Contig Data
morexGenes
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Map Locations of contig_1580819 (3806 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1580819

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18504 1 673 bp None Available Available None
MLOC_18506 1 652 bp MLOC_18506.1 Available Available None
MLOC_18505 1 224 bp MLOC_18505.1 Available Available None





CDS Structure of MLOC_18504






CDS Structure of MLOC_18506






CDS Structure of MLOC_18505






Contig Sequence (3806 bp)

>contig_1580819 3806 assembly3_WGSMorex_rbca.fasta
TTTCGATGCTCGTTGGTCTTCTTTTAGTTCAAAAAAATCATCAAAAAATTTCAGGTCAAT
TGGAGTTCGTTTGGTAAGGAAAACCTGAAAAGTGAAAAATGTGCACAAAACAACAACTAA
CGCTGGACAGTGGGTCAATAGGTTAGTGCTAAAAAATAATTTCAATTAATAAATAATTCT
CCAAAAGTATTACAGAATGATAATATAACAACATGACACAATAAAAAATTATAGATACAT
TGAAGATGTATAACGTATACCCGACTCATTAGGATGTCACTCCCGAGAGACGATCTAATG
TTACCGTGTGGTTCATAGCTTCTAAGCAAATCCGGTCATTTGGAAATCTTCAATCCTGAA
TCCGTGCGGCTTCATTTCGGAACCAAGTGAGAAAGCCCCGAGATACTTTCTGAACGCCTC
CGAAATGCCGGAGACACCCCGAAGTGTCTTTCACTCGACCAATTAAACCTCAACCGATTC
AAGGGCTACTAATGGGGTCACCTACCAGGGGTAGGGGCATGGACGAGCCTTCTAGGGCCC
ATCTGGGGTCCGCACGACCATTAAAGTCCCAGGACTGGCGATGCAACTCAGGTTTCGCTC
GGACCCATGGAGTCACTCGGACATCTTCGAGTGAGTCGGACATGCCCCGACACTTCGATA
GAGGCAAGCGTGGACGGTGTGCTAGCTTCAACGAGCCAAGGAACTTAATCCCGTACATGA
AGTGCAGTCAAGACCAACGTTACCAGTAACGACCCTACTTAGTGTTGTAATTTCTAGTAA
CGCCGACAATTGCTTTTATTTATTGCCCTTGTAATGGTGCTCGACGGGTCGTGGCGAACT
CTATCTAACCCACCCTCGAGCTCCGTGGCAAGGGTTCAACACTTTGTTGTAATCACACAC
CCTTCCTATGAAAACACAAGCCTTCGGGCACGATACGTAGGGTCTTTACCTCCTTCGAGA
GGGGCTTGAACTCGTAAAATCCGAGTGTTACACCTGTGTCGTAGTTAGGCTCCGTCCCTC
ATTCGTACCGCTAATAATATTGTGAGTATCATTCCCTCGACACTATTGTTAGTATCAAGC
AAGTACAAGAAGTTCGCTCGGTTGAAGAAACTATTGCACAAACTCAAGGAGAACGTGTTT
TGGCTCATAGGTGTAGACACATCTATTAATGCTAAAAAATTCAAACAATAACTTCACTTT
TACATCTGAATATTCTATGTTTGCATATAAAATTTCGCAAAGAAAGAATAGATTTTGTGG
CTTGTATAATAAAACATAAAAAATGTCTCATAAATAGTTATAATCAAGCATAAAATATGT
CTTCTTCACACAAGACACAAAAAAATCCCTATTTCACCGAAACTTTGTGCACAGATATAT
AATGTCCGGACGTACACACGAGATTTTTTCTTAAAAAAAAACTTTTTAAAATGTGTATTT
AGACAATGAGTGCATCTCCACCTATGAGCAAAAAAGAATTTCCCAAACTCAAGTAAACCT
AAACAAAAAGTACATCAAACAAATGGCTAGTTGCCACCCACCTCATCGATGAGTTGTTAT
GACATTTATTTTTTGTTGGCCTCCCCATCAAGTGTTCATGCATATATATAGTTCCCATCA
ACCGTGGTTTATAGTGATTACATGAAAAGAAGCAGATAAAGAAAGACATCCATTTGGTGT
GCCAACATAAGTTATCTTGAAGTTATCTGGTCATGGTGGATAATATTTAAGACAATTCTT
CTCATCTTATTTTGTTAAAATTACGTTTTAGACAAATTCAGAACATATATTGTGCCACGC
GAGCACACTCATACAAATGTGTTAGTTAGATTTGGGAGGCATTAGGAAATGATTAGCTTA
TAGCACCTGTTGATATGGCGGTGCATCTACGTTGCATCATCCCCTGATAATGTTTGGCTG
TACATCGCTCCCGGCATCCACAAGGGAATGTAGAATCAAGAGCAACAAGAGTTCCCTTAG
CTACATGAGCTGTAGTGCGAGAAAGCAAAAAAGGACTCTGTACCGAAGAACTGCTGTTCC
TCGTCGTAGCAGGCCTCATGTGAAGGAACCACTTTTCACCCAGTGAAACTCGAAGAAAAC
ATGAGTTTCGACAAAACCGTGTTTAAGACTAGACAATTTGGAACCAATTCAACTGAACGA
GAAGGCTGCATAAAAGGTGAAGCGATGCTGATCCAAATTTCTCCTTTGCAGATATGTATT
GGAACAGCCAAACCAATGTCTCGCTGGATGCATGGGCTTTGAAATGGACGGTAAGAAACT
AGTCCGACCAACGGCTAGTATCGGACGGTGGGAACTATACTTCTGCAAAAGAGTAATATC
CATCCTTGGTATTCGAATCGTGCGTCCGAAGCTCATTTTGATGATCGTACATAAAAAGTT
GGTCAACACGGTTATTATATACAAGTTCAGGTGATTATACGGTCACTGACCGTCGTACAA
CTCTGTATTTTTTTCTTTTCACCGTTCAACATACGTGAGCAGGGGCGCAGGTGGATAGTT
CCCCACCACCAGCACAGGGAAATCCCTACCGCGAGATGCCGCTCCGCCACCTCCTATGCC
GATCCGCCGCTGTCTCCGACGACCTCCGCCGCTCCTTGAACATCGTCGCCTCGTACCCCC
CGTGGGGTGCGATGGGCCACATGACGTGGACTATCGGCGCGCCGAGCGCGTAGGTGCGCC
TCGCCGAGCCACCGCCACCGCGCATCTCCAAAGTGTACGTCCCAGAGCACCTCGTCAAGA
CAGGCGCCCTCCCCGACCCCAGCGACGACTTCGTGCAAGGGCTTGGCGGCGCCATCTGTG
CCGCAAGCGCCGACGACCTCCCCCTCTTCGTATACGCGAAGACGAGCTTGTTTGCTCGCA
TGGTAGCCAGGCAGGGCGGCCGTCCGCTGCGGCTGCCATCCTAAATCGACGCCCTCAAGT
ACATCGACCCGGACCACGTCCCTATTGTCGTGCGGTTCGTCTTCAACCCCCTCACGCGGC
AGTGTAGGTGAGCGGCGACGATGCAGGTGGGCGGCGGTGGTGCAGGTAGGCGACGACGGG
TAGGCAGGGGCGCAGGCGAGTGGCGGCGGTGCAGGTAGGCGGCGACGATGCAGGTGGGCA
GGGGCGCAGGCGAGCGACGACGGTGCAGGTGGGCAGGGGCACAGGCGAGCGGCGACAGTG
CAGGTGGGTGGCGGGGAAAAGTAGGAAGAAGGAGGGGTAATTAGAATTAGGTTTGAAAAT
TGAAGTTTTTTATATACCGACGGGTGGGGTCCACTTGTGTTGAACGGTCAACAGAAAAAA
TACGAAGCTATACGATGGTCAGTGACTATATAATCACCTAAATTTGCATTCCATCGGTCT
CAAAATTTTTATCTTACATTTGTTTAGATATGAATGTATCTATTTAAGTTTTAATATTTA
AATACATCTATATCTAGACAAAGTTAAGATAATTTTGAAACGAAGTGAATATATAATAAT
CGTATTGACCAACTTTTCATATACCATGACCAAGACACGGTATCTACCCGAAATTCCCAA
CCGGCGCCAAACCCAAACAGAAGTTTTCGGCTCACCCTCCACGTCACCGATCCGCGTCCT
CGCCCTCCCAGCCAATCACGCGTCGGCTCCCCTTCTCTTTATAACAGGCCACAGCCCCCG
CTGCGCCCTCCACCTTGTCACATCGATCCCGGCCATCTCTCTGTTCCGGCGACAACCGCA
CCATCCCGCTCACCCTCCACCGCGAATCAGAAGATGGCCATCGCCGGCAGCGGGAGGGGC
AAGGCGAAGCCCGCCGCCAGCGCCAA