Contig Data
morexGenes
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Map Locations of contig_158271 (4706 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_158271

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18933 2 3981 bp MLOC_18933.1 Available Available LOC_Os05g43490.2, FRAME:+3, EVALUE:3e-171, 13105.m04581 protein OsFBX169 - F-box domain containing protein, expressed





CDS Structure of MLOC_18933






Contig Sequence (4706 bp)

>contig_158271 4706 assembly3_WGSMorex_rbca.fasta
CGGGGCACGCCCGCCCCTGCGACGGAGTGCGCGGCCGCCCCGCCGGGGGGGGCCCGCCGG
TGGCGCGGCGAGGAGGGGCAGCAGCCCCACCGCCTCGCGGCCGCGGCCGGGGCGCCGGAG
GACCGCTTCGACGGCCTCCCCGACCCGCTCCTCCTCCTCATCTTCAACCGCATCGGCGAC
GTCAAGGCGCTCGGCCGCTGCGCGCTCGTCTCCCGCCGCTTCCACGCCCTCGTGCCCCTC
GTCGACTCCGTCCTCGTCCGCGTCGACTGCGTCATCCCCGACGACCCCGCCTCCTCCTCC
CCGTCCTCCCCCACCGCCACCGCCTCCGCCCGCGCGCGCGGCGTCTTCTCCCAGATCGCG
CGCATGGTCATCGGCGGCATCGTCAAGCCCATCCAGGCCCTCGGCCAGATCCTCTCCCAC
GCCAACTCCGCCGCCGACTTCCCGGCCTCCGCCGCATCCCTCTCCTCCTTCCGCCGCTCC
TCCTCGCTCTCCTCCTCGTCGGCGCCCCACGCCGACGTCTCGCACCACTCCCCCTCCGAG
GTGCTCCGCTCCTTCAAGGAGCTCCGCAGCCTGCGCATCGAGCTCCCGGCCGGCGAGCTC
GGCATGGACGACGGCGTGCTGCTCAAGTGGAAGGCCGACTTCGGCTCCACGCTCGGCAGC
TGCGTCATCCTCGGCGCCGCCTCCGCCTCCGCCTCGCCGTCCTCTGCCGTCAAGGACGGC
TGCAGTACGGCCACGCCTCCTCCTGCCGCTGCCGCCGATTGTGGGGAGTCCGACGATTCG
GGGAGCATCCCGGAGTCATTCTACACCAACGGCGGGCTGAAGCTGCGGGTGCTGTGGACC
ATCAGCTCGCTTATTGCGGCATCGGCACGGCACTACCTGCTGCAGCCCATCATCTCCGAC
CACGCGTTGCTGGAGAGCCTGGACCTCACGGACGCCGATGGCCAGGGCGTGCTCACCATG
GACAAGTGGCAACTGCAGGAGCTACGGGTCAGGCCAGTATCAGCGTCTGGTGACTCCCAC
CGCACGCTCATGCCGGCGCTTAGCATGCGACTGTGGTATGCGCCACAAATCGAGCTGCCT
GGGGGCACGGTCTTGAATGGAGCAACACTGGTGGCCATCAAGCCAAGCGAGGAGGCAATG
AGGGACGCTGTTGGGAATGGAACTGCTGGGTCGGCAGGTGGATCCTGGGTTTCAGACGCC
TTTGAGGAGCCATATCGGACGGCCGTCGGTGTGCTTCTCAAGAGGAGGATGTATAGCCTT
GAGATGAATTCATTCTAAGCTATGGAAGGAGTGCCATTCCAGAAGTTTCATCTGTGAGAG
GTAAATTTCACAAAGGCATCTGAAACCCATTTTTTGCCGGATCAATTTTCTTCAAGTGTC
TTTGCTTCTAGGGAGTGATTCGACCTTATTTTACACGATTGTGACACTATCATCAGCACC
TCACAACTATTGTGATGCATTGCAGATTTGCTGTCAAGATTGTTATAAATTCTACAGTAG
TGTGTTCTGTAGTCAGAACATCAAATTTAGGTGTAGCTCATGTTAATATTTGGTTACTTG
TCATAAGTAGGAAGCAAAGTATTCTTAAAAATATATTTTATTAGTGGGTACTTTTATGGA
GTTATTGCCAAGGAGTTGTTTTAACCGACTGCTAATCTTTTCTTGGTTTTGGCTATTGTA
TATAGTAGTTTATACCAAATTTCCAAACTCAGTTTACATGAGTACATTGCTTGACTATCT
GTACAACTTTACAATGGGACTCATTGCGATCCTACTTTCCATCGCCTCTGGCAATACGTT
ATTGCACATATTAATATATTATATCCTGATAGAGTATAGAGTTTGGACAGGCTCCTGTTC
ATGATCCAGCAGTGACGTCTTCGGTGTTATAGCTTAAAGTTTTTTTGTGTGTGATAGCCA
TAAGCAAATAACCCTATAAACTTAACTAAAATAATGCAATGTATACTTATATAGATCAAC
AAGTGGTTTGCCAAATCATGATTCCTGGTCTCCCTTTTTTGCGATGTTGGAAAATTATGT
TGGCACTGATCATCATTCATCAATGATACTCCCTCTGTCCTAAAATAACTGNNNNNNNNN
NNNNNNNNNTCTAGTACAAAATTGTACTAAGCTCAAGACACTTATTTTGGGACGGAGGGA
GTACATGATATAGATAATTCTATTTGACTTGCCTGTGGCACTTAATCTATGTGGTGTCAA
TTCTTCTTCTGAGTTCCGACTCTTGAAAATTTGACTGACCGACCAAGTTGAAACCCAGAT
ATAAGAATATCCATCCTTCCAGCAAGAAGCAAGCAGGTTTAGCTGGCTAGCCTTCTTTTG
CTATGCCTAATATCTTGCATTTTGCTTATATCTACCCCAACCTGTCTTTTTCAGATGCTT
TTATCATTCTGATAAGAGCTGTACTCTACACTTCATTAAGGATTATCTTCCCCATTTTTA
CTTTGGATTTGCACAATTAAGGAATAGGAAATGGAGAGAGGGGGTGTGGGAGATATGGGG
AAGGCTAGGGGCTAAGGGCTAGTAGAAGGCAAGTGTGGTTTGAGAGAAGAAAGACGCTGT
GACCCAATCTGTACTTGTGGGATTTATTATTTCTACCCATTCTGATAAAAGCTGCACTGC
ACGCTCTTTAAGGATCATCTGTTCCATTACTAGTTTTGAATCGTTCAGTTAAGGTAGGAA
AAAAAGGGAGAAATATTAAGAAGTCTTGATGCTAGGCTAGTCAAAGGAAAAGTGTGCTTT
CTGGGCAAAAGACGATCTTCTTAATTGCATTGGTTACCAACTTACCATCATGTGTATCTG
CCGATATGGCCCAACATGCTATGTATTGCAGTCCTAGAATTAAGTACTTGCTATGCATAG
CCCAAGCACATATGGGGAATCTTCCATCTAAAATTATTAGATCCGCATCAAGGATTTTTG
CTCAGGAGAAGATGATGGTGGATACCCACTTAAATTAAGGATCCACTAGTATATGCAGGC
CGTAGATTTGAGGCCCCTCCTAAAATAGTTTCTGCTCGATTTATAGTGTCATAAAACACG
AATGTGTTCAATGCAATGTACACTAATTAACTAATGTGAACCTTATACAGTTAGAAACCT
ATTTGAGAAATCTGTTGGATATCTCAACTGCGCAAGGAGTAAGGACTGACTAGCCAATGG
AAGCTGTAATGTAGGATCCAGTAGTTATATGTGGGCTGTAGATTTCAAGTCCTCCTAAAA
TAGTTTCTGGTTGATTTATAATGCCATAAAACTCAAATCTGTTTATTGTAATATACAGGT
GTACACTAATAATTAACTAATGTGCAGAAGGCTATATGAAAAGCCAGTGAATGGAAAGCT
GTAACCAACTTTGTAACTGTGAAGTCCCTTCACCCTTTTTAGCATTTTACTGAAATCTTT
GACGTTCATATCTCTATTTTCAGGTTTATTGTGTTCTCTCACGAAATGCAACTCGAAGCA
CAATGTAACTAAGCAATGGAGTAGAAGTTCTCTGGCTGCCTATTTTACTCCAGCCTGCAC
CTACCTGAGAGACTCGGACTAGTTAGTAATGTATGAACGTGGAGGAAAGCCATCTGCATC
CTCTGGGCCTGTTCGGAACCTCTCAACTTGTCGATGTTGGAGCTGCTAGACAAGTCATTG
CTGAGCCTGCTGGCGGCCGTCCCTTCAAGAAAACCCTCATCTTCGCCAGATGTGGCGGCA
TCACGGGTAGATCTTCATTGTATGTATGGATCCTCGTCAAGCTGGTGCTAACACCATGTC
GTTTTTTCGCTTTGGATTGTAGCTCTTTTTGGAGAGAAGTTTGCAGCGTTCCGTAGCATG
AGATGTACATGAATATCTGCAAGTTCGATTCTAGTCTGAATTTGCAGATCCTGTGTACAT
GAATATCTGCAAGTTCGATTCTAGTCTGAATTTGCAGATCCTGTGTAAATGTTATACTTC
AAAACGAGCCAGTGTAGAAGAAGCATAATGCTGTGAATCCCGAGTGCTGAAGCATTTTTA
TGTGACACTGAGAGCATTTTATTTTTTTGCTGCAGTGGGTCCGAATCATGATTTCTTGTC
ACTTTCTTTCTAACATGTCTTTTTTTTGCTGCATTTTTATGTCGACACTGAAAGCATTTT
TATGTTTTTTGCTGCATTTTTTTATCTTGTTTTTGCCTGTGGCGCTTATGAGGTGTCAAT
ACTTCTCCTGAGTCCCGACTCTTGAAAATCTGACTGACCGACAAAGTTGAAACCCAGAGA
TAGGATTGTTCATCCTTGCAGCAAGAAGCAAACAGGTTTAGCTGGCTAGCCTTCTTTGCT
ACGCCTAATATCTTGCATTTTGCTTATGCGCAAACACCAATATCTACCCCAAACTATCAT
TTTCAGCTGGACTCTGCACTTCATTAAGAGCATCTCCAATAGACGCGCTTCGCCCGGCGC
CGAAAAAACTGAGGCGCCGAAAAAACTGATTTACAGCGCGTTCATCGACAGGTTCATTAA
GAGCATCTCCAATAGACGCGCTTCGCCCGGCGTCGAAAAAACTGATTTACATCGCGCTCA
TCGACAGGTTCATTAAGAGCATCTCCAATAGGCGCGCTTCGCCCGGCGCCGAAAAAACTG
ATTTACAACGCGCTCATCGACAGGTTTAACGCGGCGCGCAGCGTTTGCTCCAGCAGCCGC
ATTGAAATGCAGCGCGGGCGCGCAGC