Contig Data
morexGenes
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Map Locations of contig_1582892 (4676 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1582892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18966 1 2301 bp MLOC_18966.1 Available Available LOC_Os09g04990.1, FRAME:-2, EVALUE:0.0, 13109.m00438 protein cytoskeletal protein, putative, expressed





CDS Structure of MLOC_18966






Contig Sequence (4676 bp)

>contig_1582892 4676 assembly3_WGSMorex_rbca.fasta
CGTTTCAATCAATTTACACATATGGATCATCTTCAACGGAGCTACGGTTNNNNAGATATG
ATCACCGCAAGATATAATGTCATGAATGCAATATGTATGCAANGACAGTCACAAGCATCC
CAAAACATCCAAACAGCAGAATATGATGAATATACACAAGATTCTAAACAAGTTACATAT
AAAACACAATCAAAAGGAACGGTTCAACAAATACAAGCTATACAAGAAATAGAAATAACC
TAAAAAAACATTGCATTTTCTACACCCCAACAACCGAAAATGTTGTTCGGTGGACGAGCT
CCATGCAGCTCGCTATCTCGATCGTCTCTAATCTCATCTGACAGCTACAACGACGCATTA
ATGACATGTATTCAACCTCACAAGCATACATCACACACCGTATTCTGTATTTACACACAC
TAGCATCACAGGTTGGGCACACCTCGACGACAGGCTGGTCAAACGTGCCATCCACATGCC
CATCATCAATATGCAGTGCTAGCAGCTCTCACCCACAGCGATGAACATGCGCCAAATCTG
CTGTTAGCGACTACAGTATAAATCACCATGTAAACGTTTTATCAGTGTGTGTTCCAAGTT
TATCGATTTATGATCACCCTGTTCGCATGCACAGCTTGCCGACAAGTGAATAAACGTTGA
CATGACCATACAATAGCTCCATTTTTTTTTCTTTTTTGTGACATGGTTCAGCTGGAGGCA
GTAAATTGCATTGAGCAGTCACATCAAGGGTTAAACCTATTCTTACCAACTGTGCACATA
ACCGCCATCCACCAGCAGTAATTTTAACGTGTCCCTGAGAGCGTACAAACGACGAACACG
AGCAGCGGCACAGATGTATCTCTATTAAATATAATAAGCAGTATATAATTAAATGATTAG
AGAACACACATCACGATGTCAGAAAGGACGGACGCAGATAGCGGCCTCCATGCAGCTCGT
CCGCCAAAATGCCCCTCTAGTAAAAGGGCAGACTCATTGCTAAAAGTGCTAAAAGCTCCT
ACATGTAAGGTATAGGAAAGTATTATACAAGCTAAAATTGCAATGTAGAGAGGCCGCGTT
GAACCCTGCTCAAAACTACTCCCTCCATTCTTAAATATAATTCTTTTAAAAAATTTCAAT
AAGGGACAACATACGAAACAAAATAAGTAAATCTATATTCTAAAGTAAGTCTATATACAT
CCGTATGTAATCCTTTAGTAAAACCTCTAAAAAGACTTNTATTTAGGAACGGAAGGAGTA
GATCACTGTTGGCATAACTAAAAAAAACCTACACGTTTCAATTTGTACTCGACACAACTA
CACGTGTTTTGGCATACGTAAATGGGAGGGCCCATGAGATCCACACAAAGTGTAATTGAC
ATGTCGACCACCTATTCGCGAGAGAATTGCCTAAAAAACCCATTCGTGAGAGAAATGTGT
GATTATTTGAGATTTCTACTGTTCTGAAAATTTGACCGTGCAGCTGTAGCCTCATGAAAT
TAACTCAAAGTAACAAAAGAATATAGTACCAACTATTATTAAAAAAATACTAAACACAAA
CTTATAAAATACCTAAATGAGGATTAACAACACACATAGTGCAAATTAACCATCAATTAG
GCACAATGGTGTAAACTAAAATATGCCTATTTTTCCATCGAACCAACATGAACAAATCGA
TAGAGGAAAAAAAAACTAGTTCATAACTTAGCATCCATAGATTTGTGCAGGGGGGAAAAA
GAATCCCACACACAACATAAGTTGCCAACTAAACTGTACTTATCCCTTTGCATTGCACGA
AAAACGGAGTTGTGCATTAGTAATAGAAAATACTAGCTCTGTATAAAGATATACTCCCTC
CGTCCGATGAAGAGTGTACGTTTGGTTTTAAAATTTATCCACAAAAAATATACTTTTATC
TTTTCAATGCACTTTAAAATAGGAAGAAATGCTTCTTTCATCACACCGTAATCAAGATCA
TCAATAACATTATACACATAGTCTTCTTAATTTTTACATGCACTTAGCTCATTGGGGTTG
GATAATTAAAAAGGAAAGAGATGGTGGCTTACACCTTTCCAATATATTTTTTATTCCACT
