Contig Data
morexGenes
Links



Map Locations of contig_1583394 (3163 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1583394

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_19075 1 758 bp AK364142 Available Available None
MLOC_19076 2 1168 bp None Available Available LOC_Os03g53200.1, FRAME:-1, EVALUE:3e-75, 13103.m05808 protein OsCML4 - Calmodulin-related calcium sensor protein, expressed





CDS Structure of MLOC_19075






CDS Structure of MLOC_19076






Contig Sequence (3163 bp)

>contig_1583394 3163 assembly3_WGSMorex_rbca.fasta
TTTATACATCCGTATGTAGTCTATTAGTGGAATCTCTAGAAAGACTTATATTTAGGAACG
GAGGGAGTAAAAGCATAATCCCTGCATTGTTCTGACGTCTTTCCTTCATTTTCTAGGTTC
TTGAGGAAGGTGTCCTAAACCCAGAATCAACTGTGGTTGCAATCTTCCCCTCTCCAATGC
ACTATGCTGGGCCAACTGAGGTGCAGTGGCATGCTAAGGCTCGTATAAATGCTGGTGCAA
ACTTCTATATTGTCGGAAGAGACCCTGCTGGTATGGGCCACCCGACCGAAAAGAGGGACC
TTTATGATGCTGATCATGGGAAAAAAGTACTGAGCATGGCTCCTGGGCTTGAGAGGCTCA
ATATCCTTCCTTTCAAGGTGTGTAATCCTTCCAGGCCAGACACCCCATTCTGATCTTGCC
ATCAATATGTTTTACTCAATGTCGAAATACTATTGTTTTATTCTGTTTTCTTGACATGTC
TTGTCATTCTTATTTTGGATCAGGTGGCTGCATACGACACAAAGCATAACAAGATGAATT
TCTTCGACCCATCAAGGAAAGAGGACTTCCTGTTCATCTCTGGCACAAAGGTAATTCATT
TCAGTGTCATTGGCACATCACTTAACTCTGGCCCCAACATTTTGTTAACCTTGTCCTAAC
AAAGTTGCCACTGTAACACAGATGCGCAGCCTTGCCAAGAATCGCGAGAGCCCACCCGAC
GGTTTTATGTGCCCGGGTGGCTGGAAGGTCCTCGTCGAGTACTACGACAGCTTGGCGCCT
CCAGAAGGCAGCAGCAAACTGCGAGAGGCGGTTGCGGCTTAGAAGCTGAAAGACGCCTCG
GATAAGTAGTACCGATGTATCTCGTGTCATGAACCAATGATATATGATTGTATATTGGTG
GTAAGAATCGACATTTGGGCATGAACCCCAGCACTCCCCGTGTGGTTTGTACTGCATACT
AGTATCTGCTAGCAGTGTTACCCCCGGAGCCCATCATGTGCTTGTGGTGCCAATAAGGAT
GGGTTTTGTATCCTCTTTGCCAGATCTGTACATAACTACATATACAATATTGTGGTAATT
TATCTAGTGCTTGATGTGTTTGCTAAGATCTCTTCTTAGGTTGATGTTCAGATTTCTCTT
GATTTTTAGTTTCATGGTGTTATATTTTTCACCTGAATAAATGGCAACATGAGAAGGAGA
TGATCAAGTGTAAAGAAATGAAATTGACAAGGTCGATTCTTGTAGGGACTGCCTGAGTTC
TTTTTTCTTTAAACATGTAAGAGTTTGTGTGGACCGTTGGATGATCCAATTTTGTGTTCC
TCCCGCTTCTCTCTCGAACCACCGCAAAGGAAACTGAACTAAAAGCATTTAAAAAAAATG
GCGATAAATACATCTAATCTGGCGACTAAGCTTTTTAAAAATTCGACAATCAAGTATTTG
TAATCTTGCAACTAAACATGTTAAACTTTTTTGATTACTAAGTACTTTGTATGTCTGGTA
AATAAGTATCGGTTCTACCAGAGGTCCTCGCATGAGCTACAATGGACCTAACAACTACTC
CCTGTGTTCCTAAATATAAGACATTTTAGATATTGTACTATGAACTATATATGGATGTAT
ATAGACATATTTTAGAGTGCAGATTCATTCATTTTGCTCCGTATGTAGTCTTTTAATGGA
ATCTGTAAAATCTTATATTTAGGAACGGAGGAAGTATAATAGATAAAACAAACACTGACC
ATGGGATGTACATTGTAAAAAGACATAAAGGTGGCTAGCATAACTTCCAAGAACCAAAGA
ACGTGGTGTAAATATATGTGGCAATTGCCGTTATGTAATCTTATTACATATAGTGCACAA
ACAGCTTCTAAGATAAATACACAAGCTTACAGTGGCTTCAGAAAGTAACAATTCGACAAG
CAGTGAATTTACAACGAAGAACCAGTGGTTTTGCATCCATCACCAGCATTTAGTTTTGTT
CACCCGGTTATCTTGCGCTCGGCATTCTTCATAATGAGCGCAAATTCATCGTAATTCACC
TGCCCGTCGCCATCGGTGTCCGCCTCCCTGATCATCTGCTCAACCTCCTCGTCGGTCATC
TTCTCCCCGAGATTGATCATCACCGTCCTCAGCTGCATGTACATGGGCAAGATGAAACTA
AGCAGTGCCTCAAATGAGCTTGTGAATTGTCTGAACTTGAGAAGAGGGTGCCATTATATT
CACCTCAACAGGGGAGATAAATCCATTTCGATCCTTGTCCAGGACCTCGAAAGCTTCCTT
GAGCTCTTCGTCGGCGTCTCCGTCCTGCAATTTCAGATGGAAATCGAAAGCAGCAGCACG
ATCAGGCACTGGCAGGCCCAGTTTGTCAAACAGTAGAATCAAATCAAATCAAACAGGTGA
TTGTTCATTGGATTGCAGAGCTTCACCTGCATCTTCCTGGCAATGAGGCTCAAGAACTCC
TGGAAATCGATGGTGCCGTTCCCGTCCGTGTCGACCTCGCGCATCATGTCGGTGAGCTCC
TGGTTGGTCGGGTCGAGGCCGAGGGAGCGAGTCACCGTGGCCAGCTCTTCCAAGCTGATG
CATCCTTCATGTCACAAAATTAATGTCCCAATATCTCACATGTCAATCATGTTCGAAAAC
TCTGTTTTCATTTTAGGTCTGCTCATGCTTATCCTGATCCCAAATGGGCCAAGACAACAC
CACGTGCGAAGCGTATGGTCAAAGGTTTTGACCAAGATATGATAAACTGGAGCACTACTT
AAATGTATGTGTATATGAGCAGACAGGTGTGTGACAAGTAATGTCACCACAGCCATCACA
AAAACAGGTCTGGTTCTTGATGGGCAGGGGCATGGGCAGGATCACAAATGAGCCAATAGC
AAGCACTTGTTCTGAAATGTTCTTTGACTGAACTTAAGTGCTTGTTTGCTACAGTACAAT
GGTCTACATAGGCCCTGTTTGGTAAGCTAGAGTGGTTAGAGTTAGTTTCTAGCTCATGAC
TAACCCTAAACTAACTCTAGGCAAATAGGTGTTTGGATGGAAGGGTTAGATTGATAATAG
ATGCACTTTATGGAAAAAGAAAAGTGATTTTTTAATAGGCCCCATGAGAACTAGCTTCAA
TTAGCATCTCTTGGCTAGTGGGAGAGAGAGAAAAAAATATTTT