Map Locations of contig_1582850 (3836 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1582850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18957 1 462 bp MLOC_18957.1 Available Available None





CDS Structure of MLOC_18957






Contig Sequence (3836 bp)

>contig_1582850 3836 assembly3_WGSMorex_rbca.fasta
AACACCAAAAGTCGATTAGGGGCATAGCATGCACTTTCAAACTCTCAGAAATTTCCCCAT
GGCTACTCCATCATCTCCAACATCCGCTTCCACAAAGCTACCAACGAGGTTCCCAATCTC
CTCTGTCGTTCCTTCATTCATCATCCCCAACGGGAGACTGAATACCCTCATCCAGATGGG
TATCTCAGTGAACTCATAGTCCTCCGGCCTCTTCCCCGGATCATAGTCCTCCACTACTAC
CAGATCCTTCTCAAACATCCACGGGCCATCCTCCAACGCCCTTCGTTTCCCCGATTCCTG
GTGGAACGTGAACACAAACAGGTTCTCCCCCACCTCCTTACATTCGATGCCTTTGATCGG
ACACCACACACGCCCCAACGAAAGCCGGATCGCGTCGGGGTGAGCCAGCTTCTCCGACAA
GACTTTCCCTACCGCCTGCGCCACCGGGATCTTACCCCGCTCCTTCCCCGATACCCTGAC
CTTGACTCCACGTCGTTCTTCCTCCGTCAACCGCAACCCCCGCATCAGCCCATCCACCGC
CTCCATCTCCCTTCACACTCCTAGTCTGGCCCGAATTAGGGTTTAAGGTGGTGTACGACC
GTGCGACCCCAAGCACACGGAAGGCTGTGAGGTGGTGATGGGATCTACTCTCCGTCAGGA
GGAGGGTGGTAGGCTCGGCGCCGAAGATCAGAGATCCCGCCGTCGACCTAGCCAGTCCTC
GCCCGAACCCGAACCGTGATCGCCTCCATAATCCGCGGAGCACCCTAACCGCCACACCAG
GGGCAGACGTGAACAACGTTTGCATTTTTTTACTACAATAGCAAGTGCGCAGACCAATTT
CCTGTGTAGTCATTTGACTACAATAGCTGGAACTGCCTTCGCCACTGGTGCTAAGGGTGT
TTTGTTGTCTTAGGAAAAGGTCAAGATCAAAAGATACAGTGAAATTAAAAATGCTCACAG
ATTTATTTATTTTTACAAATTCAAAAATTATCCGTGAATTTACAGACGTTCGTGAATTCA
AAATATCTTCACAAATTGGGGGAAATGAATTTTTAAAAATGTTAGTGAATATAAAAATGA
ACACAAATTTAGAAAATGATTCAAGTTTAAAATAATGCAAAATTTCAGAAAATCTTTATG
AATTTGAAAAAACGTTCATGATTTTTCGAAAACATTTGCTAATTTAAAGAATAGACCACG
AATTTTATAAATCACTAATTTTGAAAAAATAAAATTATTTACTAAATAACATGAACTCCA
TGAAAAAATAGAATGGTAAATAAGCTTAAAAAATATATGAAAAACATCCGAGAAACACAT
GGAGACCTTTTAGAATGTTCTCAAAACCAGAAAGCCTACCTATGTGTACATGGGCCTGCC
TATTAGATAGCCTACTCAAAGCCTCAAGAAACACTGGTATATGGAAAAATCTGATTCCTG
TCCTGTGTGTGGAAGAGAGGAGGGATGGATACTTTGCGTTCGGCAGCAAAGTTTTTTTAA
GTTTTTTATGAATACTGCGGTTTTTTAAAAACACCACGGTTTTGAATACTTTGATGCTTT
TGGCTTCAGCAAAAAACAAAGAATCGTAAACCACAATATCCCAAAAACCATGGCATTTCT
GGAGTATCCTGATAAGAGATACCGACCTCTTTTTTAAAAAAAAAAAAACAGAACGGACTT
GTGCAGCCAGCCACCGTTAGCAGCCGCTAATTAGTTAGTCATCCATGCTAAGTACTTGAT
CAAAACTTTGATAAAACATCATCAGCCAAACACATGTAAAACTGAGAAAAATATTGATTT
TAAGAAACTGTTGTATTCCTTGCCCGTCGATGGAAATGCTTTGGTTTTCAATAACCACAA
TTTTCTAAAAACTTTGCTTCCAAACTGGGCATTCAAAAACCAGCATTTTTTTATATCTTT
TTGGTACATTAGAAATACGATTCGAGGCTGGTACAGATTGCTGGAAAGTTACGACTACGA
GTACTCCATTAAAGCTAAATAAATCGCCTGCGTCAGAAGAAAAGCTAAATAAATCGCCAG
AAGGTAAACAACCCAAGCCGAGCCGGCGCTGTGTTGGAAGCGTCCGGAACTCCGTATGTT
GGTTGCGCCCATGTTGATTTTCGCGTGTTTGGACCAGTGAAACGATTTGGTCCATTCATG
TGTTCTTAATCTGTGCAAGGTGTGGTAATTTACCAAGTGACTTGCACTGCCGACAACATC
AAAGTATTTGAACACAAGTGGTAGACTTTTTAAACGAGAAGCCACAAGACCACCAATTTT
TTTCATTAAAAAGAACCATGATAAGGGAGAGCACATGAAAATAAAGAATCTCCATTTAAC
TTATTCCAGGAATCAAAGACAACGCAACATTATGTCCTAAGCTCATTCTGGGTCTTTTTC
TTGCTACAAATTAGAGCAACCACTGCGGACTGAGCAGTCTTATCTAGCTGCAATAGCAAC
TACCGTCTTTATGGCAAACCCCTGTTCCGCAGCCCAGTTTTTTGCAGGCAACAACACAGC
CTTCAGGCATACAATTGTACTGGTAGGGTTCACGGCCCGCCCACGCGTTGGCTTTTATAC
CTATGAAAGTCAAAATAAAAAAGTGAATCACAGCCGAGATCAGTTCGTAGTTAAACTCAG
ATGCTATGGAAAAAATGCAGTATTAGGAAAATATCAAGATACAAGAGGCGCGCAAATAGA
AAAACGGGCACAACCAACTAGTGGTATGTTATATCCCATCGGCAGTTCAAGACTACTATC
AAAAACATGTATTAAGATATCTAGCGCGGCAGTAAAGGGGTACTAAGTACTGTATGAAAC
ATGGGCAAAACAATCATGCCATTGCTAGAATTTAGATCGAATAACTTGAGTAATCAGTTT
ATATTTGCAGTATGAGGAATGTCAACTTTGAAGACAACTAAAAGCAACAGAATGTACCAT
CCAACAAAAACATGCAATAGATTCAGACTTGTCTGTACTGTATCCATGGGTGCAGCAGGC
CATGCAATAGATTCAGACTTCTCTGTTTTTCTTTGGAAGCCCAAACCGTAGAACAAAAAG
TAATATGGCGCATTTTATAAATTAAAAGATAGTACAAATAAAGGTTCAAAGAACTACAAA
AATTAACCAATTCCTGCTCTAGGTATTACTACAAAAATAAATGTTCAAAGACTTCTCTGT
AATTCATAAGCACCCTCAAAGATAAAAATCGGCCTTTAATTATAAAAGTGGTAGAAATAT
TATTTCCAACTAATACCATTGGAGACAGGAAAATCAAGCAAAAGGATAAAATCTGGCTCC
CGGAAACCACGAATTTTCCTATAAAGTTGATAAGCTCTCCTGGAAAGAAATGTACCTATG
TTGTTCGTCCCTGATACTTGACTCGACAAGCAAGCGGTCGAAATCAGCAAAAGAGCCATC
AAGCACACAAACCTTGAGTTGATTAGAGCCATAACGAAGTTTTTTACTATTTCCTTGATT
CCTCCTCCTATTGTATTTTTGGTCGTTCTTGTGGTGTTTAGTTGGATCCTTGTGCTGCTG
TTTATATAGGATATATAGGGGCGCCTTGTAGTACCATTTTGTGCCATTTTATTACTTCCT
GCATTAGTGTTTCCTTTGTATGGTTCGCCAATAATACGCACATCATGGAATATCCTCTGG
ATATCAATTTATTCCCTCCAAAATATACCATACAAAATTAATTACTACTAGTACTATCCC
ATAACAGGATTATGTCAGTTATTGGCTCCAAAAAAGGCCAATCGCAGAACCGTTCGCGTC
GCCTCCAGGGGGGAGACTCGGGCGCCCTAGCTGCCGCCGCCCTCGACCTCCCTCCT