Contig Data
morexGenes
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Map Locations of contig_1580694 (3852 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1580694

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18471 2 1609 bp MLOC_18471.1 Available Available LOC_Os07g48630.2, FRAME:-3, EVALUE:2e-81, 13107.m05212 protein ethylene-insensitive 3, putative, expressed





CDS Structure of MLOC_18471






Contig Sequence (3852 bp)

>contig_1580694 3852 assembly3_WGSMorex_rbca.fasta
CCGGTGTCGTTGGCGTGTGCCGCTTTCTGCCGGGGCGCGGGGCCGGGGCCGCCGGCCCCC
CCCGCCTCCTGCCACCACGCCTCGGACGTCCCCTGCGGCCACCACGGCGGCGGCACGCCC
TTCTCGAGCGGGAACCGGCGCTGCGGCGGGTCGCAGTGCTGCATGAGCGACGAGAGCAGG
GAGCCCAGCGTGGTGTCCTGCAGCTCGTGCAGGGAGCGCGGGCCGGCCGCCGTAGCTCCG
TCGTCCCCGCCACACGGCGGCGCGGCGTTGTCGGACTGGTGCTTGGCGATGGCCGCGGGG
GCGTTGCGGTCGAAGCGGACCTTCTCCTTCCACCAGGCGCGGAGGTTGTCGGAGGCGCCG
CCCACGGGCTTGCCGTTCTCGGGGACGATGCCGTAGACGAAGCCCTGCGCGCTGCACGCC
TCCATCATCTTGAGCATGTACTTGAGGATCCCGTCCTGCGCGCGCGACATCTTCTTGCGC
CGCGCCTGCTGGTCCTGCTGCGACGGCGGCCGCCTCAGCCGCCCCTTCCCCGCCGTCGCC
GCGCCCCCGTCGGGCCTCTGGCTCTGCCGCTGCTGCAGCTCCTTGAGGCGCTTGAGCCTC
ATGCGGTCGCGCCACATGCGGCGCTCCAGCTCCTCGATGCCGTCCACGTCGTCGTCGTCC
TCCTCCTCCTCGCTCTCGTCCTCGTCGGGGAACCTGTCCCGCGCCCGCTGCTCCGGCGCC
GGCGCCTGCACGGGGTCCACGAGGTCGCCCGCCCCCACGAAGCAGCCGGCTCCAAAGAAC
CCGAAGCCCTTGTCGACGTCGCCGTCCGCCGCGAACTCCATCCGCCGATCCATCATCGCC
ACCCCTCCTCCCATCATCTCCACCGCACACGCACGGGCACGGCACAGAGCCCCTACGAAG
CAATCAAGCAACCCCTCGCTCCTCACCAAGGCTCGTGGTAGCGGAGTCTATGTAGCCACC
TGCGCGCAAGCTACACGACGAAGAAACAAAAGTGAGCACGCATGGACTCTAGAGTGGCAA
GAACATGCGCCCATGGAGCTAGCAGCAGAGCAGCCAAAAGAAATGGAGCGGCAACAGACA
CGGATCAGAGTTTGCGAGCCACGAAACGGCCAAACTGGTTGATCGGGAGGCCTCGTGACT
ACAGTCGATCAGCCGAAAAGTAAAACAAACGGGATCTTGGTTGGTTGGAAGTAAATGCGA
TCGTACCTCTTCCTCTTTACAGCATCTATCGCTGCATCTCTGGTTTTCGCTTGGCTTGGC
TTGGCGGGCGGATGAGGAGGGTGGGGAGGAGGAAGGAGGCGAGGAGGAGCACGTTTTGTT
GGGGGCGGAAACAGGAGATGGGGATGGGGAAAGAGCAGCGAGTGAGATGGCCAATATATA
ATGGCCGGCATCTGGATCTTTTTGACCAGCGATTTTGGCGATGACCTGCAAGTTGCATCG
ATGATCGGTCGAGCGAGCCATCGGGGTCTCCCGTCTCCCCCGTGGTCTCGCCATGGTGGG
CGTTGCACACGTGGTGGATGCTCCGTGCCTTATTAGTGGTGGCGTGAGTGTGAGGGTTGT
GTGCAGTTGCTGGTGTTTGCTCCTTTTTTGCTAGAGGGCGTGTGCAACCGACTGGAAAAT
TTCCAACGTTTCAATAAACTTTCTGGGGCCTGCTGTTAAAGTGCAAGCATGCCATTCCCG
CAAAAAAAAAGGTGCAAGCATGGCATAGAACTATAGAAGTTGTTTAAAAGTTAACAAAAA
TGAAGAACATGATACATTAGTGGTGGCATTTTCCCGAATCACTTCATGCCTTCCTCTCAT
GAGGAGACATTCCCGTCGACTACGAAGGTGTCTGTGATGGTTTCATTAATTTTAAAATAA
TATATCGGTTCAACCTTTCGAAGTTGCTCACAAGGCTAAAGAGTCAATGTGCATGCGTGT
GTTCATACGGATGAGTGTAATATGCATACGTACGAGGGTCTACAAAGAAATAACAAAATA
AAATGTATGCTCTGTTCCATCGCGGAAGCCCTCTCCTCACCAACAACTATCGCCACACCG
CGGCTTGGTGGTGAGGTTGACCATTGCGTGCTAGGCAGCCACACCTCGGGACCGCGGTCC
TATGCTAAGGCTCTCTTGACCCCGTCCATTGGTGGTCCCTTGGCTCGTAGGACCACGTCG
ACTCACGATCGTGTCGGGCAATACCTTCTTGCTGTGATGCTCTTGGTTGGGTTCATGGAC
ATTGATGTTTCACTGCATGAGGAAGGATCATATGCTCAATGAAGCCTTGATACCGTCTCC
ACAGGTTGCACATGTGGTCAAGTGTCTCGCAAGCTGCTCGACTAGTGTGATGATGTGTTG
TTGAACTCTCGAGTTCTGTTGGTCGAAAATGGGGAATTTTTCGAGCGCCTAGGGTGTCTT
CTAGTCGAGGAAAAATTGTCAAAAAGTTTTGTACAATTTGGATCCTGTTTGGTATTAATT
TTCTATAAAACCAAAAATAGATAGAAAATAGTAACTGTCACTAGGCATTGGGTTAATAGA
TTAGTTTCCAAAAATAATATAAAAATACATATAAAGTATCTAAGATTGATAATATAATAG
CATGAAACATTCAAAAACTATAGATATGTTGATGACGTATCAGCATCCTCAAGCTTAATA
CATGTTCGTTCTTGAGTAGGTAAATGATAAAAGCAGAAGTTTTAATTTTGAATGATACCT
AGCAAGTTTATCATGCAATCTCTTTCATGTAATGAATATTGAGAAAAAAATGAAGTAATT
GATACCAACATTATAATATTCATGAATATAAGAGCATAATCATTACTATCCAAAATATAC
AATGCCTACCGAATGTTATCCCTACTCATTGAATTACGTAAGCATGGCATGACTTTGTAT
TCCTAACATAAGTATTAATCATGAGCACCATGTTCTCAAGTCAAGCAATTGGATCATACC
TTTTCACGCGCTCCAATATTTTCAACTCCACAAAATACATGAGTGCGGATCAACGTGCAA
TGAAGAGGCCCATCAATTGATATCAATACGAGGAGTATGGATTGCCATGCAATGGATGCA
CTAGAGTTATAAGTATATGACTGCTCAAAACCGAAACTAAGTGGGTGTGCATCCAACTTG
GTTGATCAAGAAGACCTCGGACATTTGAGTAAGCTCATCATCGAAATAAGCAAGCCAAGT
TCTATAATTATAAATTCCCACTAGTATATAAAAGTGAAAAATCTGAAGACTCTCTATATG
AAGAACATGNNNCTACTTTGAAGCACAAGTGTGGTAACAGATTATAACACTGGCCCTTCT
CTCTTTTTAACTTTTTTTTATCAAATTCCGGAACCTCATCCTCATTCTTTGGAGGACTCA
TTAGTCTCCATCATTCTTTTACCTCACCGAGATAGTGCTCTAATGATTGATGATCATCAC
ACTTTTATTTAGTTACAACTCGATAAACCTAGAACAACATGAATTTATATGAATGCATGT
ACCAGGATGTGCAATGATCTTACGTAACATGTACTACAATGATGAAGAGTGGCTTTGCCA
CAAATATTATGTCAGCTCTATATGATTGTGCAAAGCAATATAATTATGAACACACATGTC
ATGAAGCGGGACGGTGGAAATTGCATGACAATATATCACGGAATGGCTATGGAAATGTCA
TGATAGGTAGGTGATACGTCTCCAACTTATCAATAATTTTTTATTGTTCCATGCTACTCC
CTCCGTTCCTAAATTCGTATAACTTCTTATAATGTATGCTTTAGGAAGTTATAACGCGGC
GCTTGCCAAGCCTCTGCAGGAGGAGGCAGCGGCGGAGGAGTAGGCAGAGGGGGTGGTGGC
GGCATTTCAGCA