| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1581374
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18650 |
1 |
1013 bp |
MLOC_18650.1 |
Available |
Available |
LOC_Os02g43600.1, FRAME:+2, EVALUE:3e-72, 13102.m04844 protein 50S ribosomal protein L19, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_18650
Contig Sequence (5085 bp)
>contig_1581374 5085 assembly3_WGSMorex_rbca.fasta
CATTCAATACAGTTATAGCATGGACAATAAACTATTATNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTCTAGGGCATAATTCCAACAGTTCAGTCCTAAGCAACA
ATCATTGCTCAAAGGGTCACCTCAAGTGTCAATTCATATAGGAGTATGATAGTCCCACAA
GTCCCTAGGTTTTCTTCTTTCCGAAAAGCAAGATAGAACTCGGTCTCTACATCAAATAAT
GCACATAACCGTATAATATTGTGTATCCGGTTCATTTGAACATGCCTCACAAAAGTATGA
AAAGTGTCTAATTAGTGAACCTTCTTGATACCAAGGTCATACACGCCTAATTAGTGAATT
TTATTTTGTAGCAACCATTCTTGATACCAAGGTCATGCATGTCTAATTAGTGAATTTTGT
TCTGTAGCTCATTTTTTTCTCCATGATATACAACAACCAAAATAACAAAGGGTGCACTTA
AAAATAAGTAGTAGGTGTAACCGACTAGATTGAGTGGGATAATTGGATTAAGAGTTGAGA
CCATAGTTTCTTCCTAAAGTATATGCAGTGTAACCCATAACAACACATTGGTGTTCTACT
AGTACTATAAATTTGCAATCTCAAGTGTTCCATATCTCTACAGAAGTTAATGGAATAACT
CATAATCTAGCCCAATAGGTTCTTCGCTCAAATGTGGAACCTCAAGTTTGTTGTTTTCCT
TCATCTCATAGGCATATCCCTTGCCCTGTGATGTCTCTTCTTTCTATTTTTTAGGTACAG
GAGTTTGTAGTTCATGTTGTGCATTGCTACTGAGCTAACATGGAGGTTTGCATGGACAAA
ACTATGAATCGAATTTACATGCATGATCGCATAATGCAACACAAGTTTTCAAGACCTGCT
AAGTGAAGCGATGACTCTTATCCTTCATGCTAAGATCGCAACAACTTCAGACAATACCAA
CCTTTTTTATGGTCTACCTCTTGCAAAAGTGCGTGAATTCAATAGTTGGATGCAAATGAC
TGCTTCTTCTTGGTCCCGTGTTATAGTCTTCTTTCTTTCATTTTTGTAGTTAGCTCAAGG
ATATGTTGAATGTTGCAGCTCTTCACGTTCTAAGTTGCTCTATGAAATCTCTCTTTGGTT
GTCTTTTTTGAGTCATAGGCATATACTTTATTCTTTCCTTTCTTCAATCTCTCGGATGCA
ATTTCAGGTCTTTGTAATACTTGTTATACTACGCATTTGAGTTGAATGAACTTGGCGCCT
TCTGGTGCCTTTTCTTGTTCAAAACATAAATATATACGCCTCAGAAACAAAATTACGCCA
ATTGCCATCATCTTGACAATGGACGGTTCGGATCGTTTACAACCTCTGGATAGAACGTGG
GCCTACATGCAGCGGCACTGACCCTTCCAACAAAAAGGATAACGTTCATCCCCAATCCTC
CCCCCGCCCCCGTCCGGCACCTCTCTCTCGCTTCTTCCTCCGGCCCATGCGACGGCAGTG
ACATCTTTGCCCGCCTGACCTTTCGATGGCCGCCGCCGCCACCGCCGCCGCCGCGACCGG
CACACTTCTTCCCCACGCACTATTGAATCACCGCTCGCCTCCGCCGCCGCAGCTGCTCGC
GCTGTCCTCCTCCTTCCGCCGCCTCTCCTTATCCGCCTCCCATCGCCGGACCACCCATTT
AGTCGCCCACGCAGACGCCGGCACCGCAGAGCCGGAGCCCGTGGCCGAGCCTGCTCCTGA
GGGCGAGTCTGTCGTTGCCTCTGCTGACTCCGAGGAGGGGGAGGCGGAGGGGGCCGTCGC
ATTGGCGGAGGACGAGGAGGAGCCGGCGCCGAGGCCCAAGCCTATTAAGTTCGGCGAGAT
CATCGGGGTAAGCATCTCTTCCGCATACATTGCCTCTTCCATTTGTAGAAATGCAAGCCG
CCGGTCAAGTTCGACGAAATTGTTGGCGGTGGAGAAATGCAGGTAGCGAAGCAGCAGGTC
AACGAGGGGTGTCATTTCTTTGCTTAATATGCAAAATTGTAATCTCGATATGAATAGTTT
TGAGTTGTCTGTTGAGTTGCTAGCAGCATAGTCTCTCGAGCACCATCGCATTAAGTTGTA
CTAACGTACTCCCTCGGTCCCAAAATAAGTGTCGCAAATGTAGTACAGTACTAAGTTAGT
AGAAGTTTTGTAGTAGACCAAGGGCACTGATTTGTGAATTTGGCAACGAAAAGGATAACT
GTTTTTTCTCGTCGAGGGTTCAGATAGAGGAAGATGTGGCTTGCTAAAATAAGTTTCATG
ACTGCATTAGTATGCGTGAATGGAGTTTGGTGGTTCCTTGGATTTCTGTATACTTTTACT
TGTTATATGCAAGACCATTTTGGTCCTTTGGAGCGCTTGACGTGTGACATACTATTCCTT
GAATTGTTTGGTACCATAGATTCTGAACAAGCAGTTCATCGAGGAGGCTGAGAAGGTGAA
AGTACTTCCGGATTTGAAGCCCGGTGACATCATCGAGCTTAGAATGGTGAGATTGTTCAC
TACTCTTGAATGTGTTTTTTTTTAATTCTAATTTGGGGGTTATTGATGTCCTAAGCAAAT
GTTGTTGCAGCAACGTCCCAACAAGAGGAGATTGTCTCTCTTTAAGGGTATAATCATTGC
AAAGCACAAATCTGGTGTTCACACCACGATCCGCGTCAGGAGGATTATTGCCGGTGTTGG
AGTTGAAATTACATTCCCCATGTAAGTTGGGTTTACTTAATTTACTGAGTTTTTAATTTA
ATATGAATACCATTACATGTATCAAATGGTGACAGTGAGTTTGTATTGAATCTATAATTG
CAAAACATTTCTGTGTATCTTTTGTTCGCTTTAGCTACAAGAAATTTGGACTATGCACAT
GTCTTTATACCGGCGTACTAATCTTAGTTATATCAACACGTGTGTATGAAATTTTTGGGG
TCGTTGGCTTTCACATACTTGATCGCGTACTTTAGGTTTTCTAGTGTCCACCTTAAAATT
TGTTGAATTGCTATTTATATCAAATTTACAATGAAGTGAGCGCCCAAGATACTCCTTTCA
TGATTAATAACTCATGATCTGTTTGGTCTAAGATACTAGTGCGTAGGTTAATTTGGAATT
TCCCTTTGAATGTTTCAAAGCTGTGAAGCATTACCGCTCAAAATGCATTACTTGTGTCCG
TACGGAAGAGGCACATTTACAAAACCAGTTAATTGACGCAACTTGGAATTTCTCTCTGAG
AGATTGGACAGCTATCAAGCAGGAGTTGAATCGTTCAATTAATCGCCCGATATAGTCCTT
TCGTACTTAAACAGCTCATTGCTAAATTCTGTTTGGCATTGACATTGTTGCACTATCATG
GGTGTGAAACTTTGGATTAAGCAAGTAGCTTTCCAGTTACTCTTCTTCTACTCACTACTC
AGATAGGGTTATCCAACTTACAAATGCTCTCATTTCTGCAAATAAAATAGAAGACCCTAT
TTGCTATGATTCACTTTGCACATTGCTGCTGTTGAATGTTTTTATTTGCATGCATCTTCA
GTAGTAACGAGAAAACGGCTGGCCCATCGTCTCATGTGTAATAATTGAAATCATATGAGC
AGTGGCCCTTTATTTGTGTTAAATGTCACGTTTTGCTTTTTGTGCACCTGAAAATAGAAA
TGCTTGTAGATACTTACTCGGCCTATACATTCCACTGCAGATACTCACCAAGGATCAAGG
AGATCAAAGTAATCAGACACAAGAAGGTGAGGAGGGCAAAGTTGTACTACCTGAAGTACA
AGCTTCCCCGTTTCTCAACCTTCAAGTGAGATTAGACACGCTCCTCACACTAGCATATGT
CGATTTCTCCTTGGCAAACGAGTTTCCACCATCTTGTTCAGATCTGTGCATCCACTGTAA
TGATCTCTGAACCTCGAGTCGCATAATTTTACATCTTTTTCCGATTTGCGTATATCACGT
CTTGCGTTGTGGAGTGTGTTTCATTCTGAGTGTGTAAAATTCCTAGCAGCGCTCCGGTAT
GAACATGGTGATGTTTATGATTGTGCCCTTTCCTTGCTCCCAGCTACCTACCAGAGTCCC
AACTCCCAACTGTTGGTTAACAGTACGTAACGCTGCTGTTAAGAAAGAAGAACAGTTGTT
ATGAATAGTAGGTCTGGGCTCTTATTGTTACGAACAGAGTAATGAATAAGGGTTGAAGTT
TTCTGCAGTACCACTGGTTGGTTTGATGGCGGGTCATATCGTATCAATTTTCTCTCCGGC
TAGGAAACTTGTGTCCAGGGGTTACACGACATTGGGTGTACATGTGCCCGTGGCATTGCT
GCCCCTGGAAACTCATATTGCTTGCTCGGTCCAGAAACACAATGAAGGTTTCACTCAGTT
GGCAAATCTGTATGGCATGGAGGTTTCATGCCATACTAGGTGTGGTTATTATTATTATTA
TTTTTTGCTGAAGATGCGAGTTATCTATAATTTTCTTACTGGAGCATCCACATCCAAGTT
TGAGCCTAAGTTTATCTAGCTCTTAAGCTAGGAAGAAAGATCAGCTCTTGTGTTTCATTA
AAGCAAGCAAATAACTGGGTCCTACGTCGTTGATTTTCTCGTGTCTTATTCGTAATGGCG
AAAATGATTGAAAACCTCGTCAGCTACCGCTAGCAATTTGTGTTTTGTAGGGCACCTACT
GACCGTGAGTACAATAAGAGCAACGAATACTGCAATTATTTGTTGAGAATAGTAGTAGTA
CCGAACGGAAGGGCAAATTATTATATAATCAGACAAGAATATCCTCCCTTCGGATCCCCT
TTTTGTACTTCTTATATTAATTAATGCGCAATGTAGGAGTGTATTTAATCACTGTGGCCT
TTTTACGTTTTCTCGGTGGGCAAAGGCAAGCATGGCAGCATGATCTCACTGTTGCTCTTA
CTATTACGCTCGAACTTTTCTGGTGATTTCTGCTACATTAAACATGTAAGAAAAATGTAC
TATACAGATTGTTTGAGAGAGCAAGCAATTCATCTCCAGTGCATTTTTGGTGGGGGGGGG
GGGGGGGGTCCGGAAAGGAAAACTGATAAAAAAAAAAAACACGGC