TCATAATTATAATTTGTCCTAAAATATCAATATATACACTTTTCACCGGACGGAGGGAGT
AAGACGTTTTTGTAGGCTAGTAGCCTACAAAACGTCTTATATTTTGATATGGAAGGAGTA
CTATGTCATAGCTCTCATATGAAATTGAACTGAATTGAAAGTTGAAAATACTATTTATTT
CCTGTTTCTCTAGAGTCAATCCAATCAAAGATGCGGTTGAAATAACTAAGAAACAACTAG
TCAATCTAGGGTGTCACAATCTGTATCACTGCTTTGTAAAATAATGGATAAGGCTTAGCA
TTACATTCCAAGATATCATTGCAGAGAACGTTTAGCGAACGGTCTTGAAAGTGGTTAACT
ACTTCAAAGATCTCCATCATACACCTTTGAAACCGGGCCCAAAAAATTATCAAAGAAATG
AAGACACATGAAACAAATCAAGATTTTCGAAGCATGTGAAGTCCACACTAGTTCTGCAAA
TCAAAAAATTTAGTATGCTAATAATATCTAAATTGGCAGTCATGATACCAAACCATGAAG
AAGTTATCAAAAACAAATAATGCCTATCAAACAATAGAATACGACAAGCATCGATTTCAT
CTAGCTTGAACAACGAGAACTTAGCTTTCAACCACAGATTCATCATCAATGTTGTCACTT
GTTTGGGAACTTCCTGTGCCTGAAGGCATAACTTTCTTCTCTTCGGACTCAGAGACTGCA
TTGGAAAAATGATTCTTCAGCACCGTGGAGATATCTGATTCTGAAGCTCCAGCCAACTTA
AACCTTTCAACAGAAGCATCGAGGTTCTTCTTCCAATCACCGACAACAAGCTTGAATTCC
ACTTGAGAGCGCTCAAAAAGCATATTGCCCCAAAATAGGTGAATCTGTTGCCTCATTACA
GCTGCCTGTTCAGCTGCCTCTTCTGGTGTCAACTCCCCTTGACCATCTGCACTGTGTTGC
TTCTTTCTTTTCTTCAACACCTCATCCTTCTCGGTCGCACCAGGTGTTTTTAACTCTAGC
ATTCTCTGTTCTTCCACTTTCTCCCACATCTCTGTTGCAGCCCTCATCTTCTCCTCAGCA
CTATCAAAAAGCTTTAATGTTTCTGAAGAATCCCAGGTAGACAGGTCAACCTTGTCTGCC
AACGCAAATGACCAGTGAAGCTTTGCAGTCTCAAAGTGTTGCTGGCCTAAAGCAAGAAGC
CCTTCATAGAAATCTTGCTTGATGTTCAGGGCCTCCTCATACCTATGGCCTGCAAGAGCA
TACATCTCTAGCACCCAATCATAAGCTGTGCGGAGCTGAGCAGACATGATTTCCTTTGGA
GAAGATTCATCAAGAGGGATGCGCTTCCTTGCTGCACACATGTGCACATTTCCCCAATTA
AATAACGCCAAGGCAGCGACCTCCTGGAATTTTGCTGCAGCCATCTCAAATAGGGATTGG
GCCTCCTCGCTGGTCACTGTTTCCTCAATTGCTTCAGAGCACAGCTCCATTCCTAGTTCA
TGAAGGTCCAGATGTGCATCAGCATCAATCCCAACCTGGTTTCGGAACAGTTCTGCAAAC
TGAAGCAACCAATCATCAATCTCAGCTTCCTTGCACTCAGCATGGCCACAATCTTTCTTC
CTTGACAGAATGCTCTGCTCAGCAACTCCGTTCTCCAGATCTGGTTTTGCCACCTCGACA
TTAGCTACCTCTGCAGAAGTATGTGAAGAGCTATCCTCACCGGTGATCAACAACTCCTCC
TCCTCCAGCTTCTGCTCTTCTGTTGGCAGAGGCTCCTGCTCTGGATTTACTTCAACAATA
TGTAGCCTCAACACGGGGAGATTATTATCACCTTCCTTTACATCCATGCCAACACCACAA
GCCTCGGCCAATCGGAGTTCTGATGTGCAAGTGATGGTAACTAGATCACCATCGGCATCC
TTATACTTCATCAACACCGCCTTGGATGATGGGAAGCGCTTCGCCACAACTTCCCTGAGC
TCATGGAAGCTGCATTTTTCAGGCATCTGCCCAAGCCTAATGTCATGGCCATACACCAGC
TTGAGAGGCCTCCATCTCGTCACAACCTTCCTGTTAATGAGCGATGTCTCCGTCACTGGT
TGGGTTGAGGGCACTGACAGCGCTGGCACAGTCTTGTGAGAAATATCAGCAGTTGAAGCC
TTGGCAGAAGATGACGGAGAGTTGGAGAAGGGCACCAACTTGGGCGCTGGCGAGGAATTA
AATTTAGTCATCGCAGGAGCTGGTTGCTGCTGCGGAGGAGGAGGCGACGGAGGCGATTGT
TTCTTTGGGAAGGGGCGGGAAGGGAGGGATGGGCCAAGGCCGGCCACAACGGCCGAGGCA
CCAAGGGCGGCGGGGGAAGGGCGGCTGGTGGGTTCGTGGGTGGAGCCGGCGGAGGCCGAG
GAGGAGGACGAGGAGATCCGTGACCGAAGGCGGTGGGACAGGTCGATAGCGTCGCGATGG
TTGGGGTCGAGGGCGAGGAGCGCGAGGGTGTCGGCGAGCGCGAGCTCGTGGCGGCCGAGT
GCCTCAAGCGCGCGGGCGCGGCGGGGCTCCGCCCGCTCGTATCACTTCGTATAATG