Contig Data
morexGenes
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Map Locations of contig_1580288 (3178 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1580288

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18367 4 1484 bp MLOC_18367.4 Available Available LOC_Os03g36630.1, FRAME:+1, EVALUE:1e-21, 13103.m04000 protein expressed protein





CDS Structure of MLOC_18367






Contig Sequence (3178 bp)

>contig_1580288 3178 assembly3_WGSMorex_rbca.fasta
CCTTCTCCCCTTTTCTCGGCCCCGTCCCCCGGTAGCCATTGCCGCAGCCCCTGGTTGTCC
CCCGCCGTTCGCTGCCGCCCCAGCTCGCCCTCGTTGTCGGAGCGTTCATTACAAGGTACA
GGCTCCCTCCCTCCTCCTTCCCCCATTCTTCTGTCCTCTCCTCAGTCCTCCGTCCTCCTC
CCTTGTCTGCTCTTCCCATCCCTATCTGCTCTCCTTCTTTTCTCAACACCAGCCACAACA
ACCCCGAAGAAGACATCCTGACTCAGTTGCTTTACATGCACGAACCAAACAAAACAACGA
TTTATCCATTACATGCTTGTTACCAGCGTGATCTATTTCCCTTACCATTTACGTTACCAC
TCTCTAATCCAAACACCTCCTATATCTCTTAGGGATCACAGAGCACCAAATGTATTTAGC
AGGAGACCAAAAGATGGCACACGCTGTGAGTAACCTGTAGAAGAAAGCAGTACATGGCTG
TTTGCAATTTAACCATCCCAATCTCAGATCATTCTCGGAATTGTGGTCCACTACTTGAAT
GTCACAGATAATTTGGTGCAGTTTATCTAGTTTAGCAGCAGCAGTTGTGGACAGGTTAGG
GTGTAGCATAATGTCCTGATCCCCACTAAATTGTGAGGCGACTGAACAAAGTGATCGATG
GCAAAAGAAAAACGGGATGGAAACAAGAAAAACGGGATGGAAACCACCCAGCTGAAGTTC
ACTGATCAGTCCAAAAGGAGATGTGCAGACCGTCTCCCAATGAGCATGACCTAGCATCCT
GGACCAACTGGATAAAAGGGACGTCTTCCATTCACTTTCTAGAACTGTCACATGTTCTGG
TGTTGTAATATCTATGAGCACTGACTTTTACTGTACCAGCTTCATTCTAATAAGTGTTCG
TCCTGTTCCAGGGGACTATATCAAAAACAAATTCACATATCATCCATGTTATTTCAATGG
TGTGACTTGATCTGGAGTCTTTTCCCTTTTTTTTCCAGAAAATATGAATCATATGCATTC
ATCCTTTTTTTTTTTGTGTGTGCGTTGGTCCTTCTCAAAAGTCAAAGTTTATTTAACCCT
TGACTTCGTGTAGGTGAAGATGACACTGAAGAATTATTTCCGTGGGCAAAATGATCTGTA
CCTGCTACAAATTGACACTGCCAAGGTATTAATCTTTAACATCCATTTTATTTCTTCTCC
TATCAGTTTATTGTAGCTATTGAGGAAATTACCATTTTTTTGTATCTTCAAATCTATATT
TACTATGGTTTAGTGTACTTATCTATATGGGTGTTAGGACACATGTATAAATTACAACAA
CATTACATGTACAATTTATTATTAATGTGTATCTTAGATTGCAGATGGCTTAATTTATGA
GGCAGCTGATGGCTGTAACTATTTTCCTCATTTCTATGGCCCTGATCGGAGCTTTGCACC
CCTTCAACTAAGTGCTGTTGTCAAGGCAGACAAAATAGAGCTGACGAACAATGATTTTAC
TTGCAGTCTACTTGATGGAGCACCCATCTAATTCTAATGTGTAACTGTAAGGTTTCACCC
TTGGCCCTTGTTTCCATAATTTCCTTGTAAGTTCCTTGCCAAATTTATTGAAGAGAGGTT
GTCCACATGCTTATGCTAGTAATGGAAAGTACACAAATTTAATGTCAACCTTAGAGGGCC
ATGAAATGGTAGTTATGCAAGGAAACAGGGCGCATAGGCGGAGCAGAGCCCTAGATGCAC
GATCGAACAACGCCAGATGCAAGACCAAATAAGAAATTAAATGTCTAACCAATGTTCGTA
CTTTGTGTCTTCGTTGCTATCTAATTAGGTGTCTTTTCACTCTCTAGGCCACATGTAGAC
ATGTCCTGTCCTGTTCTTAGACTTGAAGCCCCTTTACCTATATGCATTAAAGAAAATAGG
AAGGTTTGAAGCCCTCTCCAGGACTTCACATCCAGCGATTACAACCATCTATGAGAGAAA
ATAGGAGGTCCTCCAACATCTTCAAGCAGCTTGCTCGTCTTAAATGGAGCGATTACAAGC
TGCCTGTCTCCTCCAGGCCATCATGGAAGAGCTCTCAACTTGAGGCAGCCTTTAAGCACC
AAGCATTTCAAGCACGAGAGGCTTCCCCATTTCGCATCTCAGCTGATCCATCATCTCCCC
CTTCCGCGGCTGTTATTGATCCCATAATATGGAATTGGCACTCCAGCAACCCACAAATAC
GGGTCCAATCTTGGTAACTGTTGTTGCTCTCACCAATTCCCAGGTATCTCAAGTGGGGCA
GCTGCCCGATTGGTGCAAGATGCACACATGAATTGCAGCCTATGACTTTGAGTATAGAAC
TAAAGAGACAATAGCTGTATATTCCAACCATGTGGGATACCTTCGGCCAAAGAATCCATC
GATAACTGTATATTCCTGGACGGATTATTAGCCGCTCAAAGATCTGAATATTGCCAACGT
CTTCTGAATATGGTTGCTATGTATCTTATTTAGTGCAATATAGTCTCAAACATTTGAGAT
ATGTTTTGTCTATTAGCAATGATTCTGTAGTAACATGAAGCTGCGCTTTCCAATTTAATC
ATCGCAAGCTACCTTAGCTGTGAGAGATGTCCAACTCTTCCTACCAGATCTAGACCTCCA
GATCGAGATTTTTGATCAGCTACCGCCGTCGGCAGTGACCTCACCGGGACCAGCCGTCAG
CACTCCCCTCCCCACCCACACAGCCAGTGCAAGCAGCCAACACCGCCTCCATGGTGCTTG
CCAGAGACCATACCATCCAACCTGCCTCCCAGGGTCGCCGCCATTTTTCATTATCTGCGC
CCGCCATGGAAGAGTAAGCCACCATGACACCATCTGCCTTCCAAACCCCGGAATGGCAAC
CCTGGGAATGCGCCCCCTCCCCGGCCCACGAGTGGAAAGAGGCAGCCACATGCTTGTTGG
TTGTGACCATCCTTTAGGATCGATGACCACCCATTCTGCCCCGGATTTATACAAGTGTGT
GCTCCATGGGCAGCGAACCCCTAGCAAATGGTAGGGTGAGGTGGCCACCAATCCCCTTAG
CTGCTGCCACCCCACCTAGGCTAGTGACCACCCATTTGTTAGAGTTATAATATAAGTCAT
ATACCCCTTTGTATAAGGGGTTTCCTGCATATGTTCCACACCTGTACATGTATATATA