morexGenes - Barley RNA-seq Database

Contig contig_1583723

Source Contig contig_1583723

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1583723 (2891 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_1583723

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_19157	1	658 bp	MLOC_19157.1	Available	Available	None

CDS Structure of MLOC_19157

Contig Sequence (2891 bp)

>contig_1583723 2891 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGTTCTCGAAGCACATGAGGCCGAACCCCACCGCAAGCTCGGATTAA
AAAAGGCCGTCCGCGATCACTGACGCGTGACATTAAGTTGATTGCGGGTAGTTGGACGAC
CGGAGGATGTGGATGGGGCAGACAACGAGAGGACGCGCGCGTGTCCGCTTCACGTACGCG
CCGACGTATTTCAGTGCCAAATTTGGACGGAAAATGGATCGTCACATATGCGTTTTGGCA
ATGAATCTGTATGTTGGGTCATCATTTTTGTCCACATAGGCTCAAAAGGATTATGATGGA
CAAAATGGATCGTCTTCGTTGGAGTTGGTTTGACGGACCGTTCATTTGGGATCTAAAGGG
GTGTTTGTTTATGAGGATTTTTTTGTGTGAGGACTAAAAGAAGTTCCTTTTAGTTTTATC
TAAACGAAACATGAGTGACTTTTAGGGACTAAAGAAAGAAATCCCTGAGGAGAGTCTTTT
CGGACATTTTATGATTTTTTCCAACAATGCTCGTGTTTTTACCATGTCATTTAATTACCT
CTAGTCCATTATTAGGGGTAACATGATTTTTTTAGCATGTCATTTAATAACCTTTAGCTT
ATGTTTAATCCATGAAACTAAACAAATATAGACCAGGGACTTTTTAATTAAGATTAAAAA
AATAAAGAGTTTTTAAACAAACATGACTAATTCCGTGTCATTGGCGGGGGCAGGTGTGGG
GAGGAGGCGAATGGATATGTTGGATTGCTGGGTGGGCGTGACTGAAGTTTACCGCCAACC
TTTCTGCAGGCCCTTTACTGCGGGAAAGGAAACAAGAAAAGTGCACTGGGTGATGCTGCT
GGCGCGCTTTTGGGTTGGCAGCGCAACAGAGCACGTGTAGTTTGCAGGATTATCGCTCCT
TGCTGCCTCCTTTTGCTTTCTTACAGCACATTATTAAATGGACCAAGTCTTTTCGTCTTT
CTCCCGACGCCGCTGTGGCATGGCAGACATCTCTTTTTTCCTTGGCTAGTACTATACCAG
CCACCTTTTACAGGGCTTTTGTGTGCGCAACTGAAAGACTACCACATGTGACCAGAACTT
AATATCGGCTTTTGGTGGTACTACTTTTGGTACTACTACGTCGCATGCTCCAACTCAACT
CAACCGGTGCCGCCGCTGGGTACGTACGTACTACGTGCGAGCGTTGCGGGCCAGGCCAGT
AGTTGTCGTGTCGCACGTATGGCTCGCTCCATGTCACCATTCAGCCTTTTCTTTTTGAGC
CTTTTCCTTTTTCGCTAGAGGCGCGTCGCAATTGATTCGAGGGAGGGGACACCATGATGG
CCTGCTCCAAAACCATTCATCAGCCGCTCTTATTACGAAGCTGATAGCCCAGACCCAGAG
AGGTCCCTGGTTAGGTTAGCCATCCATGTACTCGTATCGTATACACGCACACCCGTCAGT
GGCAGAGCAGCAGAAGCGGAGAAAAGGTCCCAACCCCCAACAATGGGAACGCTGACGATG
GAGCAAAGCGAGAAGTGGCAAGTAAAACCGGAGGCAAACATAAAGTAACTTTGCAAGCAA
TTAAAGGCGGCAGCAAAAGAGGGGATGGGGACTGCCGCTCGTTCAAAGGCATCCCCACCC
CCGCCCTCATTGACCCTGACAAGCTGACGGTTGGAATAATTATCTCCTCCGGCTCCCGGT
CCTTTTGGGAAAAGCCTCAATGTATCTTTTTCCATGGCATTGATGAGCACCACAGTAAAC
AAGCCACCAGTCAGGTGCCTGTCCATTTCTCTTTCTCTTTCTCTTTGCGACGAAACTTCC
CAAGGGGAAGCCACAGGTTCTTGATGGCGGTGAAAAGCGGCTCTCCCAGTTTACCGAAAT
GTAAATGTGGGAGCACCCACTTTTGTCCTCCGCGAGAATCAGCCTACAGCCCACCACCGG
TCGGAGCTCAGCGCATGGGGATTGAAGCACGTAAGTACCGTATCGCTCTTAATCAATTGA
TCCATAATTAACTGGCGCAAGTAGTACTGCTTGCGCGAGCTAGCCACAGGCTCTTGCTGT
ACGTCTTGTATCCAGTTAAATATACCAGGCAGCGCAATATACGATGTCCGTGCGTGCGAC
GATAATGTGAGAGTACACTACAGGAGTGGTAAGTAGAGTAGTAGTATATTTTTTGCAAGT
ACAATCACCACAGATTTACTGCTACAGAGCAAGACGGCGTCGCCACTCAATCGCTCTCAC
CTCACCAGCTGCCGAAGAAAGATGGAACTTGGCCATCATCATCAATCACCCGTTGGGCGA
GGTGACGACGATGATTGACGAGCGCTCGCTTCCAAGATGTGGGATGCGGACAAGCATGGG
ATGGCGTCACATTCATCGGAGTCATGAAAGCCCACGCATGGTCGTCACAACTCACAAGTA
TACCATGGGAATGGGACATGTTTTTGCAACTTGATGCTACTACCGCGCAACCTGATCGGT
TCCATTTTACATTGCACAGGCGACGCAACCTGATAAACCAAGCCAAGAAGAAGAAACCAG
GGGAAGGAAACAAACTACTGGTACTTAGGAATTGATGACAAGAGAGAAGCTAGCGTAGCA
AATGGAAGAAGGAGCCGCCTTTTTCCCTGTCTTGTGTAAGGCTTCGGGCACAAGCTAAGG
CTTCCCGTCGCGTCACGATTCAGCGGGTCAAACCAAACTCTATCTTCCAAGCCCGAGTCT
GTTCGATCGGCCGGAGACGGATCGATGAATGGTGGGCGGGATCAGAAGCGGGGGTCCGGG
CCGAGCTGCCACCGGTCGGCGTAGACGGGGTCCGGGCCGGGGGGGGAGGAGGGCGGGCCG
GCGGTCAAGGGGGAGGGGCGCGAGGGAGACGGGGCCCTGCCTGCAAGGTCCGGCCGGGAA
CGGGCAGATCG