Contig Data
morexGenes
Links



Map Locations of contig_1580565 (4189 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1580565

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18432 2 2100 bp AK365552 Available Available None





CDS Structure of MLOC_18432






Contig Sequence (4189 bp)

>contig_1580565 4189 assembly3_WGSMorex_rbca.fasta
GCAGTAAGCGGCGCGCGATTGCGTTTCGGCTAGCGTGCTGAACTGCATATGCCGCGCGCG
TCGTTTTTGCGCCCGCTGGAGCTAACCGCCGCGTTGCGCGCGCGCTAAAACGGGCTATTT
TGCGGAGGGACGCTAGCTGTTGGAGATGCTCTTACGTGCATAGCATGTGCCTTATACTAG
TACAAATAGTTTTGTGTAGTCAGCACTGATAGACTTCTGAAGGAAAGCGATTTTACGAAG
TTATTTGCACTGTTGGAATGGCCTATTATACTCTTCTGGTCCTAGTTGTAGATCGTACGT
AGGTGGCACATTTCCTATTCGGTGCTTCACGTGCCAATTACAGGCTATTCATTTTTTTTC
ATATTCCTGAGCTTTTTCAAATTTTGTGAACTCTTTTTTCAATTCCAAAAAGGTTTTCAA
ATTTGGTTCAACTTTTGTGTTTGATTTATTAGTTTTTTTTAAAAAAAATGATTATTTTCT
ATTTTTCACGAACTTATTTCATTTTTTTTATTTTTTGTAAAATTCGCGGTGGGGCATTAA
TTGACAGCAACTCAGAAATCAGCGATGCCTGCCGACCGGGCGATAGGTACTGGTTACTAC
TAAAAAACGGACACTTAAAAGCAATGTGCAGAGTGTTTGGAAGCGACACTGATTTGTTTA
AAAAAAGTCACAATGATGTGTTATTGATAGTACGGAATCATCAAATCAACTACCCCTATG
ATCGCAAACCAACTCGTGCTTGGATGGTTAGGTGGACTGTGGTATTCCTTGTCCAGCAAA
GTTCAAGTCTCAGACTTGATATTGGTGTTTCCATTTTACTGAATTTATTCTAGTTCTTTC
GACGATGTGTTTTCAGTGGGAGGAGACGTTTCCGTCGACAACGGAGGCGTCAGTGACGAC
TTCGTTAATCTTAAGATGATGTGCCGACTTAATCTCTCGAAGGTGCTCATAGGGATAGGG
TCCGCGTGCGTGCGTTCATAGGGGTGAATGTACGTTCGTATATGTGAACGACTTTGATTA
TACTCTGTTAAAAAAAAACTACTCCTATCATCCCTATCATCCTAACACATCAAATATATC
ACGCTGAATTCTCCTGGTGCTAATTTTATTACTAGGCGCAGGGCGGATGAATCAGTAGTG
GTAGGCCATGGACTAGGGTCACCATGGTCACTTCTGTGCATCCGATCCGAAAATGAAGCT
TGAACAACCGCGCAAAAGATTGGTGACAGGCGGCAGAACAGTAGAACACAATACTAAATG
ACTGTAGCGCATATATGTAGATTTTTTTTTGAGACATGCATATATATAGATAAAAATTCA
GGCGAGAGTGCCCAGGCCACCGGCTGACGTGAGGCTAAACATGTGGGCGGTCCAGGCCCA
TACAATAAAAAAAATATTCGAGTTAACTGAAATTACAGTTTTATCTCAAAAAAACTGAAT
TTACCGTTTTACATCCAAGCAATAAGGCAGGATTATAAGTTCAACAAAAATAAAATAAAG
CAGGATTATACATGTTTACTGAGTTCTGACAGGTAGGTCAAATTCGAATCTGCCAGTAAT
TTCGTAACCGCAAAGTGTGGACAAAATAAAAGGAGAACCCGGATGAACAAAAGCGAAGGA
ACACACGTGTTATGTTGAGGAATAGTTCATCTCATGCTAAGCATGCTAAAAAGGCCTTCT
CATTCGTTTTGAGGAACAGAGACATGAAAATTCAGTAAAATACCATCGTTCTGGAAAAGA
ATCAATATAGGCCAAGCAGTGACACATCATGAAATCACTAATAGTCAGGGGCACAGCTGG
AATGATTCATGGGTATGCATTTAGAGCAATTAGAAAGAGAATTGATGAATTATACTTATT
TGAATTGAAGAAAAGTCAAGAATTTCTCAAACAACAAGCCTGCGAAAAATGGACTCGCTC
AGTCATATGATCAGGTCTACCAACATCAACAGTGCATCTCATGCCATATTAACGAAATTC
AAGAGCATAATAATTCCATTGACAATTATTATTGTTGTTAACAGGAAATAATCATTGTTA
CAACATGTTGTTCGATTTCTCGATTGTACAAGTGAAATCGATGATAGTTATAAGAATACA
AAATGGGAATGATTTGATGGAGAGGCAGGTTATAGAGTATGGTAAAGGTGTTCTTGCGAT
AGGAATTACCAGTCATGGGATTCAGGATGAGAAACAAGAATATCTGAGACCAAACTATAA
CCTATGTATGTCATGGTCCAGTTCTGCGAAAACAAAAGTTTCCGACAAGAATCACTTCCA
CTGGAACCAGTTCTTCAACTGGAACAGCAAGAACCTTTTGCGTTGGTGGATGGTTCAGCA
ACGTTAATAGTCGTTCCTTGCATCGAACGCCCGTTGGCAGCAGCGGACTCCTGTGCTGCA
AGTGCTTTTTTGCTTACAATCTGGTGAATTTCACTCAGCACAGTATGGAATGCCTTCTCC
ACATTGATTGCCTCCAGTGCAGAGGTCTCAAGGAAAGAGAGGCCTTCTTTCTCAGAGAAT
GCTTGGCTGTCTTCCTCAGGAACCGATCTTAAGTGGTTCAAGTCTGACTTGTTCCCGACC
ATCATGACAACAATGTTGGCATCTGCATGATCCCGGAGCTCACGGAGCCACCTCTGAACA
TTGTCGAAGGTCTGCCTCTTCGTTATGTCAAAGACTAGGAGTGCTCCAACAGCACCCCTG
TAATAAGCACTAGTAATTGCACGGTATCTCTCCTGACCAGCCGTGTCCCATATCTGTGCC
TTCACAGTCTTTCCTTCTATCTGCCGCAAAACAACATAAATTTCTGCTAAGCTTCAATAG
GAAAATATGGATTTAACATTAGTATAAAACATCAATAAGAAAGGTGTACTATTCCGATTC
TAAGATCCACATTGAAAAATTTGCCTGCTTATAACATTGTGTTAATATCATTATGTGAAC
AGATGTTTGCAGGATATCACGACAGCACGTATCATTTTCTCTGAACGGACAACAGGGGCA
ATTGTGATTCTCTATCTGTATTTTCTTTTCTTTTTACTAAACTGCATGTATTACAACAGA
CAACAATATATACTTGGTAAAAAACAAGGGGATGTACTGGAAGACTACTTGTAATATTTG
TTGAAACAAAAATACAGAATTGTCATCTTCTTGCTGTGACTTTTAGGCAGGATCGCATAA
TGATGAGCTTACCAGAACTAACACCAATGATGAGCTTAAAAACATATAGTTATTCAACAT
CGACCAACCAGAAGAGATAAAGAGACTAGGTTTAATTTCTTCTTTCTGCCAATTGCACAT
AGTTTGTAATGCAACTCATAAGGTTGCAATTTGTTGCTCAGTGCCTAACAATTCAAAAGA
AGAAACCGGTTCTATCAATCAATCCAGCCGTTTGGCACGAGGCTTCTGAATCACACATTG
AAGCAAATGTTAGGCGCCAACTGTGCTCTCACATACATGTTGAGGCTTCAGTGTATTTTT
GTCTACCCAAATTATTATGCCCTTCGATGGCAGTGGCAACACGAAAACCATAATAATAAT
GCAATTACAATGGCACAGTTGTTTACCTTTTGAGTTTCTGAACAAGATGTAATTGGTAGA
TGATGTACACTATCCTCTTGAAAAGAAAAACTGAAACCATGCCAACCAGAGATAGTGTCG
CTTTGACAATCTAGCCTGATTACTACCGTAAATGCAAAAGGATCTAAAGAAAGCCCACAT
CTGTATTTTCACGGCATTGCCATGTGCTGTCAGTGTCATGCGGCCAAAAAAGTGCTCCAT
GCTAGGTGTCCGCTCAGGCATGCAGCCAACAACACATTGACCTATGCTCGGTGTCCTGGC
TTTTGACCGCGCAATCAATCATTTATTCGTTCACCCAGATCCCCCGTCCTATACCGTGAC
TGCAAACTCAACCGAACGCTCTGTTCAACAGATCAAACCAGACACAACCCAGCCCAGCGC
GGGATCAGAAATGACGACGGCATTTGCATTTCGATTGACATCTTCTGACGGAAACGACCG
AGCATTTGAGGATCAGATCGCGCACGTGAATCATGGAAGGGAAGGAAATGGATCGCGCGC
GGGTGGCGAGGTGATGGATGGGTACCTACCTGGAGGGTCCGGGTGGCGAACTCGACGCCG
ATGGTGGACTTGGACTCGAGGCAGAACTCGTTGCGGGTGAAGCGGGAGA