Contig Data
morexGenes
Links



Map Locations of contig_157977 (2390 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_157977

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18223 1 2317 bp MLOC_18223.1 Available Available LOC_Os05g02690.1, FRAME:+2, EVALUE:3e-65, 13105.m00241 protein sensitivity to red light reduced protein 1, putative, expressed





CDS Structure of MLOC_18223






Contig Sequence (2390 bp)

>contig_157977 2390 assembly3_WGSMorex_rbca.fasta
CCCCCCCCCCCGATCTGCATAACCTCCGCATAACGTCCTGAAACATACCTTATACCAAGG
TAAACCGGGGCCGCCGGAGGGGAAACGCCCCGGTCCCCCCCTCCCCCCTCGACGCCCCGC
CGCCGCTCCCGTTGACCCCGATCCCGTGGTCGCCCTCCGACCCATCCCTCGACCCGACCC
GCGTCTCCCGCCTCCTCGACCGCGCCCGCGCCGCGATCTCCCGGATCGAGGCCTCCCGCC
TCTACCGCCGCCTCCTCCTCCCCGACTCCCCGCTCCGTCGCCGTCTCGCCTCGCTCGCCC
CCTCCCGCCTCTCCCTCCTCGGCGTCGGCAGCTTCGAGTCCTCCCCGGCCGCGCGCCTCC
AGCTCGCGCTCGCCGCCCTCCTCCGCCGGGACCTCCTCGCGAGCGCCTCCGCCACGGCCG
ACCTCTTCGACCCCGTCCTCTCCGCCGTCGAGTGCGCCGTCGCCGTCGCCCTCGGCTTCG
CCGTCCCGAGCCTCGACGACGGGTGCGGCCGCCGCGTGGAGGAGCCCACCCTCTTCTACA
TGCCCCACTGCGAGGCGTCGCTCTACGACGCGCTCCTCGGAGCCAACTGGGAGCCCCGCG
CTCAGCTCCGCCGCGTCTGCGTGCTCGGCAACAGCTTCCGGCGGTACGCTCTGCAGGCGG
AAGAGAACCGCTCGGGGCCCGCCGCCAAGGCCAATCTTGTTCTCAAGGCAGCGCGGTTCG
CGTGGGAGCAGCGGATCGACGACGCCGGGGATGTGGACGATGAGGACTGGTTCGCCCGTG
CGTTCAACGAGACGAGCTGGCATTTCTTCGAGGTGGACGAAGACGTCGGCCAGAGGACGG
AGATAAGTTCCCAAGCTTTGTCCTTCGAGAAATTATCACTGTAACCCAGTGTATTACGTA
CTTGATTCGAGATGCATTTGGAGATTCTGGGTTGGCATCTTCACAAAATTTATCACTGCA
ATTCTGTGATTGTATACTAGTATTTGATTGGAGATGAATTCACAGATTCATAGTTAGCAT
CTGAGCATAATTTGTCACTGTAATTCTATTATTGTATTGCTTGATTGGAGATTATATTCA
AAGATTCAGAGTTAGCATCTGAGCATAATTTATCACTGTAACTCTATGACTGTATTGCCT
GATTGGAGATTATATTCAAAGATTCAGAGTTGGCATCTTAATGAAATTTATCACTGTAAT
TCTATGATTATATACTACTACGTCTCTACCAAAATACTCCAAGATTCAGACAATTCTATG
AGTATAAGACAAAGATGTCTTATATTTTGATACGGAGGGAGTACTTGATTGGAGACAAAT
TCAAAGATTCAGAGTTGTCACTTAACACTGTAAATCTATGATCGTATTACTTGATTAGAG
ATATGCATTCCAAGATTCAGAGTTGGCATCTTAACGAAATTTGGAGTTTACTTTATCTTG
ATTTGCATTAAACAAGAACGAAAGCGGCATACATTTGTCTTTCTGAATTTAGACATTGAG
TCCCCACATTACTGGATGTGACCCATTTTCCAGTGTCCTGTGAGGTTTATCGGTTGATTT
TCTGATACGGGAAATGGGTACTCTGCCCTAGAACATAACCTGTAAGGCTGCTTCTTCCGT
TGGACATTTTTTATATGTTGTAGCTTGCAGAATGCAAGGAGAAATATAACACATGATCTA
AGGTTAACACTGAGCAGCCTGCTGTCTTATAACATTGAGAAAGGTAAAAGCAGATTGCTT
TGCCCCTCACATAACCAAAAGAAATCCCTAAGAACCCACAGGATCTATTCATCTTTCTAT
TTCCAGGAGCCATAGCACCATAATATTCTGAATTATCAGCTAAATTTACCTAATCTCTCC
TGGGCTCATTCTATACATGTGGCTGGAAATTAGATGTGATCTTTACATAACGGGAGCCCA
CCCTTTCCATTGGTCAAAGCTGTTGGAGGCCACCATCTGCAGCCCTCCAGATCCTAGTTG
GAGAACATTGCACACATTGCAAGGATGATGCATTGAAGGATTGAAAGTTCGTATCTTAGC
AAAATCTGGTGTTTACTTCATCTCGATTTCCGATGAAGAATGAAACCATGTCAATTGTTT
TATCCTTGTCTCACTCATAATTCAGACATCGAATGATCCCCCGATTTCCGGCAGCAAACC
ATTGAATTAAAAGTAAACTCTCAATGTGGTGTTGCATCTATCATTTTCAGGAAGCTTCGA
TGTCTCATGAGGTTAACTGTTTTTTTTTTGGTCATGGGTGCTCCACTATAACTTGCATGT
TCTATATACCCTCAGAACCTTACCCAGTTACCCGTAAGGCAGTACTCCCTCCGGTCCTTT
TTACTCCGTGTATTAGATTTCGGTCAAGTCAAACTTTGCAAAATTTGACC