| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
 |
Predicted Genes from contig_1579958
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18277 |
2 |
2006 bp |
MLOC_18277.1 |
Available |
Available |
LOC_Os06g31100.1, FRAME:-1, EVALUE:1e-13, 13106.m03219 protein E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed |
CDS Structure of MLOC_18277
Contig Sequence (3067 bp)
>contig_1579958 3067 assembly3_WGSMorex_rbca.fasta
AAAGGGTTTTCCTTCTTAATTCTTGCCTGATTAGATTGATACATCTCCTCTCCATATATA
GAGAGGTTTACTTGACTCCCAAGTAAGGCTTACTTGACCCCTAAGCAAACCATAAGACTA
ACGGGCCCAGGCCCATCACGTACTCTAACAGTCTAGACTACGCATTCAGAGTGAAGTTGA
ATGCAGAGTGAAGTTGAATGCGGGCAAAATATATTGGGTACTCAGAACTTTCCAAGGGGA
GCTAATAGAATATTAAGGGAGTGGCTACAGGTAAGTCGACTGAATTTTGAATTAGGGTCA
GTCAATTTGTTTTGGGCGTCGGATGCAGATGCAACGGCGCGTCGCCCTTCTTCTTCCTAG
GGGAGCTAATAGAATATTAAATACATACTCTGTTCGCGTTTATTAGGCCCGATAACCAGC
AAGCCACGTCCAGTCTTACTAGGCCCTCTGTAATTAAGTAGTGCAGATTTCGCAGATTCT
GTTGCTCGTTCCGTCCGCTGATTGAGGGAGATAAATTCCCAGCCGCTACATGTGGGAGGC
AAAACGGATTCGCTAATTAATAATGCCAACCCACGTGTTCTAATAGGGCTGATTCAAAAC
TGTGCAAGCACACGCGTTGTGCCTTGGTCACAGCACTTCGACCCGGCCTATTAAGCACAG
ACGGAGGGAGTATAGATAGTTAAGAGTAAGAACTTTTAACTTCATTAATACTGTTCCACC
CTCCTCTTAATATACCCTTTTTCATGCTTACTTTTCTCAAATATAGAAACTTAGAATCAT
TTTGTAACGCGCAAAACTCTCGTTAGCCCATTAAAACGAGCGCATGGCCAGTTAAACGAA
ACATTAGACAACATTTGGCCGTGCTATTAATCAGGAAATAACCAAACTAACTTCTGTCCA
TAATTTATAATTTTATATATAGAACTTATTGCATCTACTGGGCTTGAGTCTGGTTCGGTT
CCGGTGCACAATGCTCTTCGTAAATTCAGGATCATACTAGGAGCAATGTCACAGAGTTTT
ATACTGCAGAACTGAGAATCGAATAAGATCCTGAAAATAGAGTCCAGGATAAATCCCCTA
AATTGCGCCCACCCACCAGTGCCATCTCCAGAACACCACGTTGCTCAGAAGATCATATTG
TGGCTAAATTTCCGTGTGGTAACAACTGAGATACCTAAATCATAACTTCACTTGGATCAA
AAGGAAAAGCTGCCTCGCCCTCTTTCTCCCACCTTATACCAAACGTAAGGCTTTTGATAG
TACCTATATAAATCACCAACAGGCAATCAAAACAAATCGGCAGGAAAAGCAGGTACTGGC
ACCATTTCCCAATCCCCCACCCACCCGCTGTCAAATCAGTACGAATCCAAATTCAAACCT
ACCCACGCCCGAATCGCCCCGCACCGAAATGATAGCGAGACGTAGGCCCAACCTTCCCCA
CCTTTCTCGCGGCGGAGATCCTCCCTGCGGCGCTTGCGGTGGCGCGCCCAGTCGGCGATG
GACGAGCACCCCTCGCCGGCGGCGCCCTTGGCCCCCGGCGCGTCGTCCCCGGCGACGATC
TCGATCCGCAGGACCCGGTCGGAGAAGTTGACCGAGTTGAAGGCGAACTCGAAGCTCGGG
CCACCGCTCGCCCGCGAGAAGTCCGGGTCCATCCCGACCACCACGGCACCCTTCCTCCTC
CAATACCAATCGCAATCCCAATCCCAGTCCCGGTCACACCACGCGCGCCGCCTCACCTCC
GCCGCCGCGCGGCCCCGGCAGAGGGCATCCTCGCCGCCGTCGGAGCCGGAACCCTAGCCG
GAAAGAAGGTTCGAGAAGGCCGCGGAAGCGGGGGCGTGGGGGCAAGAGTGAGACGGGGAA
GAGAGGCGTGGTTGTGTTGTGTGATTGGGGAGGAAAGGCCGAGGGCGGTGAGTGTGAAAC
GGGTGCAGCGGATTTGGGTGCGGAGACCGGCAGACCGCTTAACTAGGAGGCGTGCGCCGT
GGGTCCCGGCTGTCCGTGGGCCACGTTTCTCACGCCCGGGGCCGGCGTGTCAGAGGAGGG
TGAGGGTCGGCGTCGGCGTCGCGATTCTGTGCCTTGCTTCGCTCGCGAGCTGCGGCGTGA
CCTGCGTTGCGTCCTTCCTTTCCTTTCCTTTCGGGGGTGAGTAGAGTTTTTATTTTTTTC
AGGGGTGGAGCAAGTAGAGTTGAGTTGGTTGCGGTTAGGAAGGACGCACGGGGCAGGTTT
ACGGAGAGGACGTTGAGGCTTGCCATTCGGAGGGGGTGGGTTTTGGTGTCACGGGGTTTC
CCCATGTGAGTAATCATCCATCGTTTTCTCGTGTGCTTTCCTTGCATGGAGATGGTCTGG
GCAACTAGGGTTCTTGCGGTGTGGTTGGAGAATCAGAGCATCGGATAGGATTTCGGGTTG
TTAGAGCATCTCCAACAGCCGCCTAAGGCGCGGCGTTAAAAATCAGTTTGCAGCGCGCCG
AGAGCCTGCTTTAGCACGGCAGGGGGTTGGCTCCAACGGCCGCGGTAATTTAGCGCGCGC
ATAGTTCCAGCAGATACGCTAAAATGCATAGATATACATAGATATTTCTCACGATACATA
GATAGATAGATTAAACGATACATATATATATTTCACAATCATAGATAAAAATGATACATA
AAACTATTGTGTAACTACATAAAAAACTACGATGCAACTAGATAAAAACAACGGTGCAAC
TACTAGAACCTACTCCGAGTCGTCTTCATCATCATCATCATCCTCGGTGTCCGAGGTATC
GAGCCAAATGTCATCCCAACGTTCATCGTCAATCCCGAAGAATGACTTCCCACCGGCGTT
GACGAGATCGCACTGCAATATGGCAAGTGCCTTGCGCCAACGCCTGTCCTCCCGCTCCGC
GCGGCAATTTGCCGTCCTCTCCATCCAGAAAGCGTTCTTGGCGGCGACATCCTCCGGGTA
GCGCCAGCGCCACTCCACCATGGCTCGCTCGTCCTCCTCGGCGATGAGGAGGCGGCGCTG
CCGCCCACGGTGGGCCTCACGGGCCTGGCTTGTTATCAGACGAGGCGGAGGGGCGACGGC
TTGGGCC
