Map Locations of contig_1581501 (3959 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1581501

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18677 3 1380 bp AK358243 Available Available None





CDS Structure of MLOC_18677






Contig Sequence (3959 bp)

>contig_1581501 3959 assembly3_WGSMorex_rbca.fasta
TGTGTTGTCATTAACACCAAAAGTCGATTAGGGGCATAGCATGCACTTTCAGTAATCGAC
TTGCTATTAAGTCCGGTAATTTGGGTGCCATTGGCACCATGAAAAATGGAGGTCAATCCA
CGGGAGCGGCGGCGACAATGTTTGACAATTGTTATTACTCTCTCCGTCACGGTTTAGAAA
AGCGTGTTTGGAATTTTTTTTAGAACCTAGGTGGTTATTAATTGGGTGTGAGATGGGTTA
AAAGTAACGTCCAAACTACGCATGCATATAAAAAGTGCAATGAAGTATTAATTAGCTGTT
AGGAGTAAATGCAATGCATCCTAAACCTTGTCTATTATGAAAATGCACGTGAATTTAACC
GTGCCTTCTAAACCGTGACGGAGGAAATATATTGCTTGCGATTTTCCTATCTCTGGTTTG
AAACTGTAATAGAGAAGCTAATAAAGCTGCTCATGAGCTTGCTAGATTGGCTACATTTTT
CTTCATATATTGGTTAGTTTGAGGAGGTTTTGATTGAAATTGTACCCATCCTCATAAATG
ATGTAACTGTCTTCTAGTGAATGAAGTTTGTGTTGAAATAAAAAAAAACTCATCATATAA
CTACTCCAATAGAGTATATGTAGTTTGCCCAATGAGAGAAGGTAGAAAACTTCTCTCATT
CTATCTTGGAGCTTGTGCAAATGGTGTTGATTCATAAACATACAATCTCCCTCTCCCTCC
CTCCCTCCCTCTCTCTCTCTCTATTACAATTAATTCCATTTTTACCCTCACGATTCACCA
TTCTGACAGTTTATCCAATTTTAAGAAAATCCTCAATTTGTACCCTGTTTTGCACCATCC
CCTCTTCTATCCCTCTCGCATAAATTACAATGTCAAAGTGTAGCAAGAAACAAATCGACG
CCACGAGGAAAACAGCACTGAAACTGAATGGTGACATCTTCAGACATAAGACATGTGGAT
AACCGGACTAGTCACTGAAACTTTGTTCAGGCACACAGTATCATCAAAGCCAAGCCATAC
AATGAGTTGAATACAGCGCAAGGTAGGCATTATGCTTCTGGGACCAGATTAACAGACATG
TTATTTCAGGCACAGATTATCATCAAAGCTAAGCCATACAATGAGTTAAACACAGTGCAA
GGTACACATTATTTTGGGACGAAGATTATCAGACATGTTATTTCACTCAATCAGACAAAC
GGTGTGTGTAAGTGTTAACTCCATGCCATGGTGAAAACTGGCACTTGGTGGGGACACTAG
GAACTTCATTAATTTTCAGGAGATCTCAGGACAGAGATCACGAATTAGGTATACGCATTG
GGGTTTGCTTGACTTCTGACAAGTGGGACACCATCGTCTCGCCACACAATTCGATCCTCG
CACAAGGCAGCAACTGCCTCAACGTAAACTTGGTTCTCCTGTAACGTTGGGTTAATAAAT
CAGCAAGATGAACATCTAAAAGTCAATTGTACCGCTAAGAAATCTCAAATGCACATAAGA
TGCTACCTCATGAAGAACCCTTGCAGCCAATTGCTCTGGAGTATCATTGGCTAACACAGG
AACAACTCTTTGGGCTAAGGTTTTCCCTGTGTCGAACTGCTCATCCACAAAGTGCACAGT
TGGTCCTGAGTATCTGCATGGTTGGAAAACGTCATCAAATAAAACAGTGTGTCTTTTTCC
AAAAGAGAAACAGGTAATACCATATGGAAAACAAGAAATCAGTAGTTCTGCAATCAATGC
CATCATCACACAAATTGAATTTATGCGTTATCACAAGACAATGAACAATAATGAATATTC
TTTCAAATGGATGCCAAGTACTTCCGGGAGGAAAATGCAAGATGTTGGAAGGTGCTAGAC
AAAATGTAAAGTACCTGGCTCCAGATGCAATGACTGCTTTATGCACTTTTAAACCATAAT
AACCCTTGCCTCCAAATGCAGGGAGCAGTGAAGGGTGTATATTCAGCATGGATCTGGGAA
ATGCCTGAACTAGCTCACCAGGTATGAGCTTCAAGTAACCAGCAAGTAGAATGAAGTCTA
CCTTCAGATCCCTGTTTCACAGTGGACATAGCCATGAGCTAAGACATCATGTGTGTGTGT
GTCATGAAATACAATCTTCACACTTGAAAGGGCAAACTGAAGCACACCGGGTACACTTGG
AGGCACAAAATATATAAAAAATTGTGTACAGTGGATTTCGGTCGAAGCCGTCACACTGAA
GCAAAAATTTGTGAACACAAGTTCATGCAACTAGAGTCTAGAACAAAGTAACATATCACA
TCTGTAAGTTTCAATCTAATTTATCAACTTATGTTAACTGGCAACTTCAGAACGTGATGG
ATACCCGAGGTACAGAAAGCCCGCCCTCAGTCAGAAGTGTATGCGTTTCACAAAAGACTA
GAAGTTCTTTCGAGGCAATCTGACTAGGAGTGGAAGCATGAAGAGGCATAACGATGATCC
TTTTCTAGCACAATGAAAAGTATAAACTAGGAAAATAGGAAATTGCATCACAGCCCTGAG
ATGAGACCAACAGCACCAACCTCAGAGCATTCAGAAGTTCATCTGTGGAGACCCCCTCTG
GTGCGGATTTCGACTTGGGAAACACGACCACGGGAATGCCATTGCACCTTGCATACTCGG
CGCCACCGCAGCCTGCAAACACTCGGATTCCTTCACCTCAGAACCACAATCCACCTCAAG
TCCAAGAAAGAGCTGCAGGAAGCAAGCAATCACGGTCACCTGGCTTATCGGTGACGAGCG
CAACCACATCCCCGTTCACCTTCCCACCCAGGGCGGCCCCGTGGATCGACCGGAAGTTGG
AGCCCCCGCCGGACACGAACACCGCGAGCCTCTTCCTCCTCACCCCGGAGTCCCCAGCTC
CGCTAGCCATCACCGCCGACGCGGATGCCGATGCCGCCGTGTATACGCGAGCGTTGGGGC
GAAGCAGAAACCGCCCGCAAGCGACGGCGCAGCACTGCTGCCTCTTGGCCGCTAAGCCGA
CGCGCGCGCCTCTCCTATGCTGGCTCGGGGCGGGATTAAGCGAGCAGCGCAACCCGGAGC
CGGAGGAAGCGACGGCGGCCGCCTCCATCGGGGGAGATTCCGCTGCCTCGGCAGAAACAC
GGCAAGAGAAGTGGGTATCTGGACGACGAAACGAGACTAGTGAGAAGGCTATAGGATATG
CTTACGTATGAGGAAGGTGGGCGTGAAGAACCCTAGCACCGGCGGCCGCCGTCGAGGGGC
TCCTGCTGCGCGCGGCGCGGCCGCTGGTCGGGTGGATTCTCACGGGTAAAGAGGATGCTT
TTGGGCCGGGTACACTGAGCCCAGCAAATTTTTACTGCCCGGGCAGAGGATTCCAGCCCA
GGGTGCAAGATGGATACTACTAAAAAAAACAATTCCCCCTAAAAAAAATTAAAAAAAACA
ACAACAAAAAACGAGACCAACCCAGGCTAGACTAGCCTGTTGGCATTTTTTCATAGAAGA
AAACTCCGAGAGCACCGAGTGTTAGAGCCGAGGCTCAAACACCGACGGGATGGCTGCAAA
CTCCAACACCAAGCCAATTGAGCTATGCTCGGTTCTCATTGCTTCGAAAAAAACATTGTG
GTTCGCCAAATATGACGTCTTCATGCAATCACATACTCCCTGGAAGAGGTTTGGGTTCGG
GTATTTCCACCTGCCTGCTGCTTTTTCCCTCTCGTTAGGGTTTTTCTTCCTCTCGCCAAG
TTCCGACGTTGAGAACTCTACCTTCCCAAAACCCTGATCGGAGCCCCGACTCTCTACCTC
TCCTAGCAGGGCTTGGGTGTTTTTGCGCAGGGTTTCTGGGTTTTCCTTCTCTGCGGTTGC
CTCGTGGTGATTGCGAGGGGGCAACTCGATCTCGATCGGATCTAAGCTAGGGCTGATGGC
GAACCATGGTGGAGCATCTGTTGGGTAACGTAGCATTAATTCAAAAAAATTCCTACGCA