Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
![](/morexGenes/blast_net_images/contig_1581874_assembly3_WGSMorex_rbca.fasta-MorexXBarke_maploc.png) |
![](/morexGenes/blast_net_images/contig_1581874_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
No map location |
Predicted Genes from contig_1581874
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_18754 |
1 |
339 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_18754
Contig Sequence (3948 bp)
>contig_1581874 3948 assembly3_WGSMorex_rbca.fasta
ACATATTTTAGAGTATACATTCACTCATTTTGCTCTGTATGTAGTCTTCTAGTGAAATCT
CTAAAATGTCTTNNNTTTTGGAACGGAGGGAGTACTTGTTTTTGTTTTTATCCTTGATTA
GTATTAATTGTTGTTTTGTAGACTTAAAATTGTGGTGGTTCCTCTTTTATACAGAAGCTC
AAGTGTGAAGCCGTGAAGTGTGGAGCAAGTGTGAAGCCGGGAAGTGTGAAGCCTCGTGAA
GACCTACTCGGTGGAGAGTAACATATTGTAGCATATATGTGCTGTAAAGATTGTAATAGA
TTTATTTAGTGGTAAATTTAATGTATCTTATATGTTCTTTCAAGTGTGAAGCCTCGTGAA
GTCCTACTAAGTGGAGAGTAACATATTGTAGCATATATGTGTTGTAAAGATTGTAATAGA
TTTATTTAGTGGTATATTTAATGTATCTTATATGTTCTTTGTTTCATTTGAAATATTTAT
TATGTATGTGAGTTGAAAACTTGTGAAATTGAAACATGAACTATGGGGCCACTTTATGAA
AATAATGTGTCCAATTTGTACATTTTTGACATGTGGGACCAATTTGAGAGATGAACATGA
CAATTCTAACTAGTGGGCGAGCTTGAATATATAGTGGCTTAAAATGGAAAATCAATAGAC
TATTAAAGGCTATGGCCCAGAAAATAAAAAAGGCTGAATTGTTGGGCTTGGCCCATGTGA
TTAACCAGAATTAACATAAAAAATAATATTAAATGGGCTGAATTAGTGGGCTTGGCCCAA
CTAAAGCGTCGAACCACACCGGGCTGATTCTAATCAACGACCTTCTCATTTGGTCATCAT
TTTGCCACGTCAGATTGCGAGTGCCAAAACAATTGGTCGTAGAACAAACGACCTTTTATT
TTGGTTAATCAACGACCTTCTCATTTGGTCGTCATTTTGCCACGTCAGATTGCGAGTGCC
AAAACAATTGGTCGTAGAACAAACGACCTTTTATTTTGGTTGTTAAGTTTCATTAAAGAC
GGTCAGCTTTTGACCAACTGTTTTTGGTCACAAAAAGGTTGCAAATGAAAAACAATGACC
ATTCAGTGATCAATATTGATGGTCGCAAGTTACCATATTTCTTTTAGTGGTCGTAGCCCC
CATGTGTTGGTTGCATGCATGTAGCATCTTTGGAGTTTGTAGAAATATTTTGAAGTGAGG
TGTGTAGCCGCCAAGTGCCAGATCATTTTTCCTACGGCGACTCACGACTTCATATTTAAT
TCTTCTCTTTGACAAAAAAATTCATGTGATATAGCCCCCAAGAGCTGGTTGTTCTCTTTT
AGATGGTTGTGTCTTTCAATTGTAGAACAAACAAATGTGGTACATTAGCCCCCAATGGCC
ATGTGGATTGCTTGCAACTGCATGGTACTTTAAAATCTTGTAGCCCCCAAGTGTTGATGC
GCCGTTCTTCAACTTTAAAATTTGCATTTATTTTCTTTATGCTTTTGGAGGAATCTTTGC
GAGACTCTAAATCCATTGTAATCGATCTTTAGAGGCAACTTGTGGATGAAAAGAAGCTAG
AAACACATGCACATAAGACAATAACTCGTCTTGAGTCAGAAAAGAAACATGTGATAGATG
TCCTTGAGCAACACAAGGTCGATTTTGAGAAGGAAAGAGATGCCTTTCTACAACGTGTCG
TGGATGTTGAAAACTGGCTTGAATCTCTGGTATGACGCAAGAACTATTCTCTTAAATTCT
AGACTTGAAAGATTTTCTGGCTTATCTCCTTGTTCATTGTTTTGCAAGACGAAGCAATGT
AAACCAGGCCCAGCCGACTATCATGAAGTTGAAGGCCATCTTTACTTATATTGAGAAGTT
GTTCGCTGGTTCTCTTGCTGCCATCAGAGCGACCAAAGATTTGCATGACTCGCCTTGGAA
TATAAAGGATATGTTGAAGCAATTGTCAACAGTTCCACAATGGATCGAGGAATACAAAAG
GTCGGCGGCTCGGAGAGGAGCCAACTTGGCGCTTGCTCGTGCCAAGGTTTTTTTTCTTCC
GAAATTTGATGTTGAAGCAGCCGCTAATGGCTTTCCTGAGTTGAAGGCGGATAACTCAAA
ATTTACTAGGGAAGATTTTAACAAATGCATAAAGGAGACCTGCCCCCTTGCAATTGTTCT
TGCGAAGGAGATGAACATCAAGAATTATTATCCGACCTATGATATGGACAACTGTCGCAT
CAGTGCATCAGAAGACCAGCCGTGTGAAATTGTTCCCCCTCGTCATAAGCGTCCTGTTTT
CCCTGATGTTGATTCTTGTGCGATTTTTGCTGGACTTTGGAATTTCCCAATTTATGCTTC
ATTGCATGGGATGACAAGGACCAACAAGCTGATGATGACGAGCCGACTGTTGCAGACCCA
GGCACAGAGCACCAAGAGAAGCGAGTTGGGGGAGAAGCCGCGCAAGCCGTCGTGCAAGAG
TATTCTTTATGATCCTTTGTGAAAAACTTGATATTTTTGTGTGGCTCCTAAGAGCTTGTA
ATAGGGGTAGTAATTTTAACCCACCAGTCATGCCATTGTGCACAAAAACTTCGACTTTTG
AGTCTTCTGCATGATATTCAAGCCTTGGCTTTTCTTGACTTTATGATAAACCTCCCTTTT
TCTGTATGTACTGGACAAGCTGTCAAAATCAATATTCCTCTTAGGTCTTTGATCAGGAAA
AGAAGTGGTCTTTTTTTGACCCAGTAGAATAACCCGGTAATATGTGAATAACCCGACAAT
AATTTCGTCAAGAAAACAACTGATCATCTCTATGACATAGTGCGATAGCTTGGTAGTCAA
TATATGAGAAAAGATGAAATTGGTGCAAAAAGAATTTGAAATAATGTATGAGCCAATTTT
ATAAGCTTGACGATGTGACTGAAGTCGGGAGACTGATTTTTTTACTTCAATGAAACTAGC
ATGATAGCCACTGGTTTATCCTCGCTTTCTGTAAGCCGGCCCTCACATGACCCAATTGAT
GTTTTAACGTGATAAGTTCGGACATGACTTGTCGAGAGTACACGAGGTGAGAGTAACATG
TTGCGAATAGGAAGGTTTAATCAAGTTTCAAAGAAGGCAGCTCATGAGGGCATGGAGTAT
CCTCGCTTTCTGATTTACCGGCTCTCACGTGACACAAGCATGTTTTAACATGGATATATT
CACGGTCCCGAAGGATTGCCTTATCGAGAGTAAACGGGGTCACCTTGTTTGGAGAAGCAT
CTTGCAAATAGGCACGGTTAACCATAATGTTTTGATTGTATTTGGCTTATAGCCTGGTCA
AGAGGGAAATTATTACTGGCTAACACATTGAGTCGGGAGCCCCCAAATGACCCATGTTTC
AAAGAATAAGGACTTAGACAACTGTTCTAGTTGAAACGACACGGACCCCAAGTCTCAGGG
GATGTAGGCTTTATTATATTGAACACAAAGATTGATACATGGATATGTACAAAGTGTAAG
AAGACCGAATATGAGCAATTTTCCAGGGCATGTTCGTTTCTTCCTCTTAGGTACGTGACT
TCTTGTGCTCACGTATGTCAATCAGATAATATGACCCATTGTTGAGGTTCTTGTTGATGA
CAAAAGGCCCCTCCCATGGTGGTGATAGCTTGTTCTTGTCTGTTTGATTTTCAATCAAGT
GGAGCACTAAGTCGCCTTCTTGGAAAATTTGCATGCAATCTCTATGATAGTAGTAGCGAC
GTAGGTCTTGTAGATATATGGCTAATCGTAAAGCGGCGAGGTCACATTCTCTATCCAACG
CATCAAGGGTTTCTTGGCGAGATTTTTCATTGTCTGCTTCAACATAGGCTGCACCTTGAT
GACCCACAAGTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTGTCGAATCCAA
CGAGGAGCATAAGGCTCTGATAGAAGGATTTCAGCAAGGTAATAACTG