| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location | No map location |
Predicted Genes from contig_1583544
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_19118 |
1 |
821 bp |
MLOC_19118.1 |
Available |
Available |
LOC_Os01g03380.1, FRAME:+1, EVALUE:2e-34, 13101.m00289 protein BBTI6 - Bowman-Birk type bran trypsin inhibitor precursor, putative, expressed |
CDS Structure of MLOC_19118
Contig Sequence (3553 bp)
>contig_1583544 3553 assembly3_WGSMorex_rbca.fasta
AGGAACGGAGGGAGTAGTATCCAGGCAAGCAGCCATGCTTGCACGTGATGCAGACATGCA
TCGGGTCAAGAATAGTCCGCCACGTACGTGCTTAACTATGGGTGCACGACATGTGAAATC
GTGACTCATTGAGTGCACCTTGTCGGGGGTATCTGCGTATGTACTCCCTCCGTTTTTAAA
TTTATGTCTTTTAAAAGATTTCATTAGTTATCTACATACGAAACAGAATAAATGAATCTA
TACTTTAATATGTGTATATATTCGTATGTAATCCATTAATAAAACTTTAAAAAAACTTAT
ATTTAAAAACGAAGGGAGTACGACTAAGTGAACGACATGACTACAAACATCCTGCAGCGC
CGCTATAATAAATAGGGACCGGCGACCGGAAGTTTCATTTGCACAAAGTTAGCTGCCCCG
TATGTACATTAGGCTAACTAAAAAAAAAATCAAAAGAATGGAGCTCATGTGAGATATAAC
ATTTTATAGAAAGGTTTTTTGGATTTCAAATAATATACATAGGTACAACAGCTACAACAG
CTCCTCCGATACCAGCTTCCTCTATCACAGGATACTCTCCCCTTAGCCAGAAGAAACATA
CAGTGTACAGGGACGAAGGCAGCATGCATGCATAGGGTGTAAGTTTGTTCAGGAAGAGAG
CGAAGTTTATATGAAATAAAAAAATTTAAATGCAACAACTACTATCATAATAGAACAATC
AATTTATTAGAGGGAGTCTAGCCGCCCCACCCCCCAGATTCGTCCCTGACAGTGTAGAGA
CGCAATTAACGGACGAAACATTTGGTTCCAAGTGTATATACATCCTATACAAGAAAAAAT
AGCAATTGAATTAAAGGTCAACAAATTCTAAAAATATATTTGACCTTTCCATTCTATTTG
TAAAAAATAAAATACAAAAAGGAAATTACACGTTGACGTCTTTTCAGAAAAGACAATTTT
TTGGTCTTAATAGTATGAATAGTGACTTATTATAGCAAATAATTTTACCTTTTGACCAGA
AAGTCAATGTTGATTTCTTTTAAAATTTCTTATAGTAGCGCAAAACAATGGCAACTTTTT
ATTTATTTATTTAATTATTAAAAAAAATATCATATGAGATGTATATACAATCAAGAACCA
AATGTATTTCTCCGCGATCCCGACGATTTCGTCGTCGTGTGCATGTGCAGTTCATCATCA
GTGTGTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTGCACTAATGAACTACA
TACACGTATGTAGTTCATTAGTGCAATCTCTAAAAAGACTTATNNNTAGGAACGGAGGGA
GTACAATACTGCAATCAAGCGGGGCAACGTGCGCCTCGTGCATGCATGTACGGACTTTTA
ACAATCTGTCTAGTCATCACTCCACGCATATGCCTTCGAATCTACATGGTCCTTATCCAC
GCATATGTGCTAGGGAGCCGCCATGTGTGCGTATTCTAATCTGCTCGCATGTAGCGATTT
CCACGCGTTAGGCGATCCGTCGGTATCAGGGCACGTACAATAGTTTAGATAGTAAATCCG
TCTATAGCAGTTCTCCATGTCACGAGGCTACATATACAACTGCCTGTTACCTACACAGAT
CCAAACTCACAAGCAAGCTCAGTCAGCACGCCATGGTGACGATGAAGCGATGCATGGTTC
CTACCATCCTGCTGATGCTTGGGCTGCAGGCAGCCCAGCTCGTCGCCGGCGACGATGTGG
GCGCCATTCTCCTGCCGAGCCAAGCCCAAGGTACGTACGCCTGCGTCAAACCGCTTTCTT
CCTCTAGCTAGCTTGTTCGTGGCTTCATGCGGCCATGACGAAACCGTCAGTCCTTCACAA
CTGAGAGCTTGCAGGCGAAGCAGCCATGGCGGCGGCCAAGAAGAGGCCATGGAAGTGCTG
CGACGAGCCCTTCTGCACCAGGTCGTTCCCTCCCATCTGCACCTGCATGGACCAGGTCTT
CAAGTGCCCCAAAACCTGCAAGTCCTGCGGGCCGTCCGCGGCTGACCCGTCCCGCCGGAT
CTGCCAAGACCAGTACATCGGCGACCCTGGACCCATCTGCCGGCCGTGGAAGTGCTGCGA
CAAGCCTACCTGCACCAAGTCCAACCCGCCGACGTGCCGCTGCGGCGACGAGGTCGACAA
GTGTGCTCCGACGTGCAAGACCTGCCTGCCGTCCAGGTCGCGCCCTTCCCGCCGCGTCTG
CATCGACAGCTACTTTGGGGCCTTCCCGCCACCGTGCACGCCCCGAGAGGCCGTCGCCGC
CGGCGGCAAGTAGCTACCGCGCGCGCGTACGCGCTGGTCACCCGATCGATCAGCGTGCCG
TTGATCGAATCGCCACGTCGTCTGTACTGCGACCTCGCTTGCAGCAGCAGCGCTCTGCAG
TGGTTGACAATATAATAAACATGTTTCTGAAGAAATATTGTTTCGGTCTGGTCTAAAACG
TCTTACATATAGGAGTATATATATATATATATATAAAAGCATCTCTCGTCCAACCGCCAC
GTGCTAAAATGACTTTACAACGTTGAAATAGAAAATTTTAGCTCTATTTTAGCGCGCCGG
AATGGGTTGGCTCCAGCGGCGTCGTGCATTGCACGTGCGAACCGCCTCCGGCGGACGCGG
TAACACTCAGCGCGCGAACAGCTGGCGCATGCGACTTATTCATTTTAAAAAGACAATATG
GATATTTCAAACATTAAAAAAGACATAATATAGTTTAATTCCACGACGTATCAACAATCA
TGCCACATCAACCAACCAAGTTTAAAATCTACCAGCCAAGTTCATGACATAAAAAAATTC
TAACAAAGAAATGACACATCAACAATCATGCCTCATCTTCGTTCTCCTCTTCCTCCGTTT
CTTCATCCTCATCCGAAGACGATTCTTCTTCCTCCTCATCTTCATCATTAACGCGCGCCG
CATCATCATGTGGAGCTCGGTAGATATTGGCAAGATCTTCAACTGCATCATGTGAAGGTA
TGTGAGGAGGCACACCGAAAGACATGTGTCCATCCGGAGGTGCTCCGATGCCTTCCATGA
GAGACCCAAAACTCATGCTTTCCATGTCCCCATGACAGCTCCGAAGCCATCCATGCCTTC
CATGCCGTCCATGGTAGCTCCGAAGCCACCATGCCTTCTATAATAGCTCTCATGCCTTCA
ATGGCCATACCTCATTTTTGGACCAAGACTTCTTCTCGGACAAGCTTGACGTGATGAACA
ACAAGTACTTCTCCCATCCGTCGGCGGTACAAACGAGCACGCCGGTGCTTCGGTCGCCGT
CGCACGACGTGCAAGTTTCTTCTTCGATGGTCTAGTGGAGCCATCCGCCGCCTTGTTCTT
CTTTCTGGACACCTTCTTGACGGTCTTCTTCACTGCTAGCGCATTTGGAAGCTTTGAGAG
GGGGGGGGGGGGCACGGGTCACATCGGGCGCTGTAGCGCCCCCACCCCCCGCGGCCGTCC
GTCGCGCCATGAAAAGGCTGCGCGCCACACCGGCACTCTCAGGGGCCCCCGCGGGGCGGA
CACCACACCCACC
