Contig Data
morexGenes
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Map Locations of contig_1581108 (4462 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1581108

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18583 3 2464 bp AK365722 Not available Available None
MLOC_18584 1 443 bp MLOC_18584.1 Available Available None





CDS Structure of MLOC_18583






CDS Structure of MLOC_18584






Contig Sequence (4462 bp)

>contig_1581108 4462 assembly3_WGSMorex_rbca.fasta
TGCAAGAAAAGTAAACATAGACTAATANNGACTCCTAGACTAATACTAATAGACTAATAA
GGACTCCTAGACTAATATTAATAGACTATTAAGGACTCCTAGACTAATACTAATACTTCC
TAACACCGACTTCTTTCTCTTGGGTGGCTTTTGCCAATCTACGGTCGCTGACCCATGGCT
TTTGCCAATCTACGGTCGCTGACCCGTGGCTTTTGGCGGAGTCTCATCCTTGATCCCGTT
CATCCTCCTTGGAAAGGTCGGTAGGAGGCGCGTAGCCCCCCGGCAAGGTCCTAGGTATCT
TGATGTCTAGTCCGTCCGTACTACTGGGTGATGGCATTGGCGAAACTGATTGCTGTGCTC
CCATCGAAAAGGTGATGGTCGAAAAAACAGCGGTGGTAGGGTTGATGTATTCTCCCGATG
GAGCCGATGATATCGATGATGATAGAAGATGCGATTGTGCCAACGAAGATGCTGGAGTTG
AAGTTTGATGATAGGGTAAACATTGCAGATCCAATCTAGTAGTGCGAAGTTCCCCATGTC
TGGCGTCAGTTGTCGACGGTGTTTCGCGATGTACCTAACATCAATATGGTGAATGTACGT
GGAGTAGTATGACATCACCTCAGGTTACTAGATGGACATGGGGCGCAAGTTTTACACAGG
TTCATGCCTTCGCGTGGCGAGTAACAACCCTATGCCTGCTTACATGAGATTATCAAAGAT
AGATTACAATGGAGATGCACAATGGCGTATCTGGCGAGTTGAGGGTCAAGTCGCTAGAGA
TGGAGATGGATGATCTCGATGGGACGTCATAACCGGATCTAATAATATGCTAAGCTACGC
TTTTAGGGTTTTCAAAGAGGTTGAAGGTCCTATGTTCTTTCACGGGGATGCCCTTATATA
GGGGTCTTGGTTGGTAGGTGCCGTCCTCCATCTTTCTTCTAGGCATGCAAGTCCTAGACT
TCTCCATCTTTGGTAATGGCATGACTTCTCTTAAGGAAACCTGGAGTGGAATGTCTATGG
GAACCAGTCGCGCAGGCATGGGCCCTTCGTATCGCATGTATATGTGCAAATACGGCCCAA
AACGTAATACGCGTAGAATATGGTGAAACCACTTCCCCTTGACAGTTAGAACACACACAT
GTTTCTTTCTACAAAATTCAGAAATTTTTGAACTGTCCCCCGCCGCGCGGACTATCCTGT
TTCCTGGGGCTTTCTTTTTTATGTTTACATTGAGCCATAGCTTCAAACTTCGTGCTATTT
TGCAATTGTAAACCATTTGAAGCCACACTACCAATAATCCACTTCATAACCTGGTTCTGA
ATTTCTAACCAGCAAGCAGCACACTTAGTAGCATGTCTATTTGTTGTTGCATTTTGCTCT
TTTTTAGGTCAATTCATCCTTACAATTGCCAGAACGAAGTAGGTGAATGATTGGTTGTGA
GATATATTGCAGGCCATGTCATATAATGTTTAATATCTCACTCAATCCCGTTGGTGATAT
ATGATTTATCATATATTACATGTTTTCACCATGTGGCAGGATGAGCGTAATGCACCAGAT
GGGTGGTGTTGATGCATTGTCTGCAACAAGTCATGACAGTAAATCCAGACCAAAATCAGA
AGCTGGTAATGCAAATGTAGAGAAATTGCTGTCTCAAATGCATGATCTATCTTTTATGTT
GAAAGACGAACTTTCAATCCCTTCTAAGTCAGCAGATCGCTCCGAGTCCTGAAAGTTGCT
GAGATTCATAGCAACAATGTGCTATTTGCTATACCAGGATGGACAGCATTCTGGAGCTCC
AGCCTTTCGATTGCAGAACCAACCACATCAATTATCTTACCTGGTAAATTTACGTGGCGA
ACAATCCTTTTTTTTTCAATGGATGTCTCTTTTATATCAGTAAACTGATCGGTGGAGAAT
TCTAGCAATTTTCTGTTACATTGATCGAAAGAGGATTCTTGCAATTTTCCCTGATGATTT
GTCCCATTAGTTAGGAGAGAACTCAGATCCTGAGCCCACATTGTAATAAGTTTTTTTTTA
CTTACTGCTGAGTTGAGGCCTGAGTCGTTGGTTTTGTTGTGTATGTATCATTTCCGAGCC
TTTATATGTTGTATACGTAAACCGAAAACAAGATGCCCAGCCTATTCTGTGTTTTTCTTT
TCTTGATTGAAACCATTCTGCTCTTTTTCGAGGTTGACGGCAAGAAACTCGTGCTGGTTG
TTAAAGGAAAAAAGATTACTCGTGCTGATGGTAGCCCTGGAACATTGTATCTTACAACAT
CATTCTGCTTGCTGCTGATATATTGTACCTTGCATTTATCGATTAGTAATTGTCATCCTA
AGCAAATCGTGATACCTGACGAAGGAATTGCCAGACTTGCTGCAACTGTCCTGCTGTATG
CACTCGCCTGGTTTTTTAGTTTCTTAGCATTTCATGATTTGTAGACCCGAAGATCGTCCA
AGGGAGGGACCTATGCCGCTCAGATATGATTGCTTGACCAATGGAGAAGCATTTTCTTTC
CTTTCTTTGCGAAAGCAACAGAGAAGCTGCCCTGCAAAGCTTTGAGGCCTTTGAGTGCAT
ATTTTCTGATCGAGAAGGTGAAACTATCTAGATTTATCTCCATTGTGGCCTAAGCGAATC
TGTCTTGTCATGACAATTTTCTCAAAGTTATCTTTAGCAGTTAATTATTAATGCTAATCA
ATAATACATAATAACCCACTAGTTCAATGAAAGAGGTGTTTGATGTCATGCCGATATTGG
ATGATACAAATGTCTTAAGGAACCATGCATCAGTATGCTATAGGGAACACGGGATCTCTT
CCTTTTCTGTTTTCATCCTGCCAAGTGAAAAGCCTGGAAATGGCAGCGGATGCATGTTTC
TGAATTTTGATTGATCCACTGCAACACCATCTCTACGTATATCTAGTTGGGATACTACTG
AACTGAGACTCGAAGATCGGATATATGAAATTTATCCCAAAGTCAGGATTAGTGTAGATA
AAATTGGAAAGGTATGTGCACTTGTTTTACTGTTGTAGTCCGTGTTATTAGCCTATTAGG
CGACTCGTCTACTGCATTTTCAGTTGTGAAGAGTAAGTCTGAATAGTAGCCAAGTATGAA
GCGAAAATGCCTTTTGGAGCTCGGCCTCCATGAAGGCCGGTTTTAAAAAAAATCTAAAAT
TCATATTTTTACCATTCGAAAAAATCTAAACAAATTCAGATAAACAGGGAGGCATAACAC
ACATGTTTATAATTTTTTAGGATGAAATACATTAAAATGAGGGCTGTGCAAGAAGACAAA
TCTAATGCTTTTTAACACATGATATCATTCACCCTCAAAGTTTAGAAATTTGTCTTTGTT
GTACAGGCCCCATTTAAAGCTATTAATTTTTACACATACACACATTTCATCCTTGTATAG
TTGCATTTTTTTTCAGAATTTTTTAAAGCTGAAAAGTTTGAGTTTTGAATTTTTCAAAAA
TAAAGGCTCCATGGAGATTGGTCACCAAAACGCCCTACTTAGTATGAAGCCTATTTTCTT
CCAGCGAGCACAACATAGCCATCTTTAGTTGTGTTTGTAATTATGAAGCTACATTTTTTT
TGTAATTATGAAGCTTGTATAACCCTGAACAGCAAATATACATGAATCTCTTGAGCTATG
CGGTAAACAATGCCAAGGTTCTCAGTTTTGAGGTTAACTTTATGGAACAGCCTGACACAT
CTTCTTGTGAGCATTACAAAACAACACTTTAATATTAGGCATCTTTTCACCAGCAGGATG
GCGCACTAAGTCCCTACTATGTTGAATTTTGTAGCCACGCCACAGTTTGAACATTACACG
CATACATGAATTTAATTATCTTTTGTGTATATTTCTTTGTTTTCCATATTTTTTAGCTTA
AGTACATGCTCATGACTGCACTCAGTTATTATAATTGGACATTCTTGGAGCAAGTAATGA
GTGACTTTTTTTTTTTGATAAAAAGGGGTTTCCCCACTTCATTTTATTGCAAAAAACGGA
GCAAAGAGCTGTCCAAAGTTTCTAGCCTACAACATCCAAATTCCAAGCGAGGGGAGGACA
AGATACTTAATTATTATAGTGCACAAACGGGCCAACACCCTGACAGACATAGGAAGAAAA
CGAAGAAGAGGAGTCCCTAGAGCAATTCGAGGCTTTTTGCAGCAGATTGGATTGGAAGCT
TTGATGGCCCATCAACCAAAATGCGCCCTAAGGATCAGCCTCCCCGATCCAGCAACACCT
CCAACTTGGTTTTCATCTCCACGTGATTCGCAATAGTTCTCCTCTTCGATGGTCCAGGAG
CCGAAGACAGCAACGCAACAGGACATATGTAATGACCAAGATGCGGTCCTTTCCGATCTG
GGGGTCTAGGCCCTCGAATAGGAAAGAAGCGGATCTAAGCGTTTCGCAAGCAAGTAACAT
AGCACAAATAATAATACAAGTA