Contig Data
morexGenes
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Map Locations of contig_158214 (2206 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_158214

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18827 2 2039 bp MLOC_18827.1 Available Available LOC_Os05g48422.1, FRAME:+2, EVALUE:3e-125, 13105.m05151 protein 60S ribosomal protein-related, putative, expressed





CDS Structure of MLOC_18827






Contig Sequence (2206 bp)

>contig_158214 2206 assembly3_WGSMorex_rbca.fasta
CAGTCGCCGGCACCGCAGCCGCAGCTGAAGGACAAGGCGGCGCACGAGGTGCCGCGCGCG
ACGGTGGCCAGCGCCGTGGCGTCCCTCACCAAGTGGATGCGCGAGCGCGCGGCGGAGGCG
CCGCCGAACCTGCTCGCCGACGAGCGCGACGACCTCGTCGTGCTCCAGCTCTCGCTCCGC
CGCGTGCCGCCCAAGCCCACCACCAAGCCGCACCTGCTCCCGCTCCCGCACCCCGTCGTC
GCCCACTCGGCCGCCTCCGTCTGCGTCATCTCCGACGACCGCGCCGGCTCCGGCTCCCCC
GCCGCTACCGCCATCCTCGACGCGGCCAGGTCCCTCAAGCTCCCCGTCTCGGAGGTCGTC
CCCTTCTCCGCCCTGCGCACCGACTACCGCCCCTACGAGTCGCGCCGCCGCTTCGCCGCC
TCCTACGACCTCTTCCTCGCCGACCGCGCCCTGCTCCCCATGCTGCCCCGCCTCCTCGGC
AAGGCCTTCTACTCCACCAAGAAGGCCCCCATCGCCGTTGACTTCACCCGCGCCGGCTGG
CCGGAGCAGGTCCGCAAGGTTCTGGGCTCCACTTTCCTGTACCTGCGGACCGGGACCTGC
TCGGGGATCAAGGTGGGCAGGCTCGACATGGAGGAGGAGGAGATCGTTGAGAACGTGATG
GCGGCTGTGGAGGCCGCCGTGGAGAAGGTGCCCAAGAAGTGGGCGAACGTGAGGGCCCTG
CATTTGAAGGCTGTTGATTCCGTCGCACTACCAATATACCAGGTTGTGCCAGAGTTGGGC
ATGAAGATTGAGTTTCCGGTTGGGCGATTGGAAGCAGGAGAGGTCATCGATGCTGCAGAA
GTGGAGACTGGCAGCAAGGGCAAGGACAAGAAGATGAAGGCACTGAAAAATGTGGATGCC
AATGGTGGAGCCGCAGGTGTGAAGTACAAGAGGAAAAGGAAAAACAAGGATCAGACTGAA
GATGTTGTGATGGAGGAAGCACAAGAGGTGACTGAGAAGAGGAGGAAGAAGGAGGCTGCG
CCTTCCGTAGAGGTTTCTGCCGGTGAGGACCTGAAGACCCCAAAGAAGGGCAAGGATAAG
AAGCGTGCATTGGACATGGAGGTGGAGGATGCCAGTCCGGCAGAGAAGAAGGGTAGGAAG
AGTGAGGAAGCCAGCTACAAGAAAAGTAAGGGCAAGAAAGAAGGTAGCAAGCAAGTACCT
GAGGAGGTGGAGGTGGAGGATGCCAGTCCGGCAGAGAAGAAGGGTAGGAAGAGTGAGGAA
GCCAGCTACAAGAAAAGTAAGGGCAAGAAAGAAGGTAGCAAGCAAGTACCTGAGGAGGTG
GAGGATGTTGGCAGCAAGAAGAACAAGGGGAAGAAGGGAGAGGTCAAAGAGGGGAAGAAG
AAGAAGAGCATGAAGGGTGATTCTGATGATGGTGAAGTCCTCTTGGATGGGGAAAGCACT
CCTGCTGCTGTTAAAGTTGACAAGGAAGAGAAGAAGAGCAGGGGGAAGAAATCAAGTGGC
GATAAGATGAAGAGATCCAGGGCAAGGGTCTAAGGTTGTATTTGGTTTTCCTGAAATTGC
TGCTTGTCAGTTGAATGCCAATCTCTTGAATTGAGACCAAGCTGCATGTTCTATGCATAG
ATAAGCTGGTAAATCCGATTACTGTCAGCTGTGAGATGCAATCATTGTCGAACCTGCTTC
TTTTTTGTATTAGGAGATTGCACTTAAGATTATACTGCTGAGTGTAATACGGTGGTGCCG
CGGCAGAATATCTGGAGTAGTTTCTTCAGATTTTGGTAGCTTATAAACAACCTTTGGGGT
AAAGTTATGGTGGAACTGTTTCTCTTTTCATCTTTTGTAATCCATCTGCTAGTATGCAAC
AATTTTGTATTGGTCTGATACTATGCTTGTGTTGGTCTGTCTTCTCTAATGCACCCCTCT
AATAGTAGCTTCTTGATGATTCTGGGTAGCAGGTGTACTATGTGATTTGACAGTCATCTA
ATAGTAGTCTCATCTTTGACAGACATCTGGACTATTATATGATCCAACTTATAGTACTAA
AGGTTGATTTACCACCATTTTATTCTCTTCATGTGTTTATTCAGGGCTCCTTTGATACAA
AGGAATTCTATAGGATTTTTGGAGGATTGAAACCCTTAGGATTATTTCCTACATTGGTCC
TTTGAATCATAGGATTCGATCCCATAGGAATTTTTCCTATGGAATC