Contig Data
morexGenes
Links



Map Locations of contig_1580055 (4225 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1580055

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18304 1 3106 bp AK361898 Available Available None





CDS Structure of MLOC_18304






Contig Sequence (4225 bp)

>contig_1580055 4225 assembly3_WGSMorex_rbca.fasta
AGATGACTAAACACCTATCCTATTAACATGACGCCATCCAAACCTGTTGAAGATACCCTG
TGCTACCATCTACCATCGGACACACCCAGTAACCGTAGGCTCCCTGGCGTCCACAGGAGT
GAGTGATCACCAAGTAGAATTCCCTAAAATAAACTAGCAAGCAGAATCCACTCAACTCTT
CTTGTTCTTTATGCTGCTACAAATGACAATTCCCGGGGTTGCCTTGATCCATTCTCTGTA
TAGGAACAATGTATTATATTTAGATGCTTATTTGTTAATGTATAAAATAGGTATGTATTT
GTCTAAACAGCAAATTGTAAAACCATGCGCGAGGCAGGGTAAATGATTATCTACGGTTCT
AATATGTGGGGTGATCATTTGTTAATCGTTTACATTTGTTTGGAAACAGTGCTCACAGTG
AGTATTATAAGTTTCGTTTTTAAAATGAAGATGTTCACAATCAACTGAACGATCAAGTTG
AACAGTATCAATGTAGCATTCAATTGCTTTCCTTCAAAGCTCCAATTTGGAAGAACGGGG
GGACCTTACACCATGGAGGAAATGCATCCTTTTTTGTCCAGTCCCCTTAGTTTCTGTTGC
TTCTTTGAGCGTGACTTAATAGCTGCCCTCTTCCCTCTCCCTTGATTGATACCTCCTGTA
TAGAATTTATCTCATACCTACTCTGTCTTGCAATGACTATGTTTATACTCATTTCACTAT
CTGTTGGACCGTGTGGTCCTGGTGGACATGCATTTCTCTTATATGTGTCATAATTTCGAA
GTTTCTTTTTCATTAGAACTCTGTAAACAAATATAAGACGCTTTATATCAGTGATCTAAA
CGTCTTATATTTGTTTACGGAGAGAGTACTGTTTTGCAAAGGTTTGGGGAAACATGCACA
TTTCCAGCTTTTGATATACTTTTCTCTTCGCAATTTCCATTGACGAACTACTTTTTGGCA
TGAAGAAACCCATTGATTTTTGATTTTTAAATACAACCTTGTAATTTTACCTAGTAATAG
ATAGTTAACCTGATCTGTTCTCCTTCCTAGTTCCATCCCTCCATCATATAACACTCTACT
TGGAGCATTGATTTTGATGAAACAGCTCTATGTTGGTACATGTACTGTCACTGATAAATT
TCATGCAGCACTCTTTTAAGTTGTAACTCTAATGTCTGCTACCTGCTTGATGATGTAGTA
AGCCAGACTATGTGATAACACTTCATCTGACCTACTGATAATGACTTCATCTGAACTACT
GATAAGCTCCATGTCCTCAGTTCCATATTCGATCTCATTCTTCCAGCAATGCCTTCTTGA
TGTTAACCCACCATTTGCACATATCATTATCGCATCTTGATTTCCCGTGTTATTTTGTCA
GGTATGTTGCGGTTGGTAATGAGCCTTTCCTGTCGACATACAATGGAAGCTTTCTGCAAA
CTACTTTTCCTGCCCTCAAAAACATACAAAGTGCACTTGTGAGGGCTGGGTTGAGCAGTC
AAATCAAAGTAACTGTTCCTCAGAATGCTGATGTCTACGATACATCAACTGGCAAGCCTT
CTGACGGGGATTTTCGCACAGATATTCACGATAAGATACTCGAAATTGTGAAGTTTCTGA
GTGATAATAGCGGTGTTTTTACTGTCAACATCTACCCTTTCATAAGCCTCTACATTGATC
CAAACTTCCCCGCCGAGTATGCTTTCTTTGACGGGCGCTCACAGCCCGTTGTTGATGGCT
CTGCAACATATACAAACATGTTTGATGCAAACCACGACACACTCATCTGGGCTCTGAAGA
AGAATGGATATGGGAATCTGCCGATCGTTATTGGGGAGATAGGCTGGCCAACTGATGGTG
ACATGAACGCAAATGCTCAGCTCGCCCAGCGCTTCAACCAAGGCTTCATGACACACATCG
CCACTGGGCGAGGGACACCGATGAGGCCTGGACCGATTGACGCTTACTTATTCAGTCTGA
TCGATGAAGATGACAAGAGCATACAGCCAGGGAATTTCGAGCGCCACTGGGGGATCTTCA
CATACGATGGCATCCCAAAGTATCAACTGAACTTCGGTGTGCCAAATTCAGAGATCAAAA
GAGCAAGCGGCGTGAAGTACCTTGACAAGAAATGGTGTGTGCTGAAGCCTACTGTCAGCC
TCGACGACCCAAAGCTTCCAGACACGGTGAGCTACGCGTGCTCCAGGGCAGACTGCACCA
GCCTTGGCTACAGGACTTCTTGCGGGATGCTGGACATCCGGAGCAACATCTCGTACGCCT
ACAACAGCTTCTACCAGAAGAACGATCAAGACGACGTGGCCTGTGGCTTCTCAGGCTATG
CAACGACCACCGGCCAAGACCCCAGCACCGGGACATGCAGGTTCGGGATCATGATCGAGG
TCGACTCGGCCTACTCGTGGAAGCCGCGGCTGGTCCGGAGCAACTACCTCCTGGTGCTTC
TCCTTGCACTTGTTCACCTGTGTGTGTCATCCTCATAGGTGCTTTTTTTTCTGCCAAAGA
TGGCTCGGCCATGAGAGCATCAACAGCCTGGCAGCTTAGAGGGATATTTGAATGCCTGCT
GTCAGTGCGTTCATCCATGTAGGAACCTTTTTCGACCTTTTTCTATTTCTTCTTCTAATT
TCGGTGGATTCGGACGTCGCAGCCGCATGGTTGAATTCTCCTTTTTAGCGTAGCTTTGAT
CTTCCGGTACCATTGTGATTGGGATGGTGATGAACTGGACCATTTATACCCAGGAATGTG
AGTGAGGGTATAGCTATCAAACCTGCAAATGTGGTGAGTCCAGACCAGTCTTTCTCTTCC
GTTTCATTCATGACGGTCTCTAACTCAGAGCTGTGTTACAGACAGTCTTTTTTTTCCTTT
CTTTTGCAAGCCAAGCAAAGCATTTCTGAATGCATTTTCACACTGATGGAACACATTGGT
AACCATGCAAGTCATAGCCATACCCTAGCAGTAGGATTCACTGGAGTGGTGGGAAAACTT
GTGACCAATTGCCTGTGCACATCTGCACTTGGGAGCAGTCATTTCATTTCAGATCATGGA
TCTAGTGCCAGACAACCGTCTGCTTGAATCCATGTTGCAGTTATGGTTTTTGTTTTCAGT
GGTTGCTATCAGTGTCAAGCTGCCAGCTATGTCGGCATCATCATCGTCGACCCCATCATC
GTCTTCTTAAATTTTGTGGCTCTGGACTGAAATAAAGAGGCAATGTGGATGGTCTATCTT
CCAAGAATTGACAACCTTGTTTTCCTCGCCATCTGTATAACAGTACAACAACTCAACAAG
TAGCCAGCATGATAAACATGCACTTGGACTACATATGAAACCAAAAATTGACCCGAAACT
TGTTGTGTCAAACTCATCCAAGCACCACATAGCTTCATAAACTTTTGGTTTTTATATCAA
ACAAAAATAAAAACAGAGGTGCTTTTTTGAAAAGCCATGAGGCCAGTTAATCACACAGTA
GCCTTTATGTACAATCGCCACTGAGTGGCACCAATAATTGATTTGCTGGCATGAGCTAGA
AACAAGAATGAGTCCTTGGAACTTGTTTGAAACATCCACATAAAAAAGGTGTGATGGCAA
GCAAAGGAAGCCACAGCACCTAAGAACACACACCAACAAGACCTAAAGGCAGGCATCCAC
ACCTCTTAATCCAACCAAAAGTACACAAGTGGAGTAGCACATAGACAGCACAAACAGAGA
AGAGATAAAGATAACCATATGAATGTATCCACTGAGTCCATGAGCTCTGGCCGAGGTGCA
GCTGGTGTCACTCATGCTTGCCACTCCTTTCCCCTCCTCCTTATCCTTCCCAATGTGGCA
ACCCATTTTCCATCTACCTTATCCTTCCCAATGCGGCAACATGGGTTGTTCAGATCAACA
AAAAAATAGAGCATTATTTTGACGCGTCATTATAGCGTATCAGCAAGGGCCACGTTACGT
TTTAGCTAATTGACTCACTACCCACTATAGCACGCTATTTCAGCGCTAAACGAAATAACT
GTTTAGGAATGAATCAATCTGCTCTGTTTATTGATCTGAAGTATTTATACAAGGATTTGA
GACGCGAGTAAAAAGGCGTCTCTACAAAAGGCATCCGTACGGACGGATGCGTCCGTACGA
CGCTTAGACTAATAACGGACTAATCACGTTCTAATGACGGTTCGTTAATTTAGTCGGTTC
GTAACACTCCCCCTTGTACAACGTC