morexGenes - Barley RNA-seq Database

Contig contig_1580109

Source Contig contig_1580109

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1580109 (876 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_1580109

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_18320	1	804 bp	AK361731	Available	Available	None

CDS Structure of MLOC_18320

Contig Sequence (876 bp)

>contig_1580109 876 assembly3_WGSMorex_rbca.fasta
CCCCCCGCGCCGCCGCGCAGGTACGAGCACGAGGCCGTCGGTTTCCTGTAATCGCGCGCT
AATACGGCGCAGATAATTGAACGGGCAGCGAGACATGACGGCGACGCCTTCTTTGATCGG
GCTGAGCGCAGGCAACCGCCTTCTGAGCACGTCCTTCGGGCCGCCCAATGACCTGCTCTC
CGACAAGGTCAACAGCCACATGACCAGCGCGGCGGGAGACGCCCACGGCTCCTCCTCGCT
GCAGTTCGCGCCACCGGCCGCATCGAAGCTCACCGTCGCCGCGCACAGGCTCAAGCTCTC
CCCACATGGCCGCGCGCAGGTCATGCGTGCCCTCAGGCAGAGCGCGCTCGCGCCGCAGCC
TCCACCACTGTTGCTCGCCGACGAGTTCTCTCTCGATGCCATTATCCTGCTGCAGAGGTC
CATGCTCGAGAAGCAGTGGAAGCTCCCCTTCGAGGACGACGACGGCGGCGGCGATGGCCA
CCATGGGGATGACATTGATTCGGCCGAGGACGATGACGACAAGAGCAGGAGCAGCTCCGT
CGTCGTGGCGCGCTCCGGCGTCTCGGCGAGGCAGCGGCGGATGAGCGGCCGGAGGCGCGG
GAGGTCCAAGAAAGGCAGCGGCGCCGTGCACCTGAGCATCAGCCCCGAGCTGCTGCAGAG
CAGAAACCGCATATACCTCCGCGGCACCGTCAGCAAGGAGCTCCTCACGCACAAGCAGGT
TGTCCACCTCTCCAAGAAGATCAAGGACGGGATATGGCTGCAGCAGCAAAGATCAAAGTA
CGCGATAAGCCAGCCACCACCCCCCCCCCCCCCCGCTAAATTTCGCACAAATAAGTTCAT
ACCAAGCTATAAACTCGGCACGCCGTCTGTTGTGTG