Contig Data
morexGenes
Links



Map Locations of contig_1580129 (2677 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1580129

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18325 1 1446 bp MLOC_18325.1 Available Available LOC_Os07g26690.1, FRAME:+1, EVALUE:4e-148, 13107.m02646 protein aquaporin protein, putative, expressed





CDS Structure of MLOC_18325






Contig Sequence (2677 bp)

>contig_1580129 2677 assembly3_WGSMorex_rbca.fasta
ATATATATATATATATATATCTCAACATCCCAAAAATTCCATAGAGAGTAAGCACATGTT
TATAAGAGGCTTTTGCCCTAAATCATTAATTATAGTATCCATAGATACACAAATGCGAGA
CTAATAAACCCAACAAATTTTCTCTTGTCATGTCGGTTTGTCCCTCAACCACGACCGGTT
GTTAAACTATTAATTAATTAGTTGGCCGAGAGTAATTTGTATCCAGAAATTCGGACTCTC
TTTCAAAAAAAAAAAAAAAAATCGGACTCGGACACCACTTGGTTGTTAAGCTAGCTAGTG
GAATCCATTGGGATGTCATCAAATGGGACAATTAAATCAGCTTAGTATTCTCCTGAACAA
AAATGGAGCCTGAATCTCTGGCTTTACCCGGCCGTAAGATCAAGCTCACACTAGCTAGGA
AAAAAAAAACTGGTTGGTTGGTCACTTGAGATGGTGTTCATACCTAATTACACCGACAAA
AAGCATATGCATAGCCATAGCATACCTGCCTGTAAGTATATATACATGCATCTAAGCCTG
TGAACGAACATCGATCAAGCAGCATCATCATATCGCCATCTCCATCGATCGACATGGTGC
CCAACAACAACACCGTCGACAAGGACTACCGTGACCCTCGCCCGGCGCCGCTCATCAACG
CCGGCGAGCTGGGCAAGTGGTCACTCTGGCGCGCCGTCATCGCCGAGTTCACCGCCACGC
TCCTCTTCGTCTACGTCACCGTCGCCACCGTCATCGGCCACAAGCGCCAGACGGACGGCA
CCGTCGGCTGCGGCGGCGCGGGCATCCTCGGCATCGCGTGGGCCTTCGGCGGCATGATCT
TCGTCCTCGTCTACTGCACCGCCGGCGTCTCCGGCGGCCACATCAACCCCGCCGTCACCT
TCGGCCTCCTGCTGGCCCGCAAGGTGTCCCTCGTCCGCGCGCTGCTCTACATGGTCGCCC
AGTGCCTCGGCGCCATGTGCGGCGCCGGCCTCGTCAGGGCCGTGCACGGCGCCCAGTACG
CGCGCCACGGTGGGGGCGCCAACGAGCTCGCCCCGGGATACTCCAAGGTCGCCGGGCTCG
TCGCCGAGATCGTGGGCACCTTCGTGCTCGTCTACACCGTGTTCGCCGCCACCGACCCCA
AGCGCAAGGCGAGGGACTCCCACGTGCCCGTGCTGGCGCCGCTGCCCATCGGGTTCGCGG
TGCTCATGGTTCACCTGGCCACCATCCCCATCACCGGCACCGGGATCAACCCGGCCAGGA
GCCTCGGGGCCGCGGTGGTGTACAACAAGAAGAAGGCGTGGGACGAGCAGTGGATCTTCT
GGGTGGGGCCCTTCATCGGGGCCGGCATCGCCATGGTGTACCACCAGTACATCATCAGGG
GCGGGGCAGGCAAGGCATTAGCCTCCTTCCGCCACAACTACATCGATACCGCCTAGCTAA
TATATATATACTCCATATAACTGGTGGAGTAATATATAAGAGATACTAATTTATTTCCAC
CATTCATTCGTCTTGATTGAAAATTCATTCTCTGTGTTTTGTTTTTGTTTCAATAAAAAC
AAATATATAGGTGCACTATATATTCACCTTCTTCTGTGTGTTTTGTTTTTGTTTCAATAA
TAATAAATCGTACGTTCTCTAGCTAGTTTTTGTCATGCACGTTTGGTGTTGTAGTTTTTT
TCTTTTTCTTTGCAGGATTTAATTTGGTGTTGAAACATAATTACATTACAAAGTTGATTG
CGATGTACTCCTATGCTGTTTGTGTTGTATCGTGTCGTGGGTCAGTCATATTCCTTGTAA
ATGTGTGTGAATTAATTGCTGTTAGTTCATTGCCAGTCGGTCCTCGTCTTCTCTTGAACA
CCATATCCTTTTTTTCCGTATCTTTTGTTCATTTTCTTTTAAATTTAAATGATACAAAAA
AGGCAAGCTCGAGGAGCACATTGCAAGTTTTTTTAGTTTCACAACTGTAAAGATGTCAGG
AAGGCAGAATTGCAAGGTTCTCAAGGGGGAACGGCAACCGCAAATTTTCAAAGATAGGTC
TAGCTGAGTTTCATTTCAACAAAACCGTTTTGAATAAGTGACACCGTCTTTTCAACGTAA
GTAATTTTTTACGAACATGCATGTGAAAAATTCATTTTATGCACTATAAATGTTTGTTTT
CCTGTTTACCATTTTAAAATAATTTGTTGGATTTAAAAAGATGTGTGGTACAAAATTTCT
TTTAGCTTGACCTTTTGTTTCCCTGTGGTGTGGTGGTGGTTGCAAAGTTGTGATGTACGT
TACGTTGTGTTGTGTCGAGATGCATGCTATACCTCACCGGTTGCCAGTAACACGGGCATG
CAACCGCCGGTCAAAGCTGTGAGAAGGAGGAGCCATCGTCATACTCATACATGCCGCGCG
CATTACAAAGGCTAGTCGAGATCCAGAGAGTCGGCAATTTATTGATTAAGTAATTAATAA
AGTCATACAAGGTCTTCCGGATACAATCCGAAACACACACAACCAAACTAGGAGTAGTAG
AATGCTTAATTATCAGACAATGGGCAACTAGATTAATTAATTAGAATGCTTCAAGGTTGA
ACAAGTAAAATGCATGTCTGCTTATATATATATATATATATATATATTAAAAATTAATCT
AAACTATATTAAGTTACAAATTCAGGTTTTAATGTTG