| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_158024
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18354 |
3 |
1597 bp |
MLOC_18354.1 |
Available |
Available |
LOC_Os09g26810.1, FRAME:+3, EVALUE:5e-149, 13109.m02593 protein chlorophyll A-B binding protein, putative, expressed |
| MLOC_18353 |
2 |
1898 bp |
MLOC_18353.1 |
Available |
Available |
LOC_Os09g26800.1, FRAME:+2, EVALUE:0.0, 13109.m02592 protein polygalacturonase, putative, expressed |
| MLOC_18355 |
1 |
281 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_18354
CDS Structure of MLOC_18353
CDS Structure of MLOC_18355
Contig Sequence (7181 bp)
>contig_158024 7181 assembly3_WGSMorex_rbca.fasta
GCCTCCGCCGGGCCGGCCGTGCTGTCCTCCCCGCGCGCCGCGCTAAGCCGCGGGGCGCAC
CAGTTTCACCACCGGCGGTGGGCGCCGCCGACGATCTCGCCGTCCTACAGGGCGTACCTG
GTCGCGCTCTGGCTCGTCGGCTTCGTGCTCGTCTTCCTGTGGCAGAACACCTCCATGGGC
CGCCTGCGGCTCTACAACCGGCCCGATATGCCCAAGCGCGCGCCGTCCGCCGCAGCGATG
GGGCAGTGGGTGGCCTCGCCGCCGGTGTACGACTTGAGGGAGTTTGGGGGCGTCGGGGAC
GGGCGGACGCTCAACACGGCGGCCTTCGAGGGCGCGGTGGCGGCCATCTCGGAGAGGGGC
GGTGGGAGGCTCACCGTGCCTGCTGGCCGGTGGCTCACTGCGCCGTTTAACCTCACCAGC
CACATGACGCTCTTCCTCGCTGCTGGCGCTGAGATCCTGGGGGTCCAGGTGAGGAATTTC
AGCTGCACTCTCCATCTGCTTGCTTAATTTCACAGTACAAGTTTTGACAAGGTTGTATGA
CCAGTCATAAGTGTAGTCGTGGTATAGTTAAATCATTAAACCATATAATGAATTAATGAC
TCACATTACCACTAGAATGACACTGTTCCTGTCCACTCATGCTTAGGCTGTAAATAAATT
ACAGTGATGTCATTTTGTTTCAACCTCAGAGAAAGTTGAACTAGGATGTTGTTACTTATC
GTTTGGCTGTAACTTTTACAGTTTGGTGCATTTTCTTCCAATAAGTCAACATTGACAGCT
TATTGCGTTGCTTACATGTAAGGATGAAAGATACTGGCCATTGATGTCTCCATTACCATC
ATATGGATATGGAAGAGAGCACAAGGGACCTCGATATGGGAGCCTCATACATGGTCAAGA
CCTGAAGGATGTAATTATAACTGGTAGGTAATATTGTATGTTTCCTCTTGTTGCATTTTG
ACTCTCATGATAGTGAACTTTATGTTTTTTCTGTGTATGCTTACTTGCTTAGTTCATTTC
AATGCTTAATTATTACTTTTAAATTTCTGGTTGCATTCTGAAATTAAAGCAAGGAAAAGC
AAAATGTTGGCTGCTATCATATTGTGGCGTGTGTGGACTTTAACTTTAAGGTGGAAGTGT
GTTGGAGGATCCTATATTATGAGACCTCCTTTAACACACTAATTGCTAAACGTAGGAACA
GAAGTGAAATTGGAAAAATGAAGTATCAGAATTTGTGACCACCTGTCTTATAAAATCATC
ATAATTCCCAGTGTGGAAGTATGTTGGACGATCCTATGTTATGAGGCCTCCTTCTAGCTA
TTTGGAATATAAGACCAACGGTTTTGTTTGTTATTCATATGAAGATATTGTTACCTCTTA
CCAGAATAACCATGAATGCGTGTAGCCATGATTGTAATGTGCTAATTTAATTGCTAAATA
TTCTTTCTATCACCTATTTGTCCTGAAATTTGTCAGACATTTAGTTAGTTGAGACTCATC
ATGTGTTTATCTGTCTAATAGGTCACAATGGCACTATAAATGGACAAGGCCAAAGTTGGT
GGATCAAATTTCGCAAGAAGCTCCTCAATCACACCAGGGGTCCTCTTGTTCAGCTCATGC
GGTCAAGTAACATTATTATTTCTAACATCACATTGCGTGATTCTCCCTTCTGGACACTTC
ATGTATACGACTGCAAGAATGTTACAATCTCGGGAACTACTATCCTGGCTCCAATTGTTG
GGGCTCCAAACACTGATGGGATAGATCCAGGTCATTTTTCAACTTCTGCGGTTTACTTGA
TTCCTGAGCTCTTATTCTTTCCAGCCACTGCTTACATTGTTCAATGACCGGATAACAGTT
TAGCCTCATTATGTTCATTGACAATATGAACCCTGCAACTTTGTATTTCCATGTTACCTT
TGTTTCTTAATTTCTTTTCATATGATTCGGAACATTTTATACTCCATTCAGATTCTCAGT
TACTCTTTACTGCTTATGCAGATTCTTGTGAAAATGTGATGATTGAAAATTGCTATATTT
CTGTTGGTGATGACGGAGTAGCTATAAAGAGTGGTTGGGATCAATATGGAATTGCTTATG
GGCGTCCATCTACTAACATCACTATTCGCAATGTCATAATCCGCTCCATGGTCAGGTAAT
TCATTTGTTTTGGTTCACTGCATTAGCCTATATGTTAATTTATCAGTTGAGCGATTTGTT
AACTTGAATGGTGAATAAGAAAGTTAATGCCAAACAAGAAGCTTTTCATGTACAATTGAA
TTTCTCTCAAATCATTATCAGTCAAAGTTTGCCAGATCAGTTTGTTTACATGTTTAATCT
ATTTTCCCTTCTGGACAGTGCTGGCGTGTCTATAGGAAGCGAGATGTCTGGTGGTGTCTC
AAACGTTTTGGTAGAGAATGTCCACATTTGGAGTTCGCGGCGAGGTGTGAGGATAAAGAC
TGCCCCTGGAAGAGGGGCCTATGTAAACAACATTGTCTACAGAAACATAACCCTAGAAAA
TGTCCGTGTTGGCATCGTGATAAAGACCGACTATAATGAGCACCCAGATGAACTGTTCGA
CCCGAAGGCTGTTCCTGTTGTCGGTAACATCTCTTATACGTCAATCCATGGGCAAAGGGT
GCGGGTACCCGTCAGGATACAAGGGAGCGCGGAGATCCCTGTGAGGAATGTTACTTTCCA
TGATATGTCAGTTGGCATACTTGACAAGAAGCACCATGTTTTCCAGTGCTCCTTCGTCCA
GGGGCAGGTGATCGGCTATGTTTTCCCTGTGCCCTGCAAGAACCTGGACCTGTACAATGA
GCGGCGCGAGATGGTTAAACAATCGACACTGCAGAACATTTCTGATATCGACTACAGTTT
CTGACACGGCGGTTTCAAGGTCTCACTGTACTATTTAGGAGTATCCAGTGATCAGCTTAG
TCTTGTTTTACTGCATACACAGGAAATTTTGTTTGTAGCTGTTTACACCTCCCTCTGTCT
CAGGCGTGTATTTAAAGAGGCCAAGACTTGTCTATACTGTGTCATAGAATGGTGCATCTG
TTTTCACATTTCATCCCTGTATTTCTACACATCAATTAAACGATTAAAACTTCACTAACA
ACAATTAAACTTTTTTCTTTGGTTTGCAAAGCCTGTCAAAATGTCTAAAAATAGCGGCAC
TACAGCTATACAGGCAAAACACCTTGTCTCTTGTGGAACAAATCTTATTATGCTAGTCTT
TTGGTGAAGCAGTGGCAGCACAACTTCTTTTGGTTTGATTTTCTCTTTGGCTTTCAAATT
ATATATGGAAAAGGCAGGGGAGTATTCTTATTTTCTTTCGCAGCATGCTCTCTGATTTAC
GGATTCACAGGGGGTGAGAACTGAGGATCAACTTTTTTTTTGTGAGGGAGGCGAGAACCT
AGCTTATTGACTGAGAAAGACAAAGGTTTGTGACACTAAGTAGTGTCTTTCAAATGTAAT
ATAAATAAAGTGTCTTTTATGTCAGGCGTCAGTAGTATATACATATGATAGAAAGGAACT
GAACAAGTATCTTGTGATTTTTTTTTTCCATTGTCAAACAGTTCTAGTCTGTCTATTTTT
ATTTATTTATTATTAGGGGAGTAGTCTGTCAAACTTCTTTTTTCACAGCAGAAAAGTCTT
TCAAGTTAGTTTCCTTCAGTGACATTGAGAAAGCTGTGAGCAACGAACGGGCATCCTTTT
TCTTTTTTTTCAGCGTAAACGAACGGGGATCCAAGTTAGAAGAAGCCCACGGGCCAGTTT
GTACGATGGCAAAAACCTCACAGTTGGCCCGTAATAAAAAAAAATCGCAGTTGGCACCTG
GCGCCCCATCATTGGCTGGCGGTCGATGAGTGCAGCGCCCTCTCCCTCCCTATCCTCAGC
TCCAAGCAGATAACCCACCCGCGGGCGCAGTGCAATTTCCGCCCCTCTCTCCATTCCCAT
GGCGACTCCTCTGCCCACCGGCTCATTCGCAGCATGCAGCCTCCGACCAAGGTAATCACC
GACACTCCGATTAGTCCCTGTCCGATACATCTGGGTTTTTTGCTGAACTTTCCGCATGTT
CTGGTCGAGCCAGTATCCGGGCGTTGCATGCCTCGAAGCCGCCGCTGCAGACTGCTGGCG
CGGCAGCGGCAGCGTGCGCTCCCGTCCGGCGGGGCGGTAGCCACCGTACCGGCGCGACGA
AGAGCAGCCTGTCCACGGTGTGCGAGCCCCTGGGGCCCGACAGGCCCGTCTGGTTCCCCG
GCACCGCCCCTCCGCCGTGGCTCGACGGCAGGTAACCAAACCAATTCATTCCAATATTGA
ATATTCCATCATGCATCTTTCGTGGAGAGTACTGGATTTCATTTCGTCTCTGGCATTCCG
GTGTTGCCATTTCCCTTCAGCCTTCCGGGAGACTTCGGGTTTGATCCTCTGGGGTTCGGA
TCGGAGCCGGAGTCGCTGCGGTGGTTCGCGCAGGCGGAGCTGATGCACGGGCGGTGGGCG
ATGCTGGCGGTGGCCGGCATCCTGATCCCTGAGATCCTACAGAAATGGGGCTTCATGGAG
GAGTTCTCCTGGTACACGGCCGGCGAGCGCGAGTACTTCGCGGACCCGTGGACGCTCTTC
GTGACCCAGATGGCGCTCATGGGGTGGGTGGAGGGCCGGCGGTGGATGGACTACCTCAAC
CCGGGCTCCGTCGACATCGAGCCGCGGTTCCCCAACCGCAAGAACCCCACCCCGGACGTG
GGGTACCCGGGCGGGTTGTGGTTCGACTGGGGCAACTGGGGCCGCGGCTCGCCGGAGCCC
GTCATGGTGCTCCGCACCAAGGAGATCAAGAACGGCCGCCTCGCCATGCTCGCCTTCGTC
GGCTTCTGGTTCCAGGCCGTCTACACCGGCCAGGGCCCCCTCGACAACCTCTTCGCCCAC
CTCGCCGACCCCGGCCACTGCAACATCTTCTCGGTACGTACATGCAGATACATGCTCGGT
TGCTCAAGTCTCCATCGCCAGTATAGTTTTGCTTCTGTGGTTCTCATGCAGAACATCTTA
TGTCAAGTGACCACTGTGCATGCAGGCATTCACGTCCCACTGATCGCGGCAGAGTGGCGA
ACGGTGTTGCTAAACAAGAAGGTTTTTGCCGTGAACCTGAGCACTTTGGCTTTGGGGGTG
TCATCTTGCCCTTTGGAAAATGTGAATATTGCAGTGCACCCGCAGCGGGAAATGGGCCGG
GGAAGATGCTTACTGGTACATGTCTGTGTAATGAAATACTCCAACTTGGGCCAGAACAAA
ATTCTACTCCTACTAGTACTACCACAGACCAAGCAGTAACATCAGAATCGCACAGCTGTT
ATACTTCTTGATACGCGTAATTTTCTCCTTGGTTAACCCTGGACACCTATTTCTATGACC
TTCAATAGAAAACTGACAGCGTCAGATAGCTTGCCACAAACCCAGGGCCAGAGGCAGCGT
GTGCAGTGTATGTAAAACAAAAGGAAGAAGGGTGTGATCGATGCAGGCAATGCGCGCCGC
TCGAGTATGTTATGCTACCTCCGCTTGAGCCGTGAGCTCATTTAGAAACTCTTACCGAGC
TATCATGTCTTCCTTTGAGCTACACGCGATGCGTCAATGCTCTGCGCTGGTCTTTTAAGC
CCAATTATGTGAAAATAAAATACGAGAGGATACAGCTGGTGCTCTTAAGAAGCATAGTGT
CCACGGCTCCTCATGACCACATGACCTCACCTCATGTTGTCCTAGAGATTTGCAATCTTG
GTTGTATTACTTCCCCCGTCTCAGTTTACAAGTCCGGCACATGTATCTAGGTCGTCAAAT
TAATCAACTTAATAAGAGGCATATATAACAAAAAATATATCATTAGAAACTTTAGATGTT
TTATTTTTTAATGATATAATTTTTATATTAAACAATATATTTTATATAAGTAAAATTGAT
GATCTAGGTACACGTGCATGTCTTTTAAACTGTGACGGATGGAGTACAAGAAATTAAGAA
AGGAACAAACGGTTAATGCTCCATCAATTTCGAATCTCCTCTTTGCCTATGACTATTTGA
TCCTTATGCGATCGAATGTTATGAATGCAGAGGCGTTGAAATCAGTATTGGATTTTTATT
GGTCGTGTTTGGATCCATGGGTTAGAGTTAGAGTTGGTTAGGTTGAACTGAACTAACCCC
AAAACATCCAAACAAGAGGGTTAGAATTGGTTAGATGCATCTAACCCATCCAAAAGAATT
AACCCACCCAACAGGTGCTTATATGGGTTAGAGTTAGGTGGGGCCCAAGAAAAGTTAGTT
TTCCCTCTACCTCCACCACACAAATCCTGGTTAAAGGAGCCAAATGATTGGAAAAAGTGC
ATTTGTTGGCAATCTAACTCTGCCATCCAAACACCTCTTTGGTTAAAGTTAGTTCAACGT
TAGTCCAAGGTTAGAATCTAACTCTAACCTCTATCCGAGTTAGAGTATTCAAACAGGACC
ATTGTGCCGCATCGCGACAAATGGTGCATTGAAAAATCTAGTATATTTTTTTAGTCCCAA
TACAAAGCCGAAAGACAAGTTTTAAATTTATACAATTCTAAATGTCGTGACTGAAGCTCT
CAATGATAAATATTTTAGTATGCTTGTAAATGTGGGTATGGACAAAAGTGATTCTTTCCA
ATTCATTATTGATTGAATAATTATGAAAATTAGTGGATGGAAAAAAGGTTATCCGCCAGA
GGCAAGGAATTTTTGCTCAAATTGGTCGTACAAGCTATCCTAACTTATGCCATGTCCATC
TTTAAAATTCCTAATTTATTTTGCAAAGGAATCATTGACGCGGTGTCATAATGTTAGTGG
GGTGACGAGTAAAATTAGAAGAGAATGCGTTGAATGGTGTGGTGGAAGATCTGTGTCCCA
AAAGACCAAGAAAGTATGGGTTTCCGAGATATACATGTTTAAGTTTGGCTTTGTTAGCCA
AGCAAGCACGACGTCTTCTTGACAACCCCGATTCTGTATGTGCCACGACCTTGAGAGCTA
AAATAAAAGCAAACTTTATACACAACGCTTCAAGAAAACCACATATCATGTGATAAATAA
AAACATAGCTCCAAGTGACATACCAATAGAATGGAGACGAAAGAGGGGATGTCTTCTGGG
GCATCCCCAAGCTTAGATGCTTGGGTCTTTCTTGAATATTA
