Contig Data
morexGenes
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Map Locations of contig_1580700 (3086 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1580700

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18474 1 1882 bp MLOC_18474.1 Available Available LOC_Os08g04540.1, FRAME:-1, EVALUE:0.0, 13108.m00435 protein decarboxylase, putative, expressed





CDS Structure of MLOC_18474






Contig Sequence (3086 bp)

>contig_1580700 3086 assembly3_WGSMorex_rbca.fasta
TCTGTTGTATAGCTTCATCTGGGCGGTGGATGGGGGACTGGTTGGCAGTACCGATCGAGT
CATTCAGTATCAGTCAACTGTAGTCCTACTTTAGTACTTCCACTTGCATACCTGTTTTGC
TTTGATTGAGTCAGAACGTTGATTAAACTTCGTTCCTACTCAAACATGATACCACCTGTC
GATCGTCCCTTCATCTAAATGAATGGACCATTTAATTATGCACGCCAGCGTCAAAACTCT
GTCCCCGTGTTTTTCCTGTGTTAATGCGGCGGTGTAAGCACCATTAATTCAGACGTGCAA
GTATATGGTCGATCTGGACTCTGAAAATGGAATTGCATGGCAGATAGATAGGACCAATTT
AATGGGAAGTTGGGAACCCACCTGGCATCTTGAAACCTAAAAACCAACTGACTGCAACGT
ATATTTGTTGATTGATCGAGATGCGTGGGCATGCATTCGTCACTCGCTAGTAGAGTACAG
TGCCAAATCCAGTAACTCGTGTTTATCAATATATAAGCACTTTTACAGTCTAAATCAATT
TCTTTGGTACCGGCCTGCTTTATATATATCTACGGTCGGTCTAGATCACAAAACAGAATA
AGAACCACATCTCCGAGTAATCAGAATCAAATCAAACGAAGGAAAATGATAAATTTAAAA
GAATATTCAGACCCTAAATATAGGGATTTGTGTAGCTCCTCGAACTTTTTGTGTCTGTAG
GTCCCTCCACTTAATCTATGATACTGCTCGCAGTCTTCTTGATGAGGTCCCATGCATTTC
TTACATGTCTCTCCTCCTGCAGTGATGACCCAACGGCAAATCGGAGCACAAATTTGTCAC
CAATCACCGTGTGCGCAAGATAAGCCTTACCGGTCTTGTTCAGATTATCCATTAGCACAC
GATTGGCCTCATTGGTATCCTCCTCCGTCATGGCTCCACTTACCTTGATCCTAAAACACA
CAAGAGCAAAGTTCCTTGGTACGACCACCTCAAACCTGTCGTCAGCACGGACGGAATCTT
CAAACATCTTGGCCATGGCAACATCACTACGGATGTGTTCTTGGAGCTTTGCGGTACCAT
AGGTGCGCATGACCATCCAAAGCTTTAGCCCACGGAAGCGCCGACCGACACCGACTTGCA
TGTCCTTAAGATCGGTGACCTCACCGGACTCGGTAGCATCATTCTTGAGGTATTCCGGGT
TGGTCTCCAATGAGTCGCTTAGTCGATGAGCATCACGGACATAGAGACAGGTGCAATCGA
GGCATGTGAGAAGCCATTTGTGTGGGCTCATGCTAATGGAGTCCACACGCTCAACGCCAT
CGAGATGATGACGAAACTCCGGGCAGATACACGCACTGCCAGCATAGGCAGCATCGACGT
GGACCCATGCATTGAACATTGCAGCAACATCAGCGACGGCGCCCACTGGGTCGACGGCGT
TGGAAGACGTGGTGCCCACTGTGGCACAAACATATGTAGGCACGAGACCGGCGTTGGCAT
CATCTTGCATTACCTCGAGAAGCTTGGTTGGGTCGAGCCCGTAGTTAGTTTCTGGGCCTG
TGGGGATGGAGCGGATGTTGGCGGGGTCGAAACCTGCGAGGCGGCATGCCTTGAAGAACG
TGGAGTGGGTCTGGTCGGCAGCATACACAACCAAGCGTGGTATGTCGGACACACCGACGG
AGCCGCACCGACGCAACGCTGCGTCACGGGCGGCGACTAGTGTGACGAGCATCGCCTCGC
TCGTCGTGCCGAGGATGACGCCACCACCGGTGCCACGACCAGTGCTGGTGCGGTTCATGA
AGGTGGTGGGTAGACGTAGAAGCTGTGCAAGCCAGTCGAGAGCGAGAACCTCCATCTCGG
TGGCTGCAGGCGAGGCCTGCCACGTGAATCCGACGGTGTTCATCGCAGAGGCGATGAGGT
CGCCGGCGATGGCAGCGGCGCTGTTGGTGGAGGGGAAGAAGGCAAAGAAGTTGGGGCTAG
CCCAGTGCGTCATGCCAGGGACGACGGAGGTCCTAAGCTCCTTCATGGTGACATCGAATG
GCGCGGAGTAGGTTGGCGGGGACGCGCTTAGCTCGTCTTGCAGGTATCCCGGCTTCACAT
TAGGGAGAACGGGCATGGACTCGATGTTGGTGTAGTAGTCGGAGATGAAGTCGACGGCCT
TGTGAAGGTATGCGCGGACATCTTCGGGGTTGAGCGGCTCGAAGGCGGCCTTGTCGTTGG
GCAAGGCGGAGAGGGACATTGGGTTGGTGTCCAAGCTGCCCATCTTTGTAGGAGCAAAGG
AGGTAGAGGCTTGGCTAATGAAGTGGAGGTAGCTTGCTTTGCTGCCGGAGAGCAACAAGT
AGAGAAGAGCTAGTGCGAGTACTTGGTAAGTTAGCTGGCTAGCTTTGCTGCTCTGGTTTG
GTGATGAATGGAGTTCGTCCTTGCTGAGGGGTATATATAGGTGATCAGGTGGACACGGGA
AGCGGCGTGGCGGTGTGGGCGTTGGGTGAGTCTCCTGGTCGCGCGCGCTTACGTACGTAC
GCTGCCACGAAAGTGCATGGGTAGGTAGAGATGCGATCTCGAGCGCGCGCAGCTCGTTAA
ACGAGTCGCACGGTCAATTCGTTTGTTCAATCGGTACAGATGCACTCGCACGCAGGCGAC
CAGTTATGTTGCGTTTGTTAATTGGCCACTACGCGGCTGCTTAAGCTGCGTGTGTGTGTG
TGTGTTTACGGGGGGCAGCTGCTTAAACTCTTCGAGCATCTCCAACAGCAGACAAACATT
TAGTTACTTTAAAAAAAAAGAAGATGACCCCGGCCTCTGCATGTGGGAGATGCATGCGAC
CATTTTATTGATTATTCTTGAGTACCTTACAAAACACTACAACAATATGCCTGAATCCGC
CATCTTGACAACATTTACCGCTACTCCTATCCATATGATGAAGGGGTGCAAGGTGGACCA
AATACCCAGATCTCCCACCTAAGCCTAACATCTAAAGCCGGAGGTCCTGACCGAGCCACA
TACCGGGTTCGGGGCACAAACCGGTCCGACGCACTCACATGTGTCGCCGCCGTCATCTTT
CACTGGTCCATCTTCACATCAGATTG