morexGenes - Barley RNA-seq Database

Contig contig_1580065

Source Contig contig_1580065

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1580065 (2069 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1580065

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_18306	1	1162 bp	AK360626	Available	Available	None

CDS Structure of MLOC_18306

Contig Sequence (2069 bp)

>contig_1580065 2069 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGTGAATGATGGCGGGAGTTTTGGCGCGTCGGTCACCCTGGCT
ATATAGGGCGATCGTGAATTAGTGGGCGGTGACGCGAATTCGTCCCGCCGCTTTTTCGGA
GACGTGCCATCGCTCCCGGCATCTCTCTTCTCGCAGTTGCGCAGTGCCACCTTCCCCTCC
CCTGCATTGCCCTAGTCCGGCTCACTGGAAACTGTCGACTGAGTCGTTCCTAGCGGGTTT
GGCTGGGCGCTGCTTTAAGGTTCATGCGGGCCGAGAATTGTATGAGGGCCAGACACCCAA
ACGGGTCATTTTCTTCCCCCACGGGCCTGGTTGAGGCTCATCCTTGACTGTAGCTGTGGA
ACTTCGACCTCGTCTCCGATGTGCAGTCTTTTTCCCTCGTTGCTTGTGTTTACATGTATA
CTCCCTTTATTCTTAAATATAAGCCTTCTTAGAGGTTACATTAAGGTACTACATACAGAT
GTATATAAACATATTTTAGAATGTAAATTCACTCATTTTGCTTCCTATATCCCTTAGTAA
AATCTCTAAAAAGACTTATATTTATTATTTTAAAACGAAGGGAGTCAAGGGAGTACATGT
CAACCAAACCAACTTCCCTTTGCCTGTCTGCCTCTCCAGCAAGCCACGGCAAGTCTTTCG
CCGCTAACATCTTCTGATACTGATGTGATACATCTTCTGATATATCGGAGACCGTGTTTA
ATCTGCTGATATTGCACTTTTGTCAATAGTCAACAACTCACCACGTCCTTACACCATACT
ACGCCCACACAAGCTTCAAAGATACGAAAAGGGATAGAGTACCGGCGTTCAACTGGAACA
TGAACCACGAAAAAAGGGAAGAAAAAAGAGAGAAAAAGACAGCGTATAGGATTCTAGGTT
CTTGACAAAACGGTGAGGATGGCTTGTGAACTGAGACAGTGGCAGAAAACATGGAAGCGC
GCGGTCATGCATGCTGCCTTAAAAAATTAAAATGACTCGAGAACAGAAGCCCCCCTATGG
AGGAAAGAACGCATCAGGTATGCACATAAAATCTAATGTGAAAACCCACGATAGTGGTAT
CTTTGAATACTCCTGCCTACACTCCGAAGTATACACACCGACCCCGGCCCCTGTTTATTC
AACGGTAATGAAAATCTGAATCTTTCAACGGTATGTACGCCACCAATCTCACGAAAAATA
TATAAGTAATGTAACGAGAACGAAAGCAAAGTCTGCAACAGATTTCAACGGTGCGTTTTC
CGTGCGCACGCATGCGCATGAGCTGCTTCTTCCTCGAAGATCACATGGCGGGAACTGCGA
CGAGTCCGCGGCATCTCATTTTCAATCCTCGTCGCGCATTGATTCCTGATCGACCCGCTA
ATTAATGTGGTATGTGCCGCGCGTTGACGTTTGGCGCTTCGATGTGACCATCCAATCAAA
AGTGGACGGCGCACCGAGACGACGACCCGTCGGGCGCTTTCAGACTCGCCGGATGATCGC
CTTCTCCTCCTCCGGCTCCTCCTCGCTGTCGCCGGCGACCCTGCCGCCGAGGCAGTCGAA
GCGCACGCTCCCCTTGCTGTTGGCCGAGCCCACGACGGACCCGTCCGGCGTCTTCTCACG
GACGGTTCTTGGCAGCGGCGGCGCCGTCGGCGCGGGTGTCGGAGGGCATTGGGCTGGCGC
GTCCGCGTCCGGCGCCCTCCTCGAGGCCGCCCAGAACGGCACCCCGGAGGAGAACGTCCT
GGCGATGAACGACGGCCACCGGTCGGACCGGCCGATCCGCGCGCTGCGTGCGCCGGCGTC
CCGCGCCACCGTGCGGCGCAGGCTCTCCTCGCCCGCGGCCACCATGTCCCTGCGCACGTG
CTCCGGGAGGCGCAGCGTGAACCGCTCCAGGTCGCCGTCGAACCGCGCGGAGAGGGAGTG
GCCCGTCGAGTGCGCGCGCGAGAACGGCCGCCCCGACCGCGACCGCGACCGCACCGCGCG
CCGCATGCTGCCGATCCGCTCCAGCTCCGCTGCTTCCCTCATTCTCTCCTCCTGCTCCTC
GCCGTCGCCCTCGCGGTTCATGTCGATGG