| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1581454
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18665 |
2 |
1597 bp |
MLOC_18665.1 |
Available |
Available |
LOC_Os08g39140.4, FRAME:-1, EVALUE:4e-82, 13108.m04169 protein heat shock protein, putative, expressed |
| MLOC_18664 |
3 |
2006 bp |
MLOC_18664.3 |
Available |
Available |
LOC_Os08g39140.3, FRAME:-3, EVALUE:0.0, 13108.m04168 protein heat shock protein, putative, expressed |
CDS Structure of MLOC_18665
CDS Structure of MLOC_18664
Contig Sequence (4722 bp)
>contig_1581454 4722 assembly3_WGSMorex_rbca.fasta
CGCCGCCTCCATCCGTGCGAGACGGCGCCCCTGCGCCGGCGACCACAGCTGATCCCCTCC
TTCCCCTACAACCTAAGGCAGAAGGCCGGTAGAACCCTAGTTTCTACCATTGATGTTCAT
CAAAACTGACCTTGGTGAACCCATATTTACCCGTTGCTTTCTTTTCTGGAAAGAAAAGAA
GTTCAACATCAGGGCACATAACTGCACAGCTCAGGGTCATTTCTTAAATTGCAACGATGG
CTCAAAAGTTGGCTCAGTTGGAGCTGGGGATTCTTAAAATAAAGCTCAGGCACCACCACT
TTGTGAAAAAAAATAGAAGTTTTCAGGTCCAGACTTGGCTTTAGATGCAAGGAGCTCTTC
AGAAGTGGGCAATCTGAAAATCGCCGCGATCATTCAGCTTTGGATTTATTGCAAAAGTCC
TAAAGCCATTTCATATTGGAATTTATATCCGAATAAACAGGACATGTATCTCTTCTTTGC
AGATCTTGCTTCTCAACAACATTTCCAACTTCCAGTTGATGTTATTTTAGCCATTTGTGT
CTGCAGCCTTTCTGGCGTCAAGCCAGGCTGCCAGGGCAACTTGCAAATTTTGCGCTTTCA
GCAGGATTGAAAAGAACCAGACGAATAAACTCCCACGTGTCCCTACATTGTGAGGAGCAA
TGGGGATACTTAGCTTCTCCCGAGTAATGAATAAAGACATACAACTAAAACCCCCTTTTT
CAGATCTTCAGCGTCGACACCGGCCCCAAAGGACATGTAGAGCCAGTGCTGTACAACAGA
TGCTCCAGGATGCAGATGTAGCATTCTAACCAGCAAACTAACTTATGAACAGCAACGAGA
GGATCTCTCAGATTAGTTTAAAGACTTCGTCCTTACCAAACTCCAGAAACAACTGAACAG
AGAAACCAGCCAGATTAAACAGAAATAGCTTAATCAATTAAGCTGGTAGATACTACGATG
ATATATATAAGCAACGATTACGATACGCAGTTCCGGGCACTCCATAGACCAGCATCCCCT
AGCCCCATCAGTCCAGGCTAGGCACAGTAAACCACAAAGACAAACCGACCACGCGACAGT
AACCAAAAGATGAGCTAGCTCTACGACTTGGATAGCAGCAAATGCACACGCCTAGTCGAC
CTCCTCCATCTTGCTCTCGCCGGCGTCCTCCTCCAGCGGCGGCATGTCCGTGTCAGCCTC
AGCAGGCTCGTCATCCTCGTCGATGCTCAGGCCCAGCTTGAGCATGCGGTGGATCCTGGT
GCCGAAGGTGTTGGGGTCGTCGAGGCTGAAGCCAGAGGTGAGCAGCGAGGTCTCGAACAG
CAGCATCACCAGGTCCTTGACCGACTTGTCGTTCTTGTCCGCGTCGGCGCGCTTGCGCAG
CTCCTCCATGATGGCGTTCTCAGGGTTGATCTCCATCGTCTTCTTGCTCGACATGTAGCC
GCCCATGCTCGTGTCCCTCAGGGCCTGGGCCTTCATGATCCTCTCCATGTTGGCAGTCCA
GCCGTACTCGCCCGTGACGAGGCAGCATGGAGAGTCAACGACGCGGTCAGAGACAATAAC
CTTCTCGACCCTGTCACCCAGCACATCCTTGATCACCTTGCAGAGCCCCTCAAACTTCTC
CTTGAGCTCCTCCTTCCTTTTCTTCTCTTCCTCGCTGTCGTCAAGCTTGAGGCCCTCCTT
GGTGGCAGAGACCAGCTTCTTTCCCTCAAACTCCTTGAGCTGGCCAATGGAGTACTCATC
AATGGCGTCAACCATGTACAGCACCTCGTAGCCCTTCTTCTTCAGCTTCTCAAGGAAGGG
AGAGTTCTCCACAGCCTTCTTGCTCTCACCGGTGATGTAGTAGATGTCGTTCTGGCCCTC
CTTCATCCTCGTCACATAGTCCTTGAGGCTGGTAAGCTCATCACCACTCTTGGTGGAGTG
GTACCTCAGGAGCTCCGCAAGCTTGGTCCTGTTGGTGGAGTCTTCGTGGACGCCGAGCTT
GAGGTTCTTGGAGAAAGCCTCATAGAACTTGGTGTAGTCCTCCTTGTTCTCGGCAATCTC
GAAGAAGAGCTCGATGCACTTCTTCACAAGGTTCTTGCGGATCACCTTGAGGATCTTGTT
CTGCTGGAGTGTCTCACGGGAGATGTTCAGGGGAAGATCCTCAGAGTCAACAATGCCCTT
GACAAAGCTCAGCCACTCTGGGATCAGCTCCTCACAGTTATCCATGATGAAGACACGGCG
CACGTAGAGCTTGATATTGTTGAGCTTCTTCCTCGTGTCAAAGAGGTCAAAGGGGGCCCT
CTTGGGAACAAAGAGGACGGCCTTGAACTCAAGCTGACCCTCCACAGAGAAGTGCTTGAC
GGCAAGGTGCTCCTCCCAGTCGTTTGTCAGGCTCTTGTAGAAGGCAGCATACTCATCCTT
GGTGATCTCCTCAGGCTTCCTCATCCAGATAGGCTTCTGCTTGTTGATCAGGTTCCACTC
GTGAGAAACCTCCTTGATCTTCTTCTTTTTCTTCTCCTTTTCTTCCTTCTCTTCATCAAT
TTCCTCAACCTTGCCCTCCTCAGTATCCTTCTTCTCATCCTCATCTTCATCGTCAGAAAT
TTCCTTTTCAGTGGTCTTCTCCGTCCAGAGGGAGATGGGATAGCTGATGAACTCGGAGTG
CTTCTTCACCAGATCCTTAAGGCGACGCTCCTCAAGGTACTCCAACTGCAGAGAACAATA
GTAAAAACTGTCATGGACAAGTCACATGCCACAAATTATCAATGGAAGGCAGAACTGCAA
CAGCCAAAAACATAGCACTCCAATTTTCAATGACCAGAAGTAACTACACAAAATAGCAAC
AGCAATCCAGGTCAGTCCACATGGACCAAGTCACTTGGCCAAAATGCAGTACTAACAAAC
TCATTACTAGAAACTAATTAGCAACAACAATCTAGGATGGCACAAACTATACTGATCCAA
TTTCATGCAATGGTAACATTAATGACTCCAACTTCAAGGGATCCATGCCAACAATTATAC
TAACTGAATCTATAACAACAATGGTAAACGGCAACAGCCATACATGATCACAACAAGAAC
TTAGCAACCTTCAGCATGCAACCCTTGCAGAAGCACATTAATCAACAAGACCAGCATATA
ACTGAATTTCTCTACAGAACCCTCCCCAAACTGAGTATAATCAACAACTGAGTATCATTA
ATCAACAGGACGAGGCAAATTCTTGCATTTACAACCTCAAGAGCATAGATGCAAAAGCAA
GACATGAACAGCAATTCAATCTAACAGTGCACTTGCAGAATCATGGAAATTCTGAACAAA
ATTAAGACATGAACAGCATTCAATCTAACAGAAATCTTAACAGAAACAAGACATGAGCAG
CAATTCAATCTAACAGTACACTTGCAGAATCATGGAAATTCTGAACAAAAGTAAGACATG
AACAGCATTCAATCTAACAGAATTCTAAACAGACGCAAGACATCAACAGCATTTCAATCA
AACAGTACACTTGCAGAATCATAGAAATTCTGAACAGAAGACATGGACAGCTTTTCTAAC
AGCACCCTTGCAGAAACATGGAAATTCTGAACAGAAGTAATGAACAGCATTTCAATCTAA
TTGTGGAACCATGGAAATTCTGAACCAAAGTAAGACTCGCAAGAACTACCAAGTGCACCC
AGAACATATTAATCTGTGAACAGAACAGGTAGCAAGTAAATTGTGTTGAGACTCTTATAA
CTTGATGTACCTGATCGTCCTTGAGGTAGAGGGTGATCTTAGTACCCCTTCCAAGGGGCT
CTCCAGTAGTATCACGTGTCACAGTGAAGGAGCCACCAGCCTGGGACTCCCACACATACT
GCTCGTCATCGTTGTGCTTGCTGGTCACAACGACTCTCTCAGCAACAAGGTAAGCAGAGT
AGAAACCAACACCAAACTGACCAATCATGGACACATCGGCACCAGCAGCCAATGCCTCCA
TGAAATCCTTGGTGCCAGACCTTGCAATGGTACCAAGGTTGTTCACGAGGTCTGACTTGG
TCATACCAATGCCACTGTCGATAAGGGTGAGTGTGTTGGTGGCCTTGTCAGGGATAATGT
GGATGAACAGCTCTGGCTGAGCATCCAGCTTGCTCTTGTCAGTGAGGCTCTCAAACCTGA
TCTTATCCAACGCCTGCACATCAGAGCACCCAAATACGCAATTTAGTATCACAGATTAAC
CAGTAAATAATGGACATAAATCAAAGTTTTGAGACAGCTAATGCATTACAGGAGTATCAG
CCTTTACTTTTATTTATCATAGATGTAGATTACATATATGCAATAACCTAGCAACCATCC
AAAATCTAGTTTGAATCATAAGTGTAAGTACTCTCTCCGTTCCTAAATATNNNTCTTTTT
AGACATTTCACTAGAGGGCTACATACGGAGCAAAAAGAATGAATCTATACTCTAAATTAT
ATCTATATACATCCGTATGTAGTCCTTTTAGTGAAACATCTTAAAAGACTTAGGAACGGA
GGGAGTACATGCTTTTCAAGGGTTAACCCAGTAACACAAAACCATATTTAGCAAAAAAAA
AAGTCAAAAAATCATGCTACCAGCCATGTACTCCCTTCATCACAGTTTATAAGGCATGTA
CGTATATCTAGGTTGTCAATTTGACCAACTTAATGAAAGGCATATATTGCAAAAAATATA
TCATTAAAAACTTTAGATATTCTATTTTGTAATGATATAATT
