Contig Data
morexGenes
Links



Map Locations of contig_1579620 (4498 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1579620

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18190 2 484 bp MLOC_18190.1 Available Available None
MLOC_18189 3 1727 bp MLOC_18189.1 Available Available None





CDS Structure of MLOC_18190






CDS Structure of MLOC_18189






Contig Sequence (4498 bp)

>contig_1579620 4498 assembly3_WGSMorex_rbca.fasta
TATTTGGTTCACGCTCCGCCACTGCCAGAATGCGACGATGTTGAAGAGAACATGCACTGT
AAAGCTAATTTGGAAGAGAGGGAGAAATAGCATGATATCTTATCATCGTTCATGTAGGTT
AGCCCAATCGCAGTGTCTAGTAATGATGCAATTGCCAACCAGAAGTAGCTAGTCTAGTTT
CACACCTTCTTTTTCACACAAACTTCTTCTATCAATGCATTGAGACGTAGGGCCTTTTTT
CTCAAAAATATTGTTTCCCTTGAATACCTAAATCCATGAACAAATTATGGCATCCATAAG
CATAGACCTACAGATATCTTAATTAAATTTTAGTCAGCACAGCTTTTCAGACAAATACCA
CTAATCAAATGTTCACAAGAAATGCCGAGCACACGATAAGCACTGAGTGTGGAGCACAGG
CATAAGAAGGATCAACCTGAAGCTCACAGGCATTCCTCTCAAAGGTTTGCAAATGCTTTT
TTACTCAAACAAAATCAATGCCTCAGAATTCAAATGCAGAGCATCGTCAGGAAGCCAATG
ACGTGAAAACAAACCCTGGATTACATCTTAACTGGACTTGAAGCATGCAAGTCTAACGGC
ACAACATAATATCGCCCCTACTGCTAGTCCGGCGTACGAACTCGCAAGGCAACCTGGGAG
CCGCAGTGTCCAATCCCCGGTCTCTAGTGTCAGATCAGATCCCGCCGAAACGCCCGCACA
GGATACTGACCGCAGAAATCTAGAGACAGCAATAGCGCTACTAAGCATCGCCAAACATCA
GCAAGATTAATTCGTACTTACGCGAAGAACAGAGTCGAATCAGATCACCTGTGGAACAAG
ATCCAGTTTCCCGGCGAGGGGGCTGGGAGGTGGGGGGTGATCTGCAGGAATGCGGCAAAC
GATCTGAGACCAGGAACTCGAACTGAACAAATTGGCTACTGGAAGTTTTTTCTTTTAGTT
ACCTATGGGCTGCGGTGATGCTTGCTACGGATTTGCTGGCGCGAGCACTAGAAACTGTCA
GCAATTTCTCGGCGAGGGAAACGGAAGGGGAATATTTTTTTCCGCGGCGCCTTGTAGGAA
ATATAAATGTTTCTCCCCAGTGAGCTGGGCCTGCGTATTTGGTTAGAACTGGTCCAGCAG
TCTAACGAAAAAGATTAAAATAAAAAAGCATTCGCAAACCAATCCGTAATTAGATGGTTA
GGAGGACATGGTTAGAAAAATAGAAAAGCAGGCTGGTCATTTTGTGAGCTCCTAAAAATG
CCATTCGGATATCCACCTAATTTTGTGAGCATATATTTTTCTAGGGACCGACTAATAGTC
AGGTGCCTGTAATTTTATTTTGGATTCCCTGTCTAGAAAAAAGACTGAAAACATAAAACA
ATTCGGTTGATTTTTAGTTGTCAAGATGAATGCCCGGGAAAAAACAAAAAAAAAATCCAA
ACCTATAAATGTGAACCACAAGTAGGCTTGGCCTAATTAATAATGGAATAAAGCTCTTTT
TCATTAGCAAAACAAAAATCCAATCACTGCTCAACCAAACTGCAGAATGGGCCAAACTGA
CCAATTATTTTTTTTGCCGGGAAGCTAACCAAAATTTGTAGGAGCGGTTTTACCTGATAG
AAATTTGAACAAAGACAAAAACAAAGATGAACAAATTTTCTTTCTAAGAACAAATGAATC
ATGGGAGTGCTTTAAAGCTAAAATAAACAGCAATAACATTTTTTTAGACTTCCACATAGT
GTACAATAAACAACAATAACATTTATAAAAAATAAAAACTTATTTTGAGACTTTGTTCTT
ATATACAGGAACTAGAAATTTGAACTAAAAAATAAAAGCTTGTTTTGAGACTTTCACATA
AATTACATAAAACTTGCAATCTTACGTTCTATGCAAGAGCAAGTGTACACTAGTGTAACT
TTGCTAATAACTACAATTTGGATCGATTTCCAAAGTAAATTCCATCTTAAGTGCCTAATA
AAAATTAATTAAGGTCACATGGTTGCACCACTGCAATATGCACACATGTAACAGAAAAAT
CCAACAACTAAAAATTCAACTAAACAAGAACAACAAAAACTACAACCAGAAGCATAAGCA
CAGTCGTGGAAAAAAACAATTGTTATTCATAGAATAAATTAAGAGCATTGATAATACCCA
AATGAAATAAGAAAGAAAATTAAGCAATAACAACAATTAGTGGAGCCAGCAACAATAGCA
CTAGCAAAAAAAGTGCCACGTGGTTGAAATCATCAAACCACTTATGTATGCACAAATATA
GAAAAAAAAGTGAGAAAGTATAAATGTTATTCCAATGTAGAATGAATTATGGCATTGCTA
TTACCCAAAAGAATAAAGAAAATAAAAAAACAAAGTCTAACAACCAAAAGATTGACTAGG
CCAAAAAATCAGAGCAACAATATTGGCATGAGCGAGAAAATATTAAAAAAAATGTTATTC
TAAGGTACAATCAATTATGGCTTTGGTATTATCCAGAAGAATAAAGAAAATGAAGAAATA
AAAATCTAACCAAAAATTGGAACTAGCAATATTAGCATGAGTGAGAAAACAAAAACATCA
ACAAGAACAAAAAACATTCTAAGCAAGAATGAATGGTAGCATTGGTGTTACCCAAAACAA
GAAGAAACATCTAACAACAACAAAATTGACTAGGCAAAAATATTGGAGCCAACCATATTA
GAACAAGCAAAAAAAACAGATACATAAACATAAACAAATATTATTCTAAGCTAGAATAAA
ATAAAGACATTGGTATTACAGACAAGAAGAAATAAAATGAATTAAGAAATGATCAAGTAA
ATGATTGTGAAAATTTGCACATATATTTCATAAAACTTGTACTATTCTACGATATTCAAG
AGCACCTATATAAAATTGTAACTTTTTAATCACAATGTGATTTTGCACTCTTGTTGCATA
GAAATAACACTATATGTCTATGTACTAATTAGTACTCAAACAAAAAAAATGAAGGTTACT
AAAAAAATGTATCTCATGTCAGTGGTGTCATCTCCTCATGTATCTCATATGCATGCACCC
ACACCCACACACACAGTGCATGCCCACACATTGATATGTACACACATTGAAAATTGTGGA
CGAGGAGGCCCAAATGCAGTAAACATAGAACAAAGACAACTTCACACAAGAGTAAACCTC
GGCATTCTTCGAGCCGAGCCAGGTTTCAGGTCGGGCTTGTAAAAGCCCAACGGGAAAACA
TCTAGGTCCAAATCCGGTGAGGGAGTCTGGAACTAAAGGGTCCTCGAGCCGCCGGTCTAT
CTCTACTAGCCGGACTCATGGACCACTTCGGACAACTGATGACACATACCATGAAGATTC
CACAAGACTTGGTGATCAAGACAAGGACTCTTCTACACCGACGTAACCGACTAGGACTCT
TAGTATCATAGGCCTATGGTGCATTATATAAACCAAGGTGAGGTTAGTCGATAGACAATC
TCATATTGGGACAGGTTAAGTTCATTACCCATAGTGTTTAGACCACACTAGTAGAAAACA
TGACTTTTGCCCTAGCCAGATCGGAGCAATAGTCCCGGTTGCGTTACGAACCGAGACTAA
TGTGAGCATTAGTCTCGGTTCGAGCGACTAGGACGTCGGACGGAGCTCGGTAAGCATTAG
TCCCGGTTTGAAAGAGACCTTTAGTCTCGATTGGAGGCACTAACTAGGACTAAAGGTCTC
CTTTTTGGCGGACCAAATTCCATGTGGGAAGGGACGTTTAGTCCCGGTTGGTGGCTCAAC
CGGGACTAAAGGTCTATTTTCTTTTTTTGTCTTGTTTTTGTTTTTTTAAACAAGACