCATTTTTTCTTAAGAAGCGGAGGTAAAAGATTTGCCTTATCTTTTTTGTTTTTGT
GTGCGTGAATTATTGGTTTTGCTATGGGTTATCAATTGCAGCATTACTACCTGATGAAGA
GCTTTGCTCTCTACACACCGACTTTCGACGTACCATCTGTAGGTAGTGTGGGATAAATTT
TTCATAAGTGAATTTGTAGTTTTGTTTCTTAGGTTCTTCACAACCACGTTCTCATGTATA
TATTCTGTATCGCCGCTTGGAAGTTTTGGCTGACTTAGCTCCAGTACAATGTTCATTTCT
GGAGTATTTAATCAAAAACTATCACAATTCATGGAACCGTGCCTATAAACACCATCCCCC
TCCCTCCCCCTCCCAACCCTAGCCACCCAACTCCCTCCCCCTCCCTTCCTCGCCGCCGCG
TG