Contig Data
morexGenes
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Map Locations of contig_1580183 (4674 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_1580183

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18338 2 1122 bp AK363404 Not available Available None
MLOC_18337 3 2152 bp MLOC_18337.2 Available Available LOC_Os01g12320.1, FRAME:-1, EVALUE:4e-155, 13101.m01328 protein GDSL-like lipase/acylhydrolase, putative, expressed





CDS Structure of MLOC_18338






CDS Structure of MLOC_18337






Contig Sequence (4674 bp)

>contig_1580183 4674 assembly3_WGSMorex_rbca.fasta
TATTGATTTGTAAAATTAATGACAGATTGGTGCAATTTTACTAAATTCGAATTGTTTTAT
TTTGGGTTGTAAATTTTGAACTTTTGTAAATTAAGAGCGTGGGAAATTTATTTTTTCCGT
TGCAACGCACGGGCCCTTGCCCTTTTGCTAGTATCTCATAAGCCAATGATGGGGCAAGTT
GTTCGCATGTTGGATGGTGTCATGGATATTGAAGTACCTCCTATTCCGAGTTCGCTGCTG
AATTTCGTGGGCATGGAGGATTTCACTCCCTGTACAGATTTATATAGTCTCTGAAGGGTC
AAAAAGCTTCGTTCCATTTGTCCAGATCTACATCAAGAATTATGTTTGTGTCTTTTCTTC
CTAAGCTGCACTTGTCCCTTATTGGCCAAGGTTCTGAACTGCAATTTGTTATCATCATAT
ATAAACTTGTGGAAAATCTGCTTTAAACCAACGCCTTCACCTCTTTCTCTGCTGGCAGAA
AGGATCACCCCTTCATCCTCTGAACAATTAAACTATAAGTTTATTTATCTATCTGAAATT
GAGTGTAAGATGTGCGGTGAATGAATTCTATTTCCTCCGTACGGAATTTGTTGACGCTGA
AACGGATTACCTAGCAGTAGTGGAGTCAGTTCCACAGACTGGTGTTTGCAGAAACCTAAT
TAATCCTTGTGTCTGAAGCAGTATTTTTCATGGTTTACCGCAGCAATACAAATGCTTGCA
GAATACGTACAAGAATGGCAATTTATGTCATTTGCCCTGTGAGAGTTACTTTTTAGTATC
ATCCTAGAGTTTATGTCCCCGTGATGATGTATGGATGTAGATTGTGATGAACATTTTTCT
TAAAGATCCAGCTACGCTGGCGTTAATATTGATAGCAGAAAACAGAGGGAGAACAAAATG
GGATGAAGATCCGAGGATCATTGAACGGTCGAGGGCAAGTTGGTCTTACGTGTGGAAAGA
AAAAAAAAGGAAAAAGGCTCCTAATGAGGACTCATGCGGTCGGTCCTTGAAGGGGCTCTC
AATGCAGCTAGCTCCCGCTAGTCTCCATTGCTCCATAGTAGTTGTGATCCCTGAGATGAT
GTCTCTGATGCTCGGTATCTTATTCTGGAAAGTGCATTTGTTACGTTTTTGTTAGATAGC
CCAACAGGTGAGAAGTCTCATCGTGTTGGTTCCCTTTTTTTTCATTTGCCTTCGGTTTCT
TCCTGTGATTTTAGCGCTATGGTCACGGTAGATTACTGTTTCCAAGTCCTCCTTTGGCTT
GTGGTGAACATTTGAGTAATGGTATGAAAGACCGAACAGTACCAGGACATTTCTGGCTCT
AAAATATATTACTCGATGTAATCTGGAATTCCATATGAGATCCATCCGATCTCAGTAGTT
CCCCAAATAAACTTCGCGTCTCGGTGTTACAATAGGCATAACAAGGTTTTATCCGCTGGT
TTTCTAACTTGTATGGTGTGATTTGCTCAGAATTCAGCGTGACTCTTTCAGATTCTTAAC
TTGGAGCTTCCATGATTCCATTCCATTTCCAGTGCTTATCGCTTCAGAAAGTCCTTGATG
GAGTCAGACAGACCAGACTCCATATAGCCATCAGTCCGTGAACCAGAGCAGCTTCTGCTA
CCTCACTAACTGATGCATCTTCTCTCCTGCAGAGGAGTCTATGCTGCCCAGCCAGCCATC
GGCGATGTAGCGGTAAGCCGCCTCCGTCAAGTGGACGCCGTCCCAGGATAGACGAGCAGC
CGGTTTCTGACATACTTGTGCACCTTCATCGCCGCAGAAAAGTGTCCCAGGCCCTCCGCA
ACAGATGCTAAGAACATCTTCTTCAAACCCTGCAGAATGACAACCATCAACCTTGACCTT
GTGCAAGCTGCCTGCAGACGGCAATAACTCTGAAAGTGCTTACCATACTTGCGAGGTGAC
TCGACCATGTCCATGATAGGAGCAAAGAAGTCGGCGTAAACGATCATGGCATCCGGGTGT
CTGCCCCGGAGCTTCTCCAGGGCCTCCTGCAGCAGCAGGTTGTGGTGCATCCCTAGCTTG
TTGATACCTTCCAGGCAACCGGTGGTGGAGTTGTATTCTGCCGGGTCGTCTTTGCCGTAG
TGGCTGATAATCTGCGGCATGCATCCCGAGGGGGCTGTCCCGGGAACGACGAAACTCGTC
GCCCCGTGCTTGATGAGCCTCTGTCGCCATTGCCATAGCTAGATCAATACCATTTTAAAC
TGTCTCTGTTTAAAAGCTGAAATACAGGTCGACGAAGTAGGTTACCTCGATGGCCATGGA
GATGGTCCCGATCACATCTGGAACGAAGGACGTGATCTCATGCAGGCTCTTGGTGGGTAA
AGAGAAGTGGTAGTCGTTGACCCCGAATTCGCCCACCAAGAAGAGGGACCTGCTGAAGAA
TGCCTCGCACTCTGCCGCGGAAATGAAATGTTTCAGTTTCATGTCACTCTGCAGGCGGCG
CGGCTAGCTGAATAAACATTACCTTGGGTGTTGCGGCAAAGAGAAGGCTTGAGTGACTCG
AACCACTGCAGCTGGACGCCCAAGCTGGTGTTGAGAGGGAACTTGCTGCCGGGACCGGAC
CCGTCGTGGAAGAAAGCGGCGTCGAGAGCGGTGGAGCCCCCGACGGCGAAGTTAGCACCC
CGGCGGAAGTTCCCGTTGTGCGCCAGCGACGGCGGGACGAGCGGCAGGCCCAGGCGTTGA
GCTGCAAGCAGAGCGGGCCAGCTGAGTTGACCGCCTCAGATCAGATCAGTAGGGTTTGTT
GAGGTAGTACCGATGAAGTCGATGATGAGGCGGCCGTCGGAGTTGCGGCCGGTGGGGCGG
CCAAAGAAGGTGGAGCCGTACGGCGGGCGCGTGACAGGGTTGAAGATGGAGTTGGCGGCG
AAGACGACGGGGTTGTTGCCCGTGTCGGCGAAGGAGTCGCCGAAGCTGAAGATGGAGTCG
TACCGCCGGACAGCGAGGCCCACGGAGGAAGAAGAAGGGATCAGTGCCCATGTCCATCCC
AGCTTCGCGACCAAGAGGAACAGCAAGACGGCGCACGGCAGCTTGCACATCTCGGTGGCC
ATGGCAGTTGCACAACGGCCTGCCCTGGTAGAACAATTATTGTACCACCGGAGAAGTTGT
TGCCGACAAGTTCATGTACCATCAGTCCATTTAAGTCTCGAGAGCCACTAATAGAACAAT
TAATTTAAGTCTCGAGAGCCACTAATAGAACAATCATTTGGAAGTCACTGTTCCATTGCT
CAGATGAGAAGTACTCCCTCCGTCTCAAAATAAGGGTCTATAGTTTTAGTTCATATTTGA
ACTGGTAGTCCAAATTTAAAAGTGTCGTAGTTTTATTTCAATTCTAAACTGGTAGTTCGA
ATTTGAAATAAAACCGTGAAATTACTTTTGGACGGAGGGGTAAATTTCCACCAATGTTTA
CAGTTCAGACATAGGTTCAATTGCTTGCAGATAAGCAGTGAGCAGAGGTACTTTTCGCAT
AATAAACAAACAATTTCAGTAGTTCCACATGGCAAGGTGTTACAATTTCGTAACATGTAG
TAAATCATAAGACAAAAGAATCATACACCGTCGTCAAAACACAGAACTATCCGTGCTCCT
ACCCTTGCAAAGACGAAAAAATGATAGCAGTACTAAAACGAACTCCGTCAGGGGGCTGCA
GATGAGCTCTCTGCCTTGCTCCGAGCTTCCCCCACCGGCGTCGAGGCCTCCGTCGAAGCC
CGCGTTCCACTGTCATTCCTGCCGACCTCTTCGATCATCTTCACCATGTCCACCATCTTC
GGCCGCCGCTCCGGGTTCCTCGAAACGCATGCCATTGCGATCTGTAGCATCTCCACCATC
TCCTCCTCGATGTTAGGGTACCTCATCAGCTCACCGTCAAATACCTCGGCGGTCCACTCC
TCCCGGACAACGGACTGCACCCACCTGACAAGGTGGACGACCTCGTTGCCTCCGCCGGTT
ACCTGAACGGGTGACTTGCCGGTAAGGAGTTCGAGTACAAAGACACCGAAGCTGTAGACA
TCAGAGGACTGCGTCGATTTCCTCGTGTCGGTGACCTCGGGTGCGCAGTATCCCAGAGAA
CGGGACCTCGCGGTTATCGGGTTCATCAGTGGCGCCAAGCCAAGGTCCGCGATGCAGCCA
TATTGCTGGCTGTTGAGGAAGACATTTGACGCCTTAATGTTGCCATGGACAAATCTCCCA
TTGTTCTCGGTGTGAATGTGTGAGACCCCTCTAGCTGCGCCCAGGGCTATCCTTACTCTA
GTCTCCCAATCCAATGGTGTTCTGTCCAGACCCCTCTTCCCTGCAAAGAGAAAAAACAAT
GGCAGAATTAGGAGAAGAATGCCATATTCAAGTTTGGATATCAATAAAATGCAAACGGCT
GATATTGTAAAGTCATCTCATGTCAAATTATCAGCATTGCTGACACGAGGCCAATTTCTG
GATGACATAAAATAATGCTTGTTGCCACTTGCCAGTGAGGCTAGCAAACCTAAATATTTA
TAACCCAGATGTTTATAGGCTGAGAGCAAGTACAATAATAGAGCCGGCTGTACGCTTATG
CCATGTCACCTATAGCCCATCTTATAGCTAACATGTACAATAGTTGGTTAGAAGAGTGTA
CTACTTATTTATTATATGACCCACTTTTCATTCTCACAAAGTGTCTAGGAGCAC