| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_1580228
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18349 |
1 |
562 bp |
MLOC_18349.1 |
Available |
Available |
LOC_Os08g29370.2, FRAME:-2, EVALUE:1e-40, 13108.m03034 protein peptidyl-prolyl cis-trans isomerase, chloroplast precursor, putative, expressed |
CDS Structure of MLOC_18349
Contig Sequence (2315 bp)
>contig_1580228 2315 assembly3_WGSMorex_rbca.fasta
CATAATTTCAGTGCCTGCACAGAATTCCCTTCTAAAAACCCGCTTGTCATTTCCTTCTGC
NNNNNNTTGGGTTTGAAACTCTTACTTATCAAAAGGACTAGGATAGATCCCCTACTCTTG
TGGGTCGTCACTCATCCATGTGCTTGACAAGGCATGAAGGTATGATATCAAGGGATTGCC
CAGATCCATCAGCAATTGGCTTGAAAGAGTCGATCGTGAGGCAACGGCCTAGCAAGGGAT
CACCGGCCTCTTACATTTCCCCGTGCCAGGTTTGTTCTTCGATCAACATCGCCCGTACCT
CGCGCACCAACTTATGAAGCAAAATACCATTAGATCCCTCGCTAGGGTTCATGACGAGAT
GAGAAGTGTGGGACAAGGTCTGCACACAGTTTATCGTGGTTTGGGCCTCCTAAGAATAAT
ACATATGTCTTTGTTCTTGTGATTATTCATGGTGAGGGGATACCTCGTGCAGAGAATTAC
ACTCGTGTACGGGATGTCTACCGCGAGTTGGATCTAAGAGTGGATTCTGAATGAAGCCCC
GGACCTCCCTTTATATAGGCAGGAGAGATCTAGGGTTTATGGGGGGCGATGAGATCTATC
CGGTCATTGACCTTTGACTTGGAGAGCACGCACGCCGTCTTTGCCTTCTTAGGGTTTCCT
GGTGTTTCTTGGGCCTGGCGAGCCCCGTGCAAAGTTAAGGCCAGGCTCCCGTGTGTTAGG
TACCCTAGGTACAGAACCGTGTAAGAAGCGCTCTTCTCGTCACACATTTAAATAAGCTCA
TGGGATCCCCGGATTTGGAGCTCGATCTGTTTTCTCCCCTCTTCTTTCTAGGTTGCCATG
GTGATGGAGGGAAAGAAAAGGGATGAAGAGGATCCAACTTTCGACATGCTATCTTAGTTC
GTCCTTGGAGCTTTTCTTCAACAACACCCATGTCCCGATGGTCTTCAAGGATGTGATGTT
GCATCTACAAGTCAAAGGGCGACCACCTCGAATCGAGACGCTTTTCAGTGTTGGCTTAGT
TAATTCCTTCCGATCGTCGTGCCATAAGGGAGGTGGCTTAGTTAATTCCTTCCGATGGTC
GTGCCATAAGGGAGGTGGCTTAGTTAATTCCTTTCGATCGTCGTGCCATAAGGGAGGCAG
TCTATCTGCTTCAACCTAGTAATTTCAGAGTCTACTCTCGATGTGTCATCGACAATGTTG
TAAGCATTCCTCCGCCCAAGTGGTCTCGTCCCCACGGCGATGGGATCGAGCCAGAGTTGA
AGCTTGTGACAAGGATGTGATTGCTTTTTGGTTTCAACTGTTGGGTCTTGTTTGCATAAT
ATTTGGATTGGGTTGTAATTTTACTTTTTTGATGGGTCCCTTTGTAGTATGTGCCTACAT
GCTTACCTAGGAGTAATATAAGTCAATTTAACACAATCCCCAAGAAAATTGCAGAAATCT
CTGCAAAATGCTATTGAGGCCATACAAACGGGATGTCGCATAGTTTATCGAGGAAACTGA
TTACGGTAAATAACTTTGTTCTTTCCATTATCTATCGAATTCCACATAATGCAAAACTAC
TCCCTCCGTTTCTAAATACATGTCTTTTTAAAGGTTCCACTAGAAAACTACATACGGATG
TATGTAGACATAATTTAAAGTGTAGATTCACTCATTTTGCATCATATGTAATCCTTTAGT
GAAATCTCTAAAAAGACTTATATTTAGGATCGGAGGGAGTATATGTAAGCACAAAAAGGA
AAACAAAACAATGGTACAAGGTTAGAAATTCCAGCACAAGACATCGGTTTTAATACCGTA
AAATAATTGCATGTCAAGGAATTCTTATATACGGAAACATGCTACCCTACAATCTTGTAG
CTCGGGTTGACAAGATTGTCTAGGCCTGAGACAACCTGGATTGATTCAATAACGTCCCCC
ACCTTGAGATCAGCCAAGAAATCCTCATTCTCGGTTACGTATCCAAACACCGAATACCGC
CCATCCAATATATTGGAATTACTTGGCGTCAACTCACTTTCTTTCAAGAGCCAGAAGACT
TGACTAGAAGCGGAGTTGTCATCAAATTCCTGTCAAGATATGCAGAAGCCTTGTGTTAGA
ACAAGGGACTTCTTTTATTCTCGGTCCTTGTTTCCACTGCCTCCTAAGAATGCAGATAAA
CTTAAATTTGAATGTAAAAACAGGGTCAAATAAGATGTTCATGCCTATAACAACATAGAG
CAGCCCTTGGCACAGTTGTAACGGGTGTTCAAGTACATGCTCTCCCTCCCTCCCCTCTCT
CTCTCTCTCTCCCTCTCCCTCCCTATCCATCTCCC
