Contig Data
morexGenes
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Map Locations of contig_1581719 (3181 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1581719

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18718 1 1026 bp MLOC_18718.1 Available Available LOC_Os01g27360.1, FRAME:+3, EVALUE:2e-132, 13101.m02844 protein glutathione S-transferase, putative, expressed





CDS Structure of MLOC_18718






Contig Sequence (3181 bp)

>contig_1581719 3181 assembly3_WGSMorex_rbca.fasta
TGTTGCAGAATTTTTTTTCTTCGTCTTTCTGTAACATAGGTACTTTTGCGGGAGAATTTT
TTTGCAACGAAGGTCATGTTTCAGGAATTTTTATAACAAAGGTCAAGTTGCGGAAACTTT
TTTGCAACGTTCATGGGCGGCTGGGGCGGCCGGATGGTCAGAACATAAATCTATAGTAGA
CCACTGCAACATCATATATGTTTTAGAAACATAGTCTTTGTTGCAGAACCGCATAGTCAC
TTGGACGCGTGTCGTACGAGGAAGGTGGCTGATGCGACCATTATAATCCGCGGCCATTAT
AATCCGTCGGTTGATGGTTAGCTTTTCCTCATGTTTTAACAACTAAAATTTCCGCCCACG
TTAAGTAAAATTTTCATTAAAAACATTTGAGATGAGGTTCACATGTTTTAATAATTGCAA
CTCGTGTTAACTAAAGTTGCGATAAAAAAGTTCGATGTCATGCTTAAAATCCGAACGGGT
GCAAAGTATTTCAATACGGGAACTAGAAACCATGGTTACATCTTCGACTAGAAAGACATA
CAAACACCTTATCTAAGACTTGACGAACAACAAAACTGAAAGCGCTATAAGATATTGTCC
CATCTCAAGAGCTTTCCACGACCACACATTGGCAAGCACAAAAACTGCACGCTGGTGCAA
TCCCAGCCGCGCAAGCTTATTCATTGCCTTATTCGCGACACCAACAAGAAAACGCCATAC
AGATCAGATCTTATCCTCGGACGCGAAACCCCTCCTAAGCAGATCACGGCTTCTTGGGAA
CCATCTGAGCGGCGAGCTTCTTGATGGCCGGCCTGGCCATGAGGCTCTCCCACCATGCCT
TGACGTGCGGGTACGAGTCGAAGAGCGCGGCGTGCGGCGTGGCCATGAAGTAGAAGGTGT
AGGGGAAGTGGTTGAGGTCCGCGAAGCTGACGAAGTCCCCGGCGAGGTACTTGTGCTGGG
AGAGGCGCGCCTCGTAGACCTCCAGCACCTTCTTGAGCTTCTCCAGGCTCTCGTCCACCA
CCGTCTGGTTGGTCGGCAGGCCGCGCATGAGCGGGTTGATGAGGCACTCGTACACGATCG
GCGACAGCGCCGGGTTGTAGGTGTGCGCGTCCACCTCCGTCCATACGTCCACCATGGCTG
CTTCCTTCAGGTTGCCTTCTCTTAGAAGGTCGACCTCGTCCGTCTTGTACTTGCGCAGCA
CGTACTTCGCAATTGCGCGTGACTCTGAAGACGGAGCAAGAACACAATGTTTTTGAGGAT
TTGAGAGGATATTTGGATCGACACAGAGCAGCACCGGAAACAAAATGGAAGCATTCGCTT
TACTGGTTGGTCCCATTCTGTGCCGAGAAACAGACGTCGAGCAAGTAGGAGTATTTGATA
CGGACAAATTTAACTGTAAAGGGTAAATTATTCGTACCGAAGAGAAGCAGATCTCCATCC
TGGAAGGCAGGGATCTGGCCGAACGGCTGCAAGAAATGAAATCGGAACATCTCGCATCAG
ATCGAAAACAAGATGGTACGAGAAACCAGAGGATTTGAGTGAGTGGTCGGGGAGCTTAGT
TACGTTTCTGACGAGATGCTCGGGGCTCTTGTGCTCCATGGCCTTGAAATCGATGTCGAC
GACCTCGTACTCGGCGCCGACCTCCTCCAGGCACACCAGCACCCGGGCCACGTTCGTCGA
CATGGCCGGCCCGAACACCTTCACCGGCGCCATTTTTTCCCTTGGTTGCTACACGCGAGA
GAGCGAGAGATCGGGGTGTGCTGGTCAGTTATCTGTGTGTTGAGCGGTGTGCGGCATGAC
GCCAACTCCTTACCCATTTTTATAGGGCGTCTTACCGTTTGCGGGTAGGTGGTTGGTGGG
AGGTTTGGACGTGCGCGCTCGAGAAGGATGGAGAGGAGACCGTGCGGTGTGGGGTGACGG
GTGCAGTCAATTAGTGCATCACGGCTCACGTCACGACTCACGAGTGAGGTAGGTGCCATT
GCTTTCCGTGAACTTTCTGGAACATCGGGCGGAGCTGCCGGGCAGTCGCTTCTTCCAGAT
CAACCTCATTCATTTCATCCTCCTACGGGTTTACCCGCGATTAAGTTGTTCTTTGTCCGT
GCCTTCATATTGGTAGCCTGGTCTGTCAGACCCGGACTTAGCTCCATCAAACGCCCGCCG
ATGCGTCGGGCACTCCGTCTGTCCGATCATGCCTCATTTTCTTCTCACAACTTAACACCT
CAATTAACATACCATAAATTCATATAAACTTATACACTCCATCCGTTTCGAAATATAAGT
CTTTTAAACATTTTTACTAGAGGTCTACATACAAAACAAAATGATTGAACCTAACTTTAA
AGTATGCCTTTATAAATTTGTATGTAGTTCACTAGTAAAATCTTTGAAAAGACTTATATT
TAGATGCGGAGGGAGTAAGTATGTAAATGTTGTGTTACACATATTGTTCTGCTACTATAT
CAAGATATGTCATCGAAGTATTAAAAACGACATGTTTAACCTACAAGCTAGCTTGCTATG
TAGAACATCAGTCACGGGTGCCCTTGTCCTTTCTGGCGTACTTGTCATCCTTCTCACGGA
ACTACAGGTAAAAACTAGCTAGCTTGCTATGTAGAACATCAGTCACGGGTGCCCTTATCC
TTTCCGGCGTACTTGTCATCCTTCTTGCGGAACTACAGGTCAAAACTAGTTAGCTTGCTA
TGTAGAACATCGGGTGCCCTTGTCCTTTCCGGCGGACTTGTCATCCTTCTCGCGGAACTA
CAGGTCAAAACGCAGTAGGGATCGAGCCGAATTTGCTCATCGTCGGAGCTGTTCAACCCG
TCGATGCCCTTGTTCTCCTCCTTCGGGTCAGTCCGACCATGGCACGGACCGCCCGATTCT
GCTCTCGGGCGATGGCACAGGTATTCCTCCGTTGTCGTTGTTTTATAATGCGGGTGCAGA
TGGCATCCTCCTCCGCACCACACGCCTTCGCCTCCGCCATGTCGGCAGCAAGATGGGCCT
CGAGTGCCCTCATTATCTCCTTCCCACGGCAGGCACATGGGTCCCGGTGGCACTCAAATC
CCGACGGACCGGTGATGGAAAAACGGAGATTGGAAGGCTCCCGGAAGGACTGTGATGATT
CAGTTGTCGGTGTCAAAACCGACAGATCTCGGGTAGGGGGTCTCGAACTGTGGACCTTAG
A