| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1582663
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18922 |
6 |
4200 bp |
MLOC_18922.3 |
Available |
Available |
LOC_Os11g45250.2, FRAME:-3, EVALUE:3e-92, 13111.m04518 protein ribonucleases P/MRP protein subunit POP1 containing protein, expressed |
CDS Structure of MLOC_18922
Contig Sequence (4408 bp)
>contig_1582663 4408 assembly3_WGSMorex_rbca.fasta
GCGTTGCCTGCTGCACTCTCTGCCTGTTGCTGCAAATTGTGTTACATGTCAATACATATA
TTGTTGTGTTGTTTTTCTTCAAAATACAAACGAAATGCTGCTGAAATTTTGAATTTTTGT
TATTCCAATTTTCATTCCATGTCTCCCAACCAAACACTGGAACGGAACCATCCCGTTCCA
CTTTTTTGCTCGTACCAAACACAGGAACGGAACCGACCCGTTCCTCTGGAATGGAACCAT
TCCATTCCATGACAGTTGGTTCTCCAACCAAACACACCCTTGGTTCCTCCTTCGTTCCTC
CTTCTTTGACGTGATGTATGTGTTAGGTGAGCTGGTCGCGATCTCGTCCTTCTTGGGCTC
TTCCTTCTTTGGTTGAGTGTAGGTGTCAGGTGAGCTAGTAGCGATCTCCTTCTTCTTGGG
CTCCTCCTCCTTCTTTGGCTCCTCCTTTGGCTCAGTGTAGGTATCAGGTGAGCTGGCTGC
AATCTCCTCCTTCTTAGGCTCTTCCTTGTTTGACTCCTCCTTCTTTGGCTCGGTGTATGT
GTCAGGTTTGTTTACGGTAATCTCTTTATTCTTTGGCTCCTCCTTCTTCGCCTCCTCCTT
TGGCTTGTTGTAGGTGTCAGGTCTGACAGGCATGACCTCCACCTTCTTTGGCTCCTCCTT
TTTGGGCTCCTCTTTCTTCGGTTCCTCCTTTGGTGCGGTGTACGTGTCGGGCGTTGAAGC
TTCTGGCTTCTTCGACTCTTCCTTCTTTGTTGCGGTGTTAGTGTCGGGTGCCGCAGTTGT
TGGCGTCTTTGGCTCTTCCTTCGGTGCAACATAAGCATCGGTTGTGGCAGGCTCTGATGA
CTTGGGCTTGTCATTCTTCTTTGGCTCTTCCTTCTTCGGCATCTTTGGTTTCTTCTCGGC
CCCGGCCTTCTTGGGGGTATCTACTTTTCCTTTTGGTTTCTTCTCCACACCAGTGTATCC
GGAGGCGTCCTTCTTGCCTTTGGACTTCTTCTCGGTGCCATGGTCGCTTTTACCTTTGGG
TTTCTTCTCAGTGGTGGAAGGTTGGGAGGGCTCGCTCTTTTCTTTGGATGTCTTCTCGAA
GGCGACCTCATATTTCTTCTCCTCGACGGCCTTGGTGGCACCTTCGGGTTTCTTTTCCAT
GCCAGCATAGCCAGAGGAGCTTACTGAATTCTTTTCCGCAACAACATTGTCGGGGGCAAC
AACAGGTTTCTTTTTAGCACCGGCGTAGTCAGCAACGACTTCAGGTCCCTTCTCCGCGCT
GGCAGAGACAGCTTTGGGTTTCTTCTCAGGGGCGGTAGAGGCGTCGGTGGCGGCTTCAGG
TTTCTTCTCGGCGCTGGCCGCGGAGACGTAGGAGGTCGCTTCGGGTTTATTCTCAACGCT
AGCGGAGACGTCGGAGGTGGCTTCAGGTTTCTTCTCGACGCTGGCGGAGACAGCTTCGGG
TTTCTTCTCAGCACTAGTGGACACATAGGAGTCGGCCTCAGGTTTCTTCTCACGAGCGGC
TTCGGGTTTCTTCTGGACGCTAGCGGAGACGTCGGAGGCGGCCTCGGCTATCTTCTCCGC
GCTGGCGGAGATGGCTTTGGGTTTCTTCTCGACACTGGCGGAGACGTAGGAGTCGGCCTG
GGGTTTCTTCTCAACGCTGGCGGGGACGTCGGAGGTGTCTTCGGGTTTCTTCTCAACGCT
GGCGGAGACGTAAGAGTCACCATCGGATTTCTTCTCGGTGCTAGCGGAGACGTCGGAGGC
GGCTTCGGGTTTCTTCTCGGCGCTGGCAGAGACGGAGTCGGCCTTAGGTTTCTTCTCAGC
ACTGACGGAGACGTCAGAGGCGGCTTTGGGTTTATTCTCGACGCTGACAGCACTAGCAGA
GATGTAGGAGTCTGCCTCAGGTTTCTTCTCAGTGTTGGTGGAGACATCGGGGGGCGCGCT
TCAGATTTCTTCACTCCACCGCCATAATCAAGATCATCAGCAACAGCGAGGGGGCTGGTG
GAGGCGACCACGAGGGAGAGAAGAAGTAGAGCGAGCTGGACCCTCATGGTGTGGTGTGGC
GGTGCGATGAAATGTCTGCTGGAGGTCGGCAGGTATTTGAACGACAAGCGAGGGAGGAAA
CGAGAGGTGATGCTGGTCTTGTGCATTTTCCCTCGGACAGTAGCCGCTAATCTCATCCTG
TAAAATTACGAGCCTTGCCGTGAAGAAAGGAGCCAAAAGAGAAGGCGGAAACTTTACAAC
CTGTCTTTGCTAAATAATAAGGGCCCTTTTTTAACATCTTTTCTGGGAAAACAATGTGCG
GTTTTCCAAAAATAAGTAGCATGCATGCAATTTTCTTTTTCATTTCTTGAGACACACAGT
TTTCTCAATAAAGAGGGCAGGCTTGGCGCAGTGGTGAAGTACACCCCACTTGTGCCAACG
GTCCTGGTTCGAACCAACCTCTCTGCATTGCACTGTAGCAGACATAAGACTAAGTTCCTA
TAATCCCTCTCCAGACCCCACCTTGTATGGGAGCTTCTATGCACTAGATCTGTCCTTTAC
AGTTTTCTCAATAAAATGTGGGTCCAGACCCGAGCTGTGAACCATAACACACGTAGGGGG
CAAACAATGTGTTGCCACTTACCACTAGACGCAAATCAGATTACTGGTCTAACAACTCAG
ACATGTTGCAAAAATTACTTTCATGCATCTAGCAAAATTACCATGTTCTATAGCCGTGCT
TGCAGCAAGTTCTTCACAATGGAAGATTGGGATGTTGCAGACTACAGAAACTCTAGATCT
TCCTCCTGCTGCTCCAGAACAACTGTGGCAAGTGCCCGTCGATACGCTGCTGATCTAGCG
TTCCTGACAAGAACACAGATCTCCTGACCCAGCATACTCTCATCACTCCATTGCTCTTGT
CGCAAGACCGCCAGAAGCCTTGCATCGCAGAACGCAACTGCCGCGCCATCCTTCCCAGTG
CTGCCATAATTAAAGTAGATGCAGACTTAGTATTCATTGGACAGGATAGCGTAACACTGA
CATGTTACAGTTGACAAGGAGAGCAAGTGTTAACCTTCCATGTACGAAACCAGTCATGAC
AAAGCCTATCGGCCATCTCAACGCCTTCCATGTGGTGTCCTCTTTGGGACATTCAAGGTC
ACTGGTGCCAGGACCCACACGTGAAAAATAAGCACTGATATGGGACTGCGGGAGCTGGAC
TTCCCATTTTTCTAGACATTCTTCCTCATCCTCCTCTGATCTGTAACAATCACGAAAATG
GATGACACTTTTCTTAAACAGATTCGTTCACCGCTTCCTTCCTATAAATGAAAGCAGTGG
GGTACAGAACTAAATGTTTTCGACTAAAAGAAGAGTGGCAAATGGATTTCATCAAAACAA
AACCACACTCTACTAAATAAAAAGAACGGCAGCATGAATGTTACAAAGCATGACTTCAGT
ATATGTAAACCAGAATTTTCTTGCCTACAAGAAGAATTTAATGTAGCTCCGATGTCCAAG
CCTCCATCAGCAAATATAAAGCTTACAGATATGTACCTGGTTTTCCAAGCTGTAAGATCT
GATGAAAATGGGGCGCAAACTACAGCACCCTCTTCAAAGGAACCTTCCTTGAACGCTCGG
ATCAGGACCCTTACAAGGCATAATCCATTTACAGGAGATGCTATCTTAACAGTGCCACCA
GAAGCCGATTTGGGTTCGTCAATACCGATTTTCATCTCAGATGAAGAACTCAAAGACATC
ATATCAAGTTCTTTCACATAATGTCTCAACATTTGAAAGGTTCTTGGCACAAATAGTTGG
AATGATGCAACGACATTTGTCGGTGATGAGCAAGAATCTCCAGAGTTGGAGTTTAATGAG
AAACACCCAGGTAACACCGCATCAGAAGGCTTTAAGTCATCTGCTTCAAGACATCTCACC
ATGCCCTCTTTATTTAAACTAGCCATGATACAATGCCATGGAGGTAAAGGAACTCTTGGA
GGTCTCTTGGCAGCAGGACGGTACTCAGCTGCGTTATCAAAAACAGCAGCCTCTTCTGTC
ATAAATGATGAATATGCTTTGCTGTCTGGGTAATCATAAGGGAAGCATGGTATCTTTAAC
TGCAAAAAGGATAGCCAGTGTGTTAATATTGAAGATATTTCCAAATGAGCAATGGAAGCG
GAATGACCACTGCTCATTGTTCAGCATCCTCCTTAATGCAACATATTTGACTGTATTTTG
AATGACCCATATACTGAATAGTAACAGATGTCAATGCTTAACATAGAAGTATAAGCAGTG
GTGAAGCCACGCTATACCTGTGTGGTCAAATGACTACATAGGAATTTAGCAAGTTTAAAT
GACTACACGGAGATGGCTCCGCTCCCACCCCCGCTCCGCTCCCACCCCTCCCTAGCCTAG
GTTAGCCCACCCCTACCACGCCGCCGTC
