Map Locations of contig_1580550 (3748 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1580550

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18431 1 251 bp AK374591 Available Available None





CDS Structure of MLOC_18431






Contig Sequence (3748 bp)

>contig_1580550 3748 assembly3_WGSMorex_rbca.fasta
TCTAAGGTAAGATGCCAAAGCCCTAAAGATATGTGGCTCCATCCTATAAGCTACGAGGCA
GTTTTTAATATGCCCTGTAAGAATATCATGGACACGCTTCTTTTCATATAGGATGGAGCT
ATGTTGCTGCTTTCTCTCGATTTATCCTCTTTTACGCATTCGATGCAATACGGGCCAAGT
GAAGGACATCATGTCTTCATCATCATCTCTTCTTCTCTTCCGAATTTGGTCAATGATTTC
GGAATTCATCTAGGCACTAAAACTAGAATCGGCAAGCAACAAGCAGCATAATAAATGACG
TGTAAGATAACACATAATCACTCATATAAATATATATAATGTAGAAATCTAGTTGGGTGT
CTCATTTTACACAAATGTCAACAATAAGTTAGCGGTGCCTAGAACTCTAAGTCTTCAACA
ATTCCTGAACTTATTATGTTGTGAGTGAGATTATCTCGGAATTCATCTCGACACTAAAAT
TAGAATAAGCATGCAAGAAATAAGAAATACATTTGACGGTTTACTTGACTTGAAGCAAGT
TTTTCATAGAGACATCATAGAAAATCATAAGAGGTCAAGGAGTGCCGAAGTTAGGCGTCA
CAACTGGATCCCAAGATGGAGGCAACTTATCCACCCCAACAACACACCTAGACCGGCGAG
GACCAGACCGATCCATCCGGCGGATTCCGCAGCACCCATCGCGGAATTGACGGATCGAAC
GCATATTGCCAAAATCGAGACAGGAGGGGGAGGAGGGGAGGTGCGAAAATGACTTCCCAT
CGGGGAGAAATCCAGTTGGGGTCACCGGAGGAGTTTGCCGGCGTCGAGGGGTCGACCAGC
GGGTTGTCGAGGAGGATTCAGACGGCGGCGGCGGCGGCTGGCAGCGTGTAGAGGAGGGGT
CGGGCGACGGATCCACGAGTCCACCCTCGAGGGCTCTAAAGCGCTTGGAAAGTGAGGGGT
CGGTGAGGTAAGAGAGGGATTGGGCTGAGGAAATCCCGCACACCAAACGGGCTCTCGGGG
TTTTGCGAGGTTTGTGGCCCACGCGAGGAAAATCCACTCAAATCCCTCCTAATCCCCCTA
ACCAAACGAGGCCTTATGAAGAGACGTGCGTGATAACGTGTTAAAAGTAGAGGACAAGAG
ACAAAACATAAAAATGTAAAAGTGAATGTTATTCTCATTGATAATGGATTACACACATAT
ATATATGACTCCGGAGGGGTGCGTTCGAAGGGACACGAGGCAACCGTCTCGGTTAAAAAA
AGTAGCGATTAATAGGATTAATTAAATCCCAACAATATCAAACACATATATCCTCATTTT
TTTCACGGAGTTTTGGAGGAGTTTTCAAGATGAGAAGGTTTACAGTAATAAACAACAAAC
ATGGATTAAGGAGAGTGTTAGGATTTAATTAATTCTATTAATCCCTACTTTTCCTAGTCA
AGATTGTTGCCTCGTGTCCCTTCTGACGCACCCCTTGGGGCTATATATATGTGTGTGTGT
GTGTGTAATCCCATCATCAATGAAAACAAATATTCACTTTTACATCTCTGTGTTTTGTCT
TTTATTCTCTACTTGAAACAAACGATTAATCTTATTGGTCCATTCATTTAGATATCTGGC
AGCAAGTATGATATATATTACTAGCATCTTTTCCTTAACACATAATGCACTTCTCTCTGG
AGTGGTGAAGGCATTCCTGATCTGTTTCTACTATTGGTGCAATGGGCACAGAAGACGATG
GAAGAAAAGCTTACTTTTGTTGATGAAGTCCAGGTACTGTGCATGTATGAGTTTACTAGT
CATCACTGTAGAAGAATTCACTTGCATGATCTTATCTTACAGTATTCTGTTTCAGTGTAC
CGTGCATAAATATACTTGTCATTGTAGAAGAATGCAGTCTTATGATATAATCTTATTGTG
TGTTAGTGTACTGTCCTGGAAGTCAAGGTCATCGAAGGTCATGGCTCTACAGTTGATGTT
GTGCTAGTCAATGGTATGCTCCATGAAGGAGATCAAATAGTCGTGTGTGGCATGCAGGTA
AGAATCTTTTTCGTGTAATTGCACTTGCTGCAGCAAATACATCACCAGCATGAAGATTCA
TTATGTTCTCGTTCTATCTATTTAGGGACCCATTGTGACAACCATCAGAGCTTTGTTAAC
ACCACACCCCATGAAGGAGCTTGAGTCAAGGTATGTGGCTCATTATACTGTACTTGCGTT
TAATTTCTTAATTAGACCAATATATTGCTTTTCAACTAGGCTGTCACCTTAAAGATTCAT
TCTCTTTTGGTGCTTTGATGACTTGGGACCTATTGATGGTTTTGATCAAAACATTTACAT
ACTGGGAGGTTTAGAATAAATTGCAAAAAGCCATCATAATTGGGGACTCGAAAACAGAAA
ACCGCCACCATTCATTTTGTTTTCAAAAAACCAACATCATTGTACTGACAGTTTTCAAAA
AACACTGATTCATTGATTTGCCGTGTTTGAGTGGATTTCTCACTCATGGGCCCTACTGTG
AGACGCCACGTGTCCTGGGTTAGACGGCGCCCATGACGCGCCGTTAGCTGGCGTCTGCCA
AGACCCAACCAAGCGATTGAAACCTAGTCGGGGCGGCAGAGGCACAACGGGCTGAGCTGG
CGGTGACGCGACGCGATGGGTCAAGCACGACCGCACGCATGCCCAGACTCCCCGCCGAAG
GAATAGAGTTCTACCTTAGCTCATGGTGATGCTCCGGGGTGGCGAGGGAGCGGTTGGCCG
AGCAGGTGGTAGTGCAGCGCGGTGGCTCAAGCACAGCCGCACGCCCCAAACTACCCGCGG
AAGGAATCGGCACGGATGCCCCAGATGGAACGCATGTGTGTCGTTCTTCCTCACCTCTGG
CAAACGGCCTTGTCGTGGATGTGCTCCACTCCGACTAGCTCATCGCCTATTCTTACCACC
ATAAGCTATGCCTTGACCTTGCGCAGCTTCCAGACAAGTACTCGGCGACCCATTCTGCCT
CGAGCCACCTTGCGCTGATTCCGCACTCCGGTCGCCGCCTCCGGCGACCATGGCGTTGCC
CCCGCTGACAGCCGACGCGGATTTGAAGATGCGGGAGTTTTGCACGTTTGCATTCTGCAT
CGACACTTCATCTCGTTTCCTCCCGCGCAAGAGTCCTTCCTGATCTTGACACCGCGAGCA
ACGAGCTCTCCCACGAGCTCACGAAATGCTCGGCGGAATGCTAGAGAAAGGGATGAAGAG
AGATGATACAATGACAGGCGGGCCTACATCAAATTAACGGTCCATATGGACGGCGTCAGT
TTTTCTTGCCACGTCATCACTTGGAGGTGGGACCCACCCGTCAGATTTCCACTCAAACGG
TCGAAATCACCACATCAGTGTTTTTTGAAAACTGTCAATACAATGGTGGTGGTTTTTGGA
AACAAAACGAATGATGGCAGTTTTCTGTTTTCGTGTTCCCAATTGTGATGGTTTTTTGTA
ATTTACTCAGAGGTTTATATTATGCATACTTTGTTCAAAAGAGTGTTTGGATGCAGCCAC
AGGAGGCATGCCACACTTTCTTAGTCATAGACTCAGTTTTCAGCCATAACTTTTGCCCCA
TGTGTGCTGGACCAATTTGTCCGCCACAACACAAGTATGAAGGGCAATCAACCATATCCT
AAATACTTTCCACCTGCTGTGGTAGGACTAGGGTTCCTACCGGGCCTCCGGCGTAGGTTG
TAAGGGCAGGGAGGAGGGGAGCGAGGGC