Contig Data
morexGenes
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Map Locations of contig_1579793 (5837 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1579793

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18233 1 1651 bp MLOC_18233.1 Available Available LOC_Os08g03290.1, FRAME:-2, EVALUE:0.0, 13108.m00277 protein glyceraldehyde-3-phosphate dehydrogenase, putative, expressed





CDS Structure of MLOC_18233






Contig Sequence (5837 bp)

>contig_1579793 5837 assembly3_WGSMorex_rbca.fasta
TGAGGATAGGGTCGCATCTTGGACATGACACCGCTTGTCCTCCTTTTTGGAGTTCGTCTT
TCCCCGTGGCCGTGGCTTCTCACCCTCCCCAACCTCCTCATTGGCTTCCTTACCCCCTGC
CCTGTGAGGGCGGCATATTGGAGCTTAAAATTTTCCTCATCTTTGATGATCCTCCAATGA
GAAAGGTTGAAGGACTTGTCTTCATATTGGACCTTGAATGCCTCTAAAACTTGAAATGCC
TACAAATAAATTACACGACGCAAGCAAATTAGCAAATGAACATGCATACCATGTATTGTA
TGTCAATGCCGCTCACATGTCTTGTATGTCGATGCCGCTCACGGAGTGTGCCTTGATGCT
CTCATAAATGGCACAAAACATGTTGCATTCTTGTTGTATCACCTTCCATCGCTTCCAAAT
AGACACCCACACACGCGTGTTCTGCATTTGATACGGCGAGAAATTCTTGCGTTCGTGAAA
CTCACGATGGACACGATCCAAAAGGTTGATGCCTTCTGATCGACGCCGACCTTGGGGTCT
TGCCCAATGTCTCTCCAAAACTCACAAAGGAGCTTGTCATCGGCCGTCGTGTATGCCTTC
GTTCGTCTCTTTCGCTTGGGCTGCACCTCGACGACTTGCGTGGCGAGCTCATCCTCGAAC
ATAGCCTCTTCGTTGATGTCCACCTCATCCTCTTCCTCGAGGTCGTAGTCATCCGAAAAC
ACGTGGTTGAGCGGGAAGCCGTCCCGTTCCATCTTGCATGAAGGCGGGCTCCATGCCAGC
TTGGTCATAGGTCGACGACGTGAACGATCCACCTCGGTCGTCCTGGCTTTGGGTCTCACC
GAGATCTTAGCCATCACCATCTGCGACTGCCGGAGCACCATCGAAGATGATGCTCTGTAT
GAAGTGGTTGGCCCTCTCATCATCGATGGCTGTCGGCATTCCGTCGATTAGGTTGCGAGC
GCCGGAGAGCATGTCGGCTGACATCTCCCGTGCGTGTCTCCTCGTCCCATCGAATGACGA
ACCACCGGCTACCGGTGTAGGGTTGAGGTCAATGTGCATAGGCGGGGGCGTGGATGGCGC
GATCACGCTCACCTCCAACGAGCATTCGTCTGGAAGACGAGAGGCTTAGAGGTAGACGTG
AAAGACGGGGATCGGATGAGTTGTCAGACACACAGAGGCGACTTGTAACACTATCCAAGG
AAAGGTAAACGAGCCTGTGCTGGCCGCCATGGCCACGGCGACGTTGACGAGCCCGTCCTA
GCCAGGATTTAACCCTAGGTACAAAAACGCTTCCCTTGTTACCGCCACGTGCAGGGGGAG
TCCTCCCGCTGCGCTGCCCCAGCTATGGTCCCAACGGCTACTGCTTCATTCCTAACTCCC
GCTGCGTGCCTCTGGCCCTTTCTCTTCATCAACTCCCAAGACCGCTCCTCGAGCGTCAAC
GTCCATGGCAAATGGCCGAGGAACGCACGTGAGCTGGCGAGCCAGAGGGAGTAGTTGGCA
CGCAGCACGCGTCCATCTTGTGTCCACGCCAACGCAAATCAAGCTTAAAAATGGATCGAC
AGACGAACAAAAGTACATTTGGGTTGGCATGTTGGGACAAAAGTACATTTGGGTTGGCAT
GTTGGGACTGTCGCCACGACCCAAACAAATGCACGCCGACAAAATGGGCAGACGCACCGG
AGTTGCTCTTAGAAGTTCCATTAAAGAACTACATACGAATGCATATAGTGATATCACTCA
TTTTACTCCGTAATGAGATATCTAAATAATACTCTCTCCGTAAACTAATATTAGAATGTT
TAGATCACCATTTTAGTAATCCAAACACTCTTATATTAATTTATAGAGGGAGTATATATT
CAGGAATGGAGAGAGTATAAAAAGAGTAGCTCATCGCCTAGATATGAAGGAAATGGGCCT
CGAATTGACTACTAGATATCTATTCAGAACATAATTCTTGCTCATATATACTCGCTCCGT
CCTATAATATAAACACATTTTTCAAGCTATATTTGCTTAAAAAAAACGTTCTTATATTAT
GGGACGGGAGTAGTACTCAACAAGGATCGCAGCATCAAACATCTGAACTAACGACAATCT
CAAACAAACCAAAAGCAAGACAGAAGTTGTAAACATCAAACACTTACTCAGGCTGTAAAC
ATCAAACACTTACTCAGGCAAACAGAAGTTGTAAATGGACTGAACGATTTACATAAATCA
AGAGTACTTGACTAGCAACTCGGTGCGGAAAAACAGATGGTAACTCATGTCCAACTAACA
TGAACCAGGCGTCTAGCGACACCATCCACATTTATTCCCATAGACAAAGGGGCACCTCTG
ACCAGGCGCCACAAGGAAAGCAGAACGCTCTACTGGGTCTTGGCCATGTGGCGGATCAGG
TCGACAACACGGTTGCTGCAGAGGAAAAAATTCAAAGTGTTACAGAATGAATCGATGAAA
TAGACATTGGACAGCAGGTTGTAGAAATAAATCCATTATGGCAACTCACCTGTAACCCCA
CTCGTTGTCATACCACGAGACAAGCTTGACGAAATGGTCGTTCAGAGCAATTCCAGCCTT
AGCATCAAAGATGCTGGACCTAATAAATGATAAAATATAGAATGGAGAACAGTTACTATC
TGATAACGCTCGGTAGCTTTTGCCAGCAGCATTACGACATTGAGCATACCTGCTGTCACC
AACGAAGTCGGTGGAGACCAAATCTTCCTCAACGTAACCCATGATACCCTTGAGCTTTCC
CTCGGAAGCAGCCCTGAAAATAATTTGCGTACTCTATTAGTGACATCTGGGAACGATATT
CGTAGAATCGTCACACATGCGCAGGCAGGCAGGAATTATAAGCAGGACTTTCTCAACAAC
TCTTCTACTTCTCATAGGAGATGCCCCAAGATCAAAGACTTACTTGATAGCCTTCTTGAT
GTCATCATATGATGCAGCCTTCTCGGTTCTAACAGTGAGATCAACAACTGACACATCCAC
AGTGGGAACCCGGAAAGACATACCGGTAAGCTTGCCATTCAGCTCAGGAAGAACCTTACC
AACAGCCTGAAACCCATCATAGCATTAGGTCAATAGAACAAAACTGCAATCAATTGATCA
AGTCCACTGGGAGCTCACAAATGAAATAAGCATGCACAATGTTTAGTGTATCATTTCACA
ATCATAGAATAATCTCCAAAGAAAAACATGGACCCAATATGCACAACATAAGCAATAGGT
AAAGAAGTAAGCAATCCATTCAAAACAGTGTCTGAAAACAAATGCACAATGCTATTGGTT
GCATACCTTGGCAGCACCAGTGCTGCTGGGGATGATGTTAAAGCTTGCGGCCCTGCCACC
TCTCCAGTCCTTGCTTGAGGGACCATCAACGGTCTTCTGTGTGGCTGAGAGGCAAGTTCA
CCAATGTCAAGTTAATGAGATTACTAAGGCAGATAACTTGAGAGCACAGCCAACAATATC
TTACCAGTGATGGCATGAACAGTGGTCATCAGACCCTCAATAATACCAAAGTTGTCATTA
ATGACCTGATGAATGATAATAAACATCATTACAAAATGAACCACAATCCCAGTAGTAGTG
AAGGTAAGATGATGACCAGAAACAGAACATACCTTAGCTAGGGGAGCAAGGCAGTTAGTG
GTGCAGCTAGCATTTGAGACAATGTTAACATCCGAGGTGTACTTGTCCTCATTGACACCA
ACCACAAACATAGGGGCATCTTTGCTTGGGGCAGAGATGACCACCTTCTTGGCACCACCC
TAATATTCAATGAACAATGCAAGTTATAATCACTTCACTAGTGTTGGAAATACATTGCAA
AAGCTAAGTCCCTGAAGAACAGTGGCACTCTTATACAGCTAGCACCAAAAAATAATTAAA
ATAAGCTACTAGAATAACCCAGCATTTGAGATAAACCAATAAAATTGATGGTCACTGTGA
TACTGAGTGGACTACCATGAATTCAGTGTTTACTACTAGCACACCTGAAGCAACCAAACA
CACAAAACAATTCAGAACAAACGGCATTACACTCTGCTTTACACTCCCCTGTGTGTGTTC
ATTTTTTATCATGTTTTCACACACTAAGAAGAAATAAATATATATGGAGCAGGACACATT
TTCTAATTGAAATTCAATAATACAAATGGATTCTTTCTCAGCCTCGTATTCAAAGGATCA
GAAAAGGCACATATATATAGCTCGGAACTAATGTGTGAATGAGCGAAAACCAGAACGTCA
GTTATACCTTCAAGTGAGCAGCGGCCTTGTCCTTGTCAGTGAAGACACCGGTGGACTCCA
CAACGTAATCAGCACCAGCCTCACCCCACGGGATCTCCTCAGGGTTCCTGTCAAGAGAAC
ATCAAACATTAGCTTGATAACTTAACAGACACAAACCTTCCGAAAAGGCTATAATATCAA
TACTACCTGACGCCAAAGACAGTAACTGGCTTCTCGCCGAAGAGCAGCGTCTTGTCGTCT
TTGAGCTTGATGTCACTGTGCTTCCAATGGCCGTGAACTGTGTCGTACTTGAACATGTAC
GTCTGCACATCACGCGAACCACAGAATTCAACTCAATTAAACAAACCAACCGAGCAGAAT
CATGATATCTCTTTTTGCGGTAGAGGATCATGATATCTGAAGGCATGCTACAGAGGCCGA
CTAATACTACTAGCATAATCAGGCAAGCAAACAAACAGATCACAGAAGCAGAAGCAGGCC
TCATGGAACAACAGAAGCAGGTATGCTAACAGAAGAAATCACAGGTAAAACCCCACAAAC
ATTTTAGACCACCAGATCTAGCTACCAGAGCGGGTGGAAATCGCAGATCGAGTGGCATAC
CATGTACTCGGTGGTGATGAAGGGGTCGTTGACGGCGACGAGCTCGACATCGTCGCTCTG
GAGTGCGACCCTGGCGACGAGCCTCCCGATCCTTCCGAAACCTGAGCAGAAACAGACACC
AGATCAAAACAGAGGCACCCACACGGTCACACCAGCACCGATCGGTGAACCTAGATGCGA
GCGCGAGAAGGAGACAGAAAACTCACCGTTGATTCCGATCTTAATCTTGCCTGCATGCGC
CCCAAACCAAGCAGAAAGAGCAGAAGAGCAAAATCGATCAGCAAAAAACAAGCGTCGTTC
AGATCAGGAGAAGAAGCGGCAGGAAATCGACGAGCGATTTACCCATGGCGAAGGAGTGGA
ACTGACGCCGCGACGCGAGATGGTGGTGGGGAGGTTCGCTGGGGACGGGGGAAGTGTCTG
GAAGCGGATATGGAGAGGTGGGGAGGGTTTAAGCGGCCGGTTTTATAAAGCCAGGAGCCC
AGGAGAGGAAAAGGCGAAATGGAATATCGAGGAGGCTAAGGCTGGTTTTAATGCGTAGTA
TGATATATTAGTATCACGTAGTATATGATATTAATGATAGTGCATCCGTAATGCTTAGTA
TCATATGTTTGTATTATAGGATAGTTTATTTATTGGCATGAAAGACACATAGTAGTATAT
CATTTTATATGATACGGTATCAGTATATGATACTCAACCCTCTCTTTTCTTACCTCAAAA
AATCATCTCTTTCTTCATTTAATTCTATGTCACTTCATCAAAATTGTTTAGTTGGCATGC
ATGATACTCCTTTCGTTTTTAAATATAAGTCTTTTAAGATGTTTTATTAGGAGTCTACAT
ACGAAGCAAAANNNNNNNNNNNNNNNNNNNNNNTATGTCTATATACATCCATATATAATA
CATTAATGAAACTTTTTTAAATACTTATATTTAAAAACAGAGGGAGTACTATATATATAT
ATATGCTGAACTTCTAT