Contig Data
morexGenes
Links



Map Locations of contig_1582086 (4329 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1582086

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18813 5 2485 bp MLOC_18813.1 Available Available LOC_Os06g08790.1, FRAME:+3, EVALUE:0.0, 13106.m00925 protein ORC1 - Putative origin recognition complex subunit 1, expressed





CDS Structure of MLOC_18813






Contig Sequence (4329 bp)

>contig_1582086 4329 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCTCCCGCCCCTGCCCCCCTCCCCCCGCCGCCTCCCTCCCCCGCCGAGCCCCG
CCCCGCCCCGCCCCGCCGCCACTCACCATCGCCGGCGCGCCCTACCCCCCGCCCTCCCTC
GCCGCCGCTCCACTGCCCCACCGCCGGTTGTGCCGCGCCGATCCGCCGGCTCGCTGCCCA
CAGAGGGAAGCGCCCCGCGCCCCCCACTGCCGACGGCGCCCGTGCTCTCCGATTCCACCC
TGGGAGATCTGCCTGTTCCGTGTCTGTGCCAGCGCCAACGCCAGCGCCAGCGCCACCCCG
ATCAGATCCTCTCCGTCGAAGGCCATGGCCGCCGCCGCCCAGATGGAATTCTCCACCCCG
TCCAAGCCCACGCCCAGACGGAAGTCCAAATCCGTGGCCTCGCCGCCGCCAATGTCTCCG
GCGACGCCCTCCACGGTCCGCAGGTCCTCCCGCCTCCTCGAGACCCCCGCCAAGGACCTC
TCGGAGGCCGCCCTCTTCGAGACGCCGGCCAAGCCCAAGCCCAAGGCCGTCCTCTTCGAG
ACGCCGGCCAAGCCCAAGCCCGCGCCCACCCTCAAGCGGAAGCGGGCCGCGCCGTCGCCG
TCGCCCAAGACCCCGACCCAGACCGAGCGCAAGCCCAAGCGGCAGCGGCGGCTGCCGACG
AATCGGGTCTACTACCGCAAGGTGGTGTACGACGGCGGGGAGTTCGCCGCCGGGGATGAC
GTCTACATCAAGCGGCTGGAGGGCGAAGAGTCGGACGCCGAGGACCCCGAGGCGGAGGAC
TGCCGCGTCTGCTTCCGCGCCGGCGGCGGGGTCATGGTGGAGTGCGATGCCTGCCTCGGC
GGCTTCCACCTGCGCTGCGTGCGCCCGCCGCTGCGCCGCGTGCCAGAGGGGGACTGGGCG
TGCCCGTACTGCAAGGCCGAGCATGAGGGGAGGGCGATGGACAGGCCCAAGCCGCCGGTC
GGGAAGAAGATCAAGAGGACAGCCAAAGAGAAGCTTCTCGCCAGCGATTTATGGGCTGCG
CGCATTGAAAGGTTAGCGGCACTAGTTTTTTTTCTGTGGCGAAAAGTTCAGTGAATTGGT
TTCCTTACATTCGTGTGATAATTAGCTATAATTGGTCTCGTTTGGAAAAGTTTGCAAAAT
TGGAAGCTTGTTGGCAGTTTGCTGTAGTGATGGGCTGGTGGCTACTGATGTGCTTTCTGA
GAAATGGATGTGGAATAGTGTATCTGAATGGTATAATCGCTGAGAATAGGAACTGTAGAA
CATTGCTTCCAAGTGCTAGGCGATGGTGCATAAACTTAACTTTAGATGTGGAGTTTTCAT
TGGAGTTAGGTGCAAGACATTGTTTTGTTTTGTGTCTGATCCCTCCTTCCAACAAAACAA
GAGTTCAATCTACAATGTTGTTTTGGGATGGTAAAAGAAGGCAGGAATATGCTTTCAGAC
ATGCTTGTTGTTACAATGATACTTACTGAATAGCAATAACATGTAACAGTTTACGGAGGG
AGCCAGATGGAGCATTCTGGGCAAAGGTGAGGTGGTACACTATTCCTGAAGAGACTGCAG
CAGGAAGGCAGCCACACAATTTGCGGAGAGAGCTGTATCGTACCAATGATGTTGGAGACA
TTGAGGTGATTATCGTTTTTTCCTGTCTATGTTTGGTTCCTCAATTTTCCATGTTTATTG
ATTCTACTTGCTTTCTTCTTGTGGCTTTTACAGATGGAAACTATCCTTAGACATTGTTTT
GTCATGAGCCCCAAAGAGTTTAGGGATGCCGCTAATGACGGAGATGATGTATTTTATTGC
GAATATGAGTATGATATACATTGGCATAATTTTAAGCGTCTGGCAGATATTGATGATGAA
CCTGAGGTATATCTTCTGAAACGTCAAAGTTGTGAAACTCTGTTTATAGAAATCTGGATC
TTCATTGTGGTATAGTGAATAATCTTGTCCCTGCTCTATTATGTAGACAAAAGAAGATCC
CAGTGACGAGCCTTACAATGCTGCTGATGATTATAACAGTGATACCGATGTAGATTCAGA
ATACGATGAGGAGGATGAACCGGCTGCACGTTGCTCAGCCAGAAAGAACCAATCTAATGA
GAAAATTTTGCCTGCTGTACTAACTCTTCCTCCCTTTCCCTCTATAATTTTGCATCGCTT
TACTGAAATGCCTGTTTGTTTGTAGAATTCATGGAAAGGGAGGATATATGGCCTGCAAAA
GATTGGAATCCGTAAAATACCTGAGCATGTTCGGTGTCATCAAAAGACTGCTCTGGAGAA
GGCGAAAGCTACCTTGTTATTGGCCACTCTTCCCAAGTCATTGCCTTGCAGGGATAAGTA
TGGCTATTCATGTTTGTTGCATGTTTCATCAGCTTCTTATGCAAACTGTTACTGAGTAGA
AGTCTTATGCCAGAGAAATGGAGGAGATCTCGACATTTGTGAAGGATGCAATTTGCAATG
ACCATTGTCTAGGACGCTGCCTTTATATTCATGGTGTGCCTGGTACTGGCAAGGTAACCA
ACCTTATTTCATGGCTGTCATGATGGTTTGATTTCTTTTGCTGTGGCTGAACGCTAAACT
GCATTTTCTGCACCTGCTTTGTTTATTGGCAGACTATGAGTGTACTTGCAGTCATGAGGA
GGTTGAGATCTGAATTTGATTCTGGAGCTCTGAGGCCCTATTGTTTTATAGAAATCAATG
GTCTCAAATTAGCTTCTCCAGAGAATATCTACAAGGTATACAAACTTCTAAGTTGGTTAA
GAAATGTCAAATTCCTACTCGAGCATAGCATACGCATTCCCTTATCAGTCAACATAAACT
TATAACAGCTCCACTTCATTGAATATGCAGGTTATATATGAACAGTTGAGTGGGCATAGG
GTGGGATGGAAAAAAGCTCTTCATTATTTGACACAGCACTTTTCAGATGGCAAGAAAATT
GGAAAGCAAGCAAACCAGCCAATTGTTTTGCTCATCGACGAGCTTGATCTCCTTTTGACA
AGAAATCAGTCGGTAATATAACCTAGCTGAACTTAATTAAATAGCTGTACAAATTTATAG
TTTATTTTTGGGAAAATGCCCAATGTTGTCATCATTTGGCCTTCTGATTTTTGTATCATA
TGTGTTCATATTCATTGACATTTGGATTAATCTTTCTATCAGGTGCTGTATAACATTCTT
GATTGGCCGACCAAGCCAAATTCAAACCTAGTTATTATAGGTACCTATAACTCTGTCTTG
GTTTGTGATTTTGATCTCTAGCCTATTATTTATTCTTTGGTGTGTTGTTACTGAATGCAG
GTATAGCAAACACAATGGATCTTCCAGAAAAACTATTGCCGCGTATCTCAAGTAGGATGG
GTATTCAGCGGCTGTGTTTTGGCCCCTATAATTATCGGCAACTGCAGGAAATCATAACAA
GCCGTCTTAAGGGTATCAATGCCTTTGAAGATCAAGCTATTGAGTTTGCTTCTAGAAAGG
TTTGGAACTTTGGATCACAGTATCATGTGTGCACATTTACTATGATATGCTTGTATATTT
TTGTCCATGATTATTCTTCTGTCATCTTATCCGAGATTTGCTGAGAAATTATTTAAGCAC
TAGGTCCTTCACTTGAAGGTTAATTTCTCCTATTTGTGTTCAGACCTCCATGATGTTTCA
TAGTAAACATTTAAGCCAGAGTCCCATGAACTAGTAGAGTGAATCATGCTTTGATAATTT
CTACGCTCTTCCCTTTTTGAATAGTTTGATATGAGGCATCTCATAATCACTGCTGGGTGG
AATAAACATAGTTTCCACAATGCAGTGTGGTGCCATTGCGTGTTAGTTGCCATCAAATGT
TTTCGTTAACATGCATCTTCATTCATCTGATTAGATTGCTTTTTCCCGCAGGTAGCTGCT
ATGTCTGGCGATGCTAGGCGGGCCTTAGAAATTTGTAGACGCGCAGCAGAGTTTGCAGAC
TACCGTGTTAAACAATTTCAACAGGTTGAACAGACTCCCTCTTCTGCAAATATAGGTAAC
CCTCTGCATTTGTACTACAGTTCTAAATAACCTATTCATTAAAGGGTACTTGGTTTTTTT
GCTAAGCTCCTAATTATATATAGCCCACTGAACATTTGTCCAATACTTTAGGAAATGGTT
TTGTTTGCATGGGTGACATAGAAGACGCTATTCAAGAAGTCTTTCAGGCACCACATATTC
AAGTAAGTGGAGATAATGGTTGCTTCTTATCTGAACTCATACTTTGTGTTAGCTTTGTTA
TGTACTCCCTCCGTCCCAAANNNNNNNNNNNNNNNNNNNNNNAGCTCTAGTACAAAGTTG
TACTAAGTT