Contig Data
morexGenes
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Map Locations of contig_1581961 (3515 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1581961

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18778 1 1604 bp AK362118 Available Available None





CDS Structure of MLOC_18778






Contig Sequence (3515 bp)

>contig_1581961 3515 assembly3_WGSMorex_rbca.fasta
CATGAACAAAGAAATATGATACTAACCATTTTATTANNNNNTCTAGGGCATATTTCCAAC
ACAGTATACCTAACGGGGCATTAAATGCTCCTTGTCTATGTCGTCAGGGTTAGGTGTAGG
ACATTGTAGCCTACGTCAACAGTTTGATCATTGTTGTTGGCACTATTTACCATGTGTATT
TACCGTTTTGTCATTGTGGTAGCCCCTTTCACCTGTAAAAGGAGGCCCATGAAAACCGGT
ACAAAGGTCGACATCATGCCCACTTACACTAGGTGGATGCACTTCCCGCATATATTGTCA
CCAAGTTGTAATTTGGGCTTCTATAAATAATGCACCAAAAGCAGGAGTAGGGTTTTATGC
CTCACGGAGGTCCGAACCTGGGTAAATTTGTGTGATTTGTTGCTGGATCCGCTCTTTGTG
CACTGTAATCCCCACGGACGAACAATCAAAGGGCCCTTGTTGGCCCCGAAGATTGTCGTA
CGCCGACACATGGGCAGATTCAGGCCCTAGGCAGAAGGGACAGCGGCCTCACGCATGAGG
CCATCTCCTTCGTATATCGCTACACTCAACGAAGGATGCGTGGGCCTTGGCCGAGTTCGC
CAGGGGCTTGACCCATTCCTGGGTCCGCCACTGGCATGATCTACGTACCAATTACCTACA
ACTACACCCCCTTCCTCCTCGTGAGAGACGTTGATGAAGTTCGTGTCAGAGCCATTGATC
TTGTGGTCATTCATGGCCAAGAGCACCTCTGGCTCCGCCTCCTCTTACTCTTCACCTGTG
TAGATTTTGTCGAGCTCCGTGTCCGCTTGACCTACACCTTCGCGTCCGATTGGATGAAGT
TGAGGATGGCATGTTGCGGTCACCTCCTTCGCTTGGGCAACGCGAAAGCCTGCAGCAAGA
GGTGCCAGATCTGCCTCCTCTTCCTCCTCCTCCTCCTCCTCATCTTCTCCTCCTTCAGCT
GTGACGAATTCAAAGGTAGGCCGGTTGCTATCTGAGTTTTATGTCTGGCTCTGATCTCCT
CCAACATCTTCAACTGCCGCTTCAGAGCGAGCATGACGTAGGTGGTGCTTCTACATTGGG
CCATGGCTAGCGACGACCTTACTAAAGGTAGCGTCACAGAGAGGAGGAAGAGGGTAGAAA
TGCAGACGGCTAGGGTTGGGATGTCGTCGTTTGACTTAAATAGCCGGGACTCGGACAACG
TGCTAGAGTGACACCATGAATACGTTTTTCAAACCAAAGATGGTGTGGGCCCTTGAAGTT
AATCCTACATGACAGGCACGTCTAGCCGTCCTCATATTTTCCATATATATGAGTCCCAAA
CGTTTTTGATGTCCTCATATTTGCCTCATATGTATGGGTCCCAACCATTTTGGATGGATA
TGAAGGCTCCGCGGATACATACTCCATTTGTGGTTCAACCCCGCAAACCCTCACCCTCCC
ATGATTCTAAAAAATATACTCTCTCTGTTCCATAACTTGCAGAAATGTCTTATGAGTATT
GTGAGACGGAGAGAGTAGCACTCAATCTACAGCTTGCCAAATGACCGAATTTCTAGAGAG
TAGCACTCAATCTACAGCTTGCCAAATGACCGAATTTCTGCCAATACGGCAATCGCCCAG
CCGCAAACTAAACAAACAGAGCCTATACGCAGTTTCTAAAAGGAAATAAGATGCAAAATC
CATCATTTGAATTAACCCTTTTCCTTTCTATAGAACTGCCTTCCTTCTTGACATCATTTA
GCAAACCTCTTTGTACGTTGACTACATTCCACATGACACTATCCAAACATGACAGATGTC
CCCGGAAGGATCACTATCAAAACAAATACTGTAGAAATTTCAACAAACTGCAAATTTAAC
TCATGTAGCGCTACACATTAAGAAAAACTCATGTGGCACAACTACACCTTCACAGTTCAT
AAGATGTTGCTTTTGAGTTCTCACAGTTCATGGATTTTGCTTCTCGTTTCAAAAGTGTCT
ATTTTGTCGCTCAAGAAAAACATGTTTGAACCACACAAGATTTTCCACTATCTATGATTG
CTTTATGGTCAGTTCCGCTCTCAGATGTAGTACTCCATCAATGAAGAAGAGGCTGTCATC
AGCCATAAACGACGGCCAGGGAATTGCAAAGAGATTCCGGTAGCCAACTGCCTTTCCACC
AGTGAAGGTGTAGTAGCCCTTATACTTGCTGACAAAATCGCCCGACGGCCTTGTCCTTGC
AGCAAACTCATAGTCCACGGTAACACTTGTTGAGCCTTTCTCTTGCATCCCTAAGAAGAG
ACCAAAGCAGTGGAAAGCACTTTGCTGATCCATGTTGCAATGTGCTGAGAGGAAGAATCC
CTGTCCAGCAAGATGGAATGCTTGCGAGTAAATCCGCCCGGATGGGAAAAGTCGGCTACA
CTCCTCACGCTTCAGATCCAAGTATGCTATGCACTGAGGATATGGTTGATCAAATTCCAC
CACCTTAAGCGGACGATATTTGTAAGCTCGTTCGGTATATTTCCTACAGGTCAACACATC
TGCAGCAAGGGCGCGCTGTCGATGTGGTGCATCAGCTTTGTACAGGAGTGCATCAGTGAC
ACTTTTAGATGCTTGCTCATGATCCAGATCACTGCACGCAAGGACCTTCCGCAACTTCCT
GCAGGTCATATGAGAGAACCGAACGAGCGGCAGTAAGCGAGTACCCAAGATTTCACGTCT
TTCTTCCGTTCTTGGGCATTGAGCACGAGCCCACTTGATCACAAAGTCATAGACTGCATC
CTCCGATGCCACCTGAAGGTCATTACTACATAAAATGGCTTCAATCCCAGCAAGGGGAAT
GTTCATCACTTCATCCTGAAACCTGAAAAGAGGAAGCATTCCTTTAGTTCAACAATGTTA
TTTCAATAATTTAGTTGGCTGTTTAAATGAAGAGGCTACCCACTTGGTCAAATCCTTGTA
TTTATTGGCGAGGAATTCCTTGGCAGCATCAGTCAGTGGCTGAACTGCTGCAGCCATTGA
AATGCTGGAAGGTAGATCTAGATAGAGAAGTGCAGATTCTGTGGTCATAGGTAAGCTTCT
TAGCAATTGACTGCAGTGCCTCATGCAAGAAACAACTTCAAATTTGTCAGAAATCATCAA
GATATCAAGCAGAAGGGTTGGCTCATTTGTTGTCAGCTTCCCACTGTAAATAAAGCTTAA
AAGCTCCATAAGGGCACTTTCCTCTGTTCCAAGTAGAAATACAACCATCAGACATAAAAT
TACTGTTAACTAAAAGGCAAAAAAAAGGAAGATAATTTAGCGCTCCATCACAACATAAAC
TAAAAACAAATGAAGAATATTGCTAATAAATAAGTAAAAACGACGCTCGTCAAGCACAGT
TTGCTGCGATCGTGCCAGCGGCATCACCGATTGGTTGCGCGGATGTGGTCACAACAGGCA
GTAAAAACCTTATCTATACCTAATAATAAAGAGGTTACTGCTTCCGTCGGAAAACTCACC
GCGGCATTTTTATAAAAAAGCCCCTGTAATTTTTG