Contig Data
morexGenes
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Map Locations of contig_1580577 (2799 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1580577

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18437 1 1628 bp MLOC_18437.1 Available Available LOC_Os08g43540.1, FRAME:-1, EVALUE:2e-11, 13108.m04717 protein peptidase, T1 family, putative, expressed





CDS Structure of MLOC_18437






Contig Sequence (2799 bp)

>contig_1580577 2799 assembly3_WGSMorex_rbca.fasta
TATTTAGAAACGGAGGGAGTAGTGTAAGTAACTACAGTTAGGCCCATTCTGGCCCAGCAA
GCCGAGCAGATTTGCGAGGCTCCCTCCTGGGCCGGTCCTTGCTCTGGGCTTTGTCTTCCT
GCGTCGCCTCGTCGCTGACAGTTAAACAAACGACAACTAGGTGGCTGCTATGTGGCGTTC
TCATTGTCTCGTACGTACGCCCGTTGCAGCAATCCATTTCTTCCTTAAACCTGTAGCATA
GATATTTTTTCAAGAAAAATAAAAGTAGCACACAACTAGTGCCGATATGAAACTAATATT
TTAAGGAAAAAAAGAAAAGAAAAAATTTTTAGCATACACCAGCCTTTATTGCTCCAATCC
TTCACCTAGCTCCAAGGCTCCAATCTGCAACGCCGTCTGCGGTCTCTCTTTTTTCTTCTT
TTTTTTAAAAAATGGCTACTGCCTGATACTACTATTAGGAATAAGTTGTAGGATAACTCA
GCCCACTTCACATCCACGGCCCCGGTAACGGCCATTATAGCTAAGCTTACAGTTCGCACA
TGACGGGATCAAGCCCATTAGTCCAAGCACCTCCGTCAGCAACAAATAAACAACCTTCCG
CCAAACAAGTTCTTCGGAAACAGTTAAGACAAGCAGACAAGCTGTGAACATAAATAGAGC
TAGAGGAGCCATGTGCCACGACTGTGCTAAATCATTAGTACATCATGTGTCTTTCGGGCC
ACCCTTCTTTGCAGCCTCAGCAGCAGCCTTCTCTGTTTCGATCTCAGCAACGTACTCATC
GATCTCGTCTTCCTCAAGTTGGCGAAGACCATCTTTGTGCGTCATCACAGCGATCTCAAT
GTTCTTGCCACCACTCTCGACAACCTACAGAGAAGGAGGAGATCAATTCTGTGTCATAGC
GACAATATAATTGGAAGACAAACCAAATATTTAGGCTGAAGATACAAGAGGATATGCATT
CAAACACATGACTAATAACTGTGATTAATTATGGTGTTCATTTGAGATGTCATCTCAGAA
GGAAAAACTTGAGATGTTACTTAAGAAAGATTTAGGCTGAAGATGCAAGAGGATATGCCA
CTCTCGACAACCTACAGAGAAGGGGGGAGATCAATTCAGTGTTATAGAGACAATTATCAA
TACAAGACAAACCAAGATTTAGTCCGAAGATACAAGAGGATATGCATTTAAACATGAAAT
TAACTTTTGCACTTCTCACTGAGGATTTACATGGATTTTTAGTCACAGGCCTGGGGCAAC
AGGCATGGCTGCCCCAAACCTATCCCTGCCCCTATCTGAGATGGAAAATGCCACCTCTCC
AGTACATATTTGGGTTAGCAGATATGCATTTGCCTCTAAAGATAATACATGGACTACGCA
GTTACACATCTTATATGTGCTACAGTACTTCTCTTTCACTATGAATGGGTAACCTCTGCC
AGTGAAGAAGTAAAAGCTTTCTTTCACTAAAGGAGTCACAAAGCATGCCGATTACACAAT
GTGCGGTGAATGAGGGGGCAGTACAATAGGTGACAAAGCAACAATACAGAGTCTACACAT
TTACATCTTCTGTATGCCATACTAAAGCAACAATGAAGTTGACAAAGCACAGCCAAGTTT
TCAAATTTTGACGTACACAAGTAATTAAACTATTGACACACAGAACCGACTTTTGAAAAG
AAAATTATACTGAAATACTTGCAATGACAGTTCTTCTAAAAAAATACTTGCAATGACATA
CAAGTGCAGATGAAACTGACATTGCAAATGCTGGAACCAGTCGGAATTTATTGCTGAGAC
TGCAGGAGCAAAATAACAGACCACGCCTATGAGCATGTATTCTCATTAGTACAGACGAAC
ATGCATCACCCGAAAGTGGCAAGCACACGCAGGAATCACTCCTATCTCACTGTATTTTAG
ATTAATTGTGATTTGAATGCATGATAAGCATGGCCAAAAATAAGTTTGGTTTCATGCCTG
GGAGGTCGACCATGGAAGCCATTTTCTTGGTATGACAACTTATGGAGAGATACAAGATAC
AAAAAAGGGACCAGCATATGATGCTCATTGACTTGGAGAAGGCCTACAATAAGATAGCAG
AATGTCATATGGTGGGCCTTGGAGAAACACAAAGTCTATAGGACGGCGATTCGACCTGCA
ATGTTGTGTGGCTTCGATTGTTGGCCGACTAAAATGCGACATGTTCAGCAGTATAGTGGA
AGCGCGCATACCGAGATGGATGTGTGGCCGTACAAGGATCGGGTCCGGAATGATGATATA
CGTGATAGAATTGGGGTGGCACCGATTGGAGAGAAGTTTGTCGAACATCGTCGAGATGAT
TTGGGCATATACAACTTCGGGCCTCCGGAAGCTCCAATGTACAGCAGACTCACACATCTT
CATCCACTGCCCGCTTGCTCATCGCATATGGGTTTGATATTTATCCCTCAGAGAGTATCG
TGGATCTTTGGGGAAGCCGCTTGCCCCCTCAGGTCGACGCGGTCATATGGCAATCCATCC
TACTTATCGTTCTCTGGAAGATCTGGGACTCCAGGAACGCTATGGCTTTCAGGCAACAAA
ATCACCATAGCATATCCACACTCAAGCGGATCATTGATGATCTAATGCTCTGGACGCACC
GGATGAAGAAAACAGAGCATAAGCAGGCCGCCTTCTCATGGCGTTCCTATCTCCTATCAC
GACTACACGTGCTTATGTAATTCACCTTGTAATCGAACAATGTTGGGTTACAATCATGGA
ATATATTCAGGTGGGGAGCTTCCCCCCCCCCCCCCCCCC