morexGenes - Barley RNA-seq Database

Contig contig_1581575

Source Contig contig_1581575

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1581575 (2577 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_1581575

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_18692	1	151 bp	MLOC_18692.1	Available	Available	None

CDS Structure of MLOC_18692

Contig Sequence (2577 bp)

>contig_1581575 2577 assembly3_WGSMorex_rbca.fasta
CATCAAGGGGCATCACCTCACAATCCTATAGCCAAAGCATCTTTGAACTTTTCTAAAATA
TACTTGAATAAACTCATTANNNNNNNNNNNNNNNNNNNNNNNTTAATTACCAAAACCACA
TTAGGGAGCAATTGTGCTTTCAAACAAGATAGTCCACAATTGGGAGTCTACAATAGCATA
TATTCGAAAGATCATGCAACCGATGCAGATGCCAGGACAGGAGCTGAATGTGTTCAAGAA
TCACATGATACACCTGCCGTTGAAGAATCTCCTGAGCTGCATGAGAAGAGGCAACACACT
GGGATGCTATCCTCTGCATGGTGGGAAAGATGAAGATGTCTTTTGATGATGCTTTGAAGA
CAAGTGAGTCACTTTCTATGCTAGAGGTGACTCCTCCATGTGAAATCCTTGATGCACTAA
AGAAGGTACTAGACTTGGATGATAGTCATATGTTGAAAGCATATGGAATATTGATTGTCA
ATGAGCGTTTGTTTGAAGCACTCATGGCGCTACCCGAGGAGTTACGGAAGCCATGGCTCT
TGACCTTGGATTGATTGTTGCTATCTTGTTTGGTTGATGCATGAACTACTATGTATTTTG
TTGTTTGTGAACTATCTATTTGTGCTATGTGTGAGAGACATAAACTATTCATTTGTGCTA
TGTGTAAGAGACATAAACTACCATATTATTATGCATGATGTGTTCTCGATACTACAAAAC
TATTTTGTGTCATGTTTTCATTTTCCGTATTTATTTGTACTTGTGTTATTGTTTTGACCT
TATTCACAACATTTTAATGATATTATGTGTGCAAATTAATATTTAAATATTTAAATATAC
ACAAAATACTATTTTTCATACATCTACACAAGTATATATTGCCTAAACTCAAAACAACAT
CCAATTCGATGGTTCATACATCCAAACAACAATTGGTATTGGGTGCTACCCTGTGATTCG
AACGGTAAATTTCATGCACAATCATTCAAACAATCGAATCCAAATTGAAATCCATTTCCT
TTCCATCATGGATTTTGAATCCCAAGTTCAATTCAATTCCAAGCAGTTGTTTCAACATCC
AAACAGAGGGTTTCACAATTTCATGCTCGGCCAAAGACTTCACTACTTTGTTAGTAAGAA
ACGCAGAGACTGGGCTAGTCTGAGACTCTGAACCTGCCAAAAGGCACCAGTATTCTACCG
CTTCCTGTCAACAGCTGCTATACTTTTCCCTGAGTACTACACTAATTGGTCTTTAACCTC
ACTATGTGGAGTACTCCCTCCGTCCCAAAATAACCGTCTCAACTTTATACTAGCTCTAAT
ACAAAGTTGTACTAAGGTTAAGACACTTATTTTGAGACGAAGGGAGTATCATTTTCATAC
CTAAACTGAAAATCAGGGTCGTCGATGTATCTAGAAAATAGTTCACCGTAGCACAGTAGA
GTACTTGTATGGTATGCTCATACAGTAGAGTAGCACAGATAGCAGCTGGAGGAGCGAGGC
TGGGGCGACGGGGGATTGGTGGGAGGGGCTGGGCGGGGGGATCTGGTCTCCGGCCGCCGT
GGGGGCAGCGGAGGGGAGGGGGAGGAGGGTGGGAGCTCCATCAGAGTTCCTCGCCGCTAC
TGTCGTTTAGCCATGGAAGTAGGGAAGACCGATTGTAGGTATCTAGTGAGCAAGAACGCA
TTCACAGTAGATGTGATCGCTCGGACAGATGTTTCCTAGCCCAAGATTCCTTCCAAGAAC
TGCTCGAGTAACAAAAAACAAAAAACAAAAACGATTTCACCCGAAGTGAACGACTTACCC
AGTCGCCGATAGCACGGATCATTACAAGTTCCGGCTCAGTGTGAAGATCCTTCTTGTTCC
TCAAAGAAAAGATGTCCTGGCAAGCAAAGCCCATGCTCCACAGAAACTGCAGGACCAACG
TTGTATTCAGGTAGCTGAAATAAAGGGAAACCATGATAGAGTCGTTAGATGATGTCAAAG
TAGTCTCCATGATATCAACTTGCTGCTACTTGTTACTTGAGTCTTGAGTTATGCTCATGA
ATTTGGAAGAAAACACACAGGGAATTATTAGCAGGGGGAGGGAGTACAAGTAGGCGCTGT
AGTTGGAGATGTCGGACGAAACCCCTTCGGCTAGCGTCTCGCCGGAGCTCACCGGCGATC
GGGAAGAAGAGAAGCTCACACGAGAGAGAGAGAGAGAGAGAGAGAGATTTGTGCTACGCA
ACTTACTTGCAACTTTTCAGGCTTTTCATACTTATTCAGTGTTCTGTTACAACGACAGAG
AGAAACAAGAAAAGGCCACCAACGCCCGATGCTATCTTCACGGCGGCGATCCTTGCGACT
TGTGCCATCCCACGATTCGGATCATGCGCGCATGAAGTGGCCCTCGACGACTCCATCAGC
CCTCCTATTCCGTCGCGCCATCCCACGACTAGGCCAGCTAGAAATCAGCGAGGGTTTTTC
CTAAACCTACACTACTCCCTGAACCGAACACTTCGCAGAGTTTCAGTCCAGGGTTTTATG
CTGAAAACGAAAACCTCTACTCCATGGCGATGATGATGATCCCACCATGGCTACTGA