morexGenes - Barley RNA-seq Database

Contig contig_1579658
Source Contig contig_1579658
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_1579658 (6302 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_1579658

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_18196	4	2738 bp	AK367917	Available	Available	None
CDS Structure of MLOC_18196

Contig Sequence (6302 bp)

>contig_1579658 6302 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGGTGTTATGAAGTATATTAGTATCCGTCTAGGAGTCCTGTATC
TCCTTTCTTGTACCTCAAGTCTTCTGTACTATATTAGTATCAAGTCTTTTGTACTATATA
TATGCCCCTTGGGCCTTGCAATACAATCAAGTTGCATCCATATGATATAACATTAATATC
CTTTTCAAATCTCCAATCCACAATGGGTAGATCTATCGCATATATGCGAACACATACTCA
CAAGCAATACATTTATCAAATTCAAAGTGGATTCCCCCAACCCTCTCTCAAACTGAGCTA
TTTCCACTTTTTCTAACACAAAGTTCAAGCTGTTTGATGAAAAAACCTTTTTTTTTAATC
CTTTCCTACTTTTTCTTTTAAAGTGCACTGGCATGCCGAAAGGTTGGCAACCATCCAAAC
AAAGACCAATGTTTGAGCCATGGCCAAATTTTTGGTAAGGTACACTTTGGCCACAATCCA
AACATTCCCATAGCCATGAAGAACTGAAGTGAGACAGAAATGTGAGACACTGGAGATATT
TAGCAGCATGATTGCAAGATTATAGGGTCAGTGTTTATGGCTTACCAGCTACGCACCAGT
TGATCAACTGGTGCAATGGGTGCAGTTCTTTGTGCTGAGACCGATGAGATGTAGTTAACC
ACACCATAATTGAAGACACTGAGATCAAAATAACCTAGAGCACAGTGACAGCTGTCAACA
CTATGTCAACTTAACTTTAACAAAATAAATATCGATACAACAAATTGCCTTTTGTACCTG
AACAAAAAATAGCTTGGAGGATTTAGGGGCTTGTTTGTTTGCTCGATTAAGATACAACCA
AAAGGTGCTGGTATTGATGGTCGCCCATCTCGAAGCCATTGCGATCAATATTATAAGTGC
CCCGCTAAAAATTCTGCATAAGTAAGATTCATCAAATATAATAAATGCAAGTAAAAACAA
AACAGAAAGATTAAAATGTGGTGGCAGTTAGTCATGTATGCCTTGACTCTCAATGTCATA
AATTTCAGAGAACAGCATCGGTAGCATATTATGTATATGTAATTTTTAAACTCTGAGGTG
TCAGCTAATATTAACAAATGAAAAAAAAACATTGTATTAATATACTGTGAGCAAAGAAGC
ATACACTAAGTTGTTATTCTCTGGAATTTCAGCTGGCATCAATGTGAATACAGACAGGAA
CCAGCATGCGAGCCATGTGTATATTGCAACAGCAGGGCTAGCTTCAATAGAAAAGGCTCC
GCAGACTGAAGCTAGTACCCCAAGGGCCAAAAAGCACCATGTATAAAGCTTCCGATCAAA
GAAGCTCATAACCTGCACAGAAGTATCAAATCCTATGTCAAATCTCAGTCTTATAAGTTA
AATATTTTAGGTGTCAATAACAGGTTGTGTACGCACCAGAAACTCCAATATGAGCAATGC
AGCAACCGAACTGATCAGAAGATTCATAATGTACTTGAATGGCATATTAAACAATTCCCT
CCATGCTGACTTCATGAATTCGTAGTTTTGTACAATTCTTGTCCAGAGGAATATTGTCAT
AAATACATAAGCATGGTAAAGTGGTGGAGATTTCTCTAGAAGTAGTATAATGGATGATAA
ACCCATGAACAAGCATCCACCTATGTATACCTGAAACCGGGAGAGATAAGATGAAAATAG
TGTAAAAGTACCACATCAGCTGTCACCAAATAGAAAAGACATTCCAGTAAATTATAATTA
TAATTCATCATTTTTCAAGTAACTTTGAACAGTTCACAAGAATGAATAAGTACCAAACCC
ATATATTTTGAACATAATTCTGTCTGACGCTTATGTAAATTTTACAGCAATGCTGGATTT
CATTAGGGAAAATAAGAGTATCTGAGAGAAAAAGAATGAATAAGTACCAAAACCATATAT
TCTGAACATAATTCAATCTGACGCTTATGTAAATTTTATAGCAATGCTGGATTTCATTAG
GAAAAGTAAGAGTATCTGAGAGAAACAGAAACAAAACATATGTGAAGTAGATAAAAAATA
TATTGATGGCAATCCACCCTGAGCAAGCTAAAGGAGGGAAAGTCCATGGACTGACTCCAT
TGTCTCGACCCATTAGGAACTACGAGATCGCCGCAAGGACACCTTCGGCATCCAGGAGTC
AATATAGCAACAGAAGCATGTGTTCAGACAACGTTAGACACAGAATCGTACTTGGACAAT
CTTACTTTCATGGAGGTATTCTTGGGATACACCTGAGTCCTCTTTAGAAGATTAGCAGGA
AATGTTGTATAAGACTGTAGCACATGTAGAATGAGGTTTGCCATCCATCCAATGTATCCA
AGGGTAATTGTTGTCATTAACATGAACCAGTCGTATGTTTGGAAATAATGGAGGCCAGCA
AGAGCCATACTACGTAGCTCTTCAGAATACTTCATGGCAGTTTTGTAGTCCCTTGCAGAT
ATTAGATCTTCGATTCGATCGAGGACAGACGAATAGTTCACCAGTGGTTTAAAAGGCTTG
AAATAGAGTGAACTGGATTGCTTCTGCTCTGAGATTGTCAAGGAAAGACATGTATGGAAT
AAGAATATCATTTGATGTATTCAGCTTGGAGGTGGTAAATTTGCATAAAGTACAAAGGTG
ATTGACATGATGGGATAACAGTTTCCAATGGTCTGCTGTAAAACATTGACTTCAGCGGAC
AAATAATGAAACAGTCCCATCAATCATTATCATTTCCAAATCTTATGTACAATTGAGTGC
AACAGCCTACTAGCTTAGAAGAGTGGAGTAAGAAAAAAAAATCCAAATATGTTTCAGATC
TTGTTCTGAATGGGTACCTGACTTCTGGAGAAACTGGTTAAGAATTTGTTTTGTGTTGGC
CAGAACTGCTTCAACTTCATCAGACTGTAAAATAAAAGAGAAATAATTGGGATATAGAAT
TCAACGAGAAGTTTGCAAGCCAAGGCTGCAAGCACAAAATAACTTTTGGATAGTACTGTG
GTGTTTATTGTCTAACCTTGCTTAACTTCAGATAATGAGAAGGTAAGTTCCCCACAGAAT
TCAAAGGGCATGACAGACCAACAAGTGTAGCCTGCAAAATTTATGAACAACTGAGAAAAT
GCAATATTGTGTTTACAAATGTAGAACATGCTGAGGAAGAAAGGAAAACAAGGTTTCCTA
TTGTAAACAACCATTAGAGGAGCTATATCAGCCTGGTTGACATCGACTCTTTCGAAGCCT
TCAAGAGCCCAGTTCTGTGGCGTGGGCATATCGTGTCTGTGGTCATCAACAAACCGAAAG
CCATCATCAGGTTTGTCTGTATAGGCCAAGAATTTTGGGCTCCTGATTCCAGCCCCCCAT
GCTACAAGTGGAGTATCGGTATTTGAAGGGTGTCCGTCTCCATGGCTTCCTATCAGTAGA
AATGCATAATTATATTAGTATCATAAAGACACTGGCATCATAAGATATGATGAGCCATGT
ACTACCGACCAACCCTATTCTCCAAAATACAAGTGAAAAATCAAAATTGGCATCATTAAA
ATGCACAACCCTACTCTACAGAATAAAAATAAAGCAAGAAGCAGAAGCCTCTGGTATTAC
TAACAGGTCAGCAATACATTAAGAAGTCATTGTGATGCACAGCACCCTGAGGCAATACCA
TGCAAACTTAGACCAAAATCAGTACACTGTGGAGTGTTAAGATGCCATGCCATGAGCTGT
CAAACCCTGTAGGTCCAGAACTTTATAGGGATCTCTAGCCCTAAAAAGCATATGGAAAAA
ACGAAAAAGGGAAGGGAAGTTGATGGGTGAAAACATTGTGTATAATACTTTATCGTACCT
TTGTCGCTCATTCCATGATCTGCAGTAAAAACATAAGCTGTTTGGTTGTCATTGAAGTAA
CTTTCCATGAGATTGTACATTCTCTCAGCTATTTCATCAACAACCTTGACATTGTTCAGA
TAGATGCTTGAATAGGGCCGATGTGCATGACCATTAGAATCACAACCCAGCAAGTGCAGA
AATATAACCAACTTATCCTGTAGGAGCAACTGCCTCAATTTAACATCATCAAGAGACCTG
TTGAGAAGACCTTCAAACTGGTCAAATGACCAATGATCCAAAAATGATGCATCTGCAATC
AAGGTCTCTAACCAAGTAAATAAGTGATTCCATAGATAAAACAAATCGGAAAAGTAGAGG
ATTGATGCCATAGATTATGTGATATTTAGAGTTTCAATTGGATCAAAACATTCAGATATT
CATACAAGAAATATAGCAATTCCAGTATTAACTTTTTTTAACTCGTCGCACAAAAGGTTA
TAAGTTCAACAATGGTAATCGCGAGTTCGCAGATCTGGAACCCTATTCACATCCAAATTA
TCAACTCAAAGACTGTAACATGCTCCCTCCGTCCCATAATATAAGAGCGTTTTTTTACAC
TAGTGTACTGTCAAAAACGCTCTTATATTATGGGATGGAGGGAGTAACTTTTAGAGTACA
CGAATATTCAGTATAATGTGCATGCATTAAGTAAGCACAGCGTTACCAATATACGGTGAC
AAGGGCACAAGATGATTCTCTGATTGTCATATAAATCAAAACACGGTAAAATACAGATGA
CCCCATTGCGAATTTGTTGCATGCAGTATCAATAAGTCTGACCTGTTGCAAAGTCTTCGT
ATTCATGTGGATAACTACCCCAGGTACTGTGAGGTAGGCTGCTACAGAATATAGGAACAA
TATCTGGACTCCCAAACGAGATAGTGTGTCGACTTTGATTGAATACAGAATCAAACTCAA
CTGGATTGGCCTTCCATCCTGCACTAACAATAAGTAAAATGTGTGAACATCGTGGAAGCA
ATTTCATGCAACAAGTCATCAGTTCCTAAATTTATCTCTGAAGTGCCTTCATACCCCAAA
TTTCCAATAACACAAAACAAACTATCGTACAACCTCAGGGAATAGCACTATAATTGGTGT
TTGTTAATTATAATCAATTGCAGACCGTAAATCCTACAATTTCAATCAATCATACTCAGA
TGGACCATGGTCACTGGTACGTGGTCCAGTACATGCATAGTGGCCAGTATGTCGGTGGAC
TGTGGGAACAAGTACCACCCGCACTATTCCAGTAGTAACAGAAAAAAACAATCGCACCTT
ATGCATACATATCACTCCAAAGTCCTGATAACTGCCAAGGAAGCCCTTACCAGATTAAGC
AATGCAGAAAGTGAATCCAGTAGACTAGAATATTACAGCAAGCTGAATGACTTGTTGTAA
AGACATGTCCATGTGAGTCTTGTCGAGTCCAAGGTATTTCCGTGACTTAACCTGTCATTG
TTCTTATCCACAAACACCCACCACTGAAAACTGACGCCAAAGTTGTAACTGAGACGGTGT
GTTCTAATCAAATTGCTCACATAACTCCTAAAAGCAAAAATAACTAATGATGTCGACACA
TTGTACACCCCAGTGCTGCTTCAGGCTACTCCTCTTCCCTAACCGCACCTCCATACCACA
AATTTCCAATAAACAAGCTATCACACGACAGCAGGGAATAGAACTATTAAGTGGTGTTTG
TTAATTATAATCAGTGCAGGCTGTAAATCCTATACTTTCAATGAATCATACTCCGATGGA
CCATGCTCACTGGTACGTGGTCCAGTACATGCATAGTGGCCAATATGTCAGTGGACTGTG
GGAACAAGTGCCACCCGCACTATTCCAGTAGTAACAAAAAAAAAATCGCACCTGATGCAC
ACATCACTTGAAAGTCCTGATTGTCAGGAAATATGCAACTTGTATTATTAGGAGGCCAAA
GCCAACATATATACACATACATGAGGATGCCAAAAGGCTACAGGAGAATGCCAAGAGACT
AGAATGCAAAAGGCCAAAAGACATCACTAATATAACTCTAACCACACCACCCCCACCACC
ACCTCAAACTCATGGTGGATCCACAACACTGAGTTGGGAAAGGTGAAATCCATGTTGCGC
TCTAGTCTGGGCCTTCGTGAAGAAGTCTGCTAGTTGTAACTCAGAAGGCACATACTGAAG
AGCAACAACATGATCCTGCACAGCAGCTCGCACATAAAAAACATCAACACCAATATGCTT
GGTAAGCTCATGCTTCACGGGATCCCACGCAGTACTGATAGCACATGTACTGTCTGACAA
GAGGGTGGTAGGTGTAGTAACAGAAACACCAAAATCCTCTAGTAACCATCATAACCAAGT
CACCTCTGCCGTCAGAAGAGCCATAGCTCGCAACTCAGCCTCTGCCCTCGAACGGGAAAC
TG