Contig Data
morexGenes
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Map Locations of contig_1580799 (3820 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1580799

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18499 1 1606 bp MLOC_18499.1 Available Available LOC_Os06g48160.1, FRAME:-1, EVALUE:8e-177, 13106.m05119 protein glycosyl hydrolases family 16, putative, expressed





CDS Structure of MLOC_18499






Contig Sequence (3820 bp)

>contig_1580799 3820 assembly3_WGSMorex_rbca.fasta
CAGAGGGTGGCAGGCGGGAGGGTGGGTGGGGGAGGGCGGAGTCCTCGTGGGTCGCTGCCC
GCGATCCGCGGGGCTCGGGTGGGGATTTGTCTAATTTTTTATCGCTTCAATGCACCAAGT
TGAATGTTGCGAAGGTTGACGATGAGCTGCTGCGTCCCGACTTAATCAGACGGTGGAGAC
TGGTTTGATCGGACGGCTACCGAGGCGGTTTATGACTGAAACAAATCCATGGGTTGATTT
ATAGGAGCCGTCAAAATATATGTAGCACGGCACGATTATACTAAAAAACGGGGCGGCGGT
CCATTGGGCAGCACGGCACGATTTGCCGTGGCCCAAGCACGATGGGCGTGGATCGAGCAA
GCACGGCCCAGCCCGAGTCTCAGGTTACGGCGTATTGCAGTCCTGTGTGTCAGACTGTCG
AGGGCCCTCTTGCTCGCGGTGAAAACCGAGCGTGACGAGTAGTATAGTTACCGCTCGATT
AAAAATTTCTGGGTATTTTGGGTGAGAGTGACACGTCCTACATGAATGTTTGGGTCCTCC
TCCTGTCGGAATTGTTTTGTTCCTCACGTGCAGAACGAACGTGTCGTCCTTCCTCTGTTA
GAATAATCTAAAGCCGGATAAACTTCCCCTCCGCAATGGTCCAGATTCACAGCTTGTCCA
TGTCCAAAGCCCACTTTGGCCGCCTTCTCCTAGTTCTGTGCCTCCTCATCCCCACACATG
AGCAAACAAACACAGCAACCAAGTTCTGTTCAAGGCTAAAAGGAACGGGCTAATTATAGA
ACTTGCATAAGTACGTACATGGATCGATCCCGCGTAACAACAGACACAAATGAAAGAATG
CGATATGCATGCTACTACTACGGTACGTACTACATTTACATCATCCGACAGTGCTCTGAT
GCGCGCGCTTCCTTGGTTCTCGTAGACCGAAAGCCGAAACCAAACACATCTCATGGTTCA
TGCGTTGTTCTTGTAAAGCTGCTGCAGCTGGAGGATCCCATTCTCATCAGCGGAGCTTGC
ACTCGGCGGGCACGCCCTGCGCCACCCGCTTGGGGTCGGTGCAGTAGTTGTAGATCATGA
ACTTCCTCTGCACCCACCGCATGCGGCGGTACCCCATGCCGCTGAGCTCCTGGTTCCACC
AGCTGCCGCCGCCGGCCGCCGAGGCCTCCATGGTGCCGGCGGGGCAGCGCTGCGCGCCGC
CCGACATGACGCAGGCGTCGGCGTTGAAGTTGCGGAAGGAGGCGACGAACGGCGCCTTGC
TCCAGTCGGTCTTGACCCGGCCGCCCTGCGTGGCCCAGTCGTCGGCGTTCCACAGGCTCG
CGTACAGCCGCATCGGCTGGCTCTTGGGGAACGACACGCCCCGCGCCTCGTGGTTCTTGA
AGTCCCTGATCGCCGTGCCGTCCACCGCGAATCTGCACGCCCGTCACCGAAACCCTTCAC
GTCAGCGACAAGCCCAAACACTCTGTCTCCAGAGCGGAAGAAGAGAAGAAAAGGATCCGT
GAAGGCAGCGGGAGGAGGCTTTACATGACGTGCTGCGGGTTCCAGATGATGGAGTAGGTG
TGGAAGGCCTTGGTGGGGTCGAACCAGAGGCGGAACTGCTGCTCCCGCTGCCCCTGCCCC
TGCGCGAACACGTTGGTGTGCAGCGTGTAGGGCTCGCCGGTGACGTTACCCAGGAACTCG
AAGTCGATCTCGTCGTGCGCCGTCCCCTGCGACGACAGCTGCACATTCACACACGCACAG
GCCAAAAAACCATCAGCTTCCATCACATACGGAGACGGCAACGGCGAGTAACCGAGAATG
TACGCTAGTGAAGCTTACGTAGAAGGTGGTGACGGTGCCGGCGGAGTTGCCGGGGACGAG
CTTGATCTGCATGTCGATCTTGCCGAAGAGGTACTCGCTCTTGGACTGGAAGCCGGAGCC
GGAGGTCTTGTCGAGCGTGAGGTCGAGCCCGCGGCCGCCGTCGACGACCTTCCCGCGGCC
GTCCCCCCAGGACATCTCCGAGTCCTGGAAGAAGTTGCCGGCCCGCGCCACCGCGACGAG
GCACGCCATGGCCACAATGCCGAGCTCCACCGTCCTCATCTCGCACCTCGCTCTACTCTA
TCGATCTTCCCTTCTCGCTGCTGCTACTACTCAGGGAGTGAAGTGTGGGTAGCTGAGCTG
AGCTGAGCTAGGAGGAGGTGGATGGATTGGTTGGTTGGTTGATGGATATTGGATGGATTG
ATCGGGCAGTAGGGTGGCGGTATTTATACGGCCGGGGGGTTGGGTTGGGTTTGGACAGGC
TGTGGGTGTGAGTGGCGTCCAACGGGCAAGTGCGCTGCACGGCTGGCGCGTCTGCGGTTT
ACGGAGGGAGTAAATGGCGTTGCGCCGTGGAGCGGGTGGTTTCGGGGGTCGGGCGCGGCG
GGCAGCTGGAGGCACCCTGGATCCAGCGTCTCCCCGGGGGAGGAGTGGTGGGGCCGCGCG
GGCGACTTTACTTGACCGCGTCCATCCCAACATCCATTCCCATCGGCGCCGCGGCATCCG
AGAAAGCGGGCGGGCGGGCGACGTGACATCGTGCGGCCCGGGACGGGCGGGTAGATGTGG
AGGAGCGCCCCCGGGTAGATGGGCGTGCGCAGCTTTTGCGCAGGCTTGGATGGCGCTTTT
GCTCGCCACTCCTCCGGCACGGGCCGTGTGGGCAGTGGCTTTACAGTTCATGGCCTTCTA
GATCGGCAGCTCGGGCAGCTGCGGGGTGCGTGATCCGATCCGGCCGTGGCATGTGCGGGC
AGGTCTGGGGTGCCGGGGAAGGTTCGTTCGCCTGGTTTCCCCCTTGCCGAAGCAACGGAC
TTACGGACGCCGGGGCTGGCTGGCATGGCATGGCACTATGCCAGTGCCGGCCTCCCGTCT
AGTAGGGCATTCCAGATCTCCGGTGCTTGTGGTGTACCGCAACTCAGTGGGGGAAAACTG
GATCCGGCGGACGGATGCAGATGGTGAGTGGTGGGCTACGGTGCATTTGCGTTCTGTATT
TTGAAATGTCTGGAGGCCCGCATTTCCTGGTTGGGAACCCGATGAGTACAGTATGATTCT
CCAGTGCTCTGATGGACAAGCTGTCGTTGGGTACGGGTGCCCTGCCCTGATTTGGACGCC
TCTGCACGACGAGCGGACAGCCTCGCATTTGGACTTGTCTAGGCGGGGGACACCAATTTC
AGGTCCTTTAATCCTTACCCTACCCTCCTAATGCATGTTGTAGTAGTATGTCGTATAGCA
GCTGGTGACATGCTTCAAAGCTCAAACACGTCCCACTTGACCCTAATGGAATCAGCGCAT
GATGGAGTATCACACTAGTGTATGGCCCCGGTTTGTACAGTCCGTCAAATTTCAATTAGG
AGATGCATGTCTGCACATTTCATCTCATTGTGGAGAGTAACTAAAATTTACTAGTCTATG
TTACTATTTTCATAATGGCTAATGTTACAATTTAATAAAATAGATGATTTCATTTATTGC
TTTATAGAGTCATTTTATATTCAAACATGTTATGTGATTTAACATAATATGCTACTTTAT
TTGTATCTTTTCTCATTAACCACCTGCAACATCATCATTTTTGTTTAGAGCAACTTCAAC
TCGTGGATCCCAAACGGACGCGCATCTACTTTTCATCCGCGTACCGACACATTTTCGATC
CATTTTTAAGTCTGATTTGCGTCGGCGCACACACGAGACGTGCGGACGTGCTGCGCGCCA
ACTACTTCCCCTAGCCCACAAGTCGATGGCAAATCCTCCACCATTTCCCTCCACTTTCCC
ACAACCCTCCCGCCCCCCCGCGCGCTCCGCCCACCCACCC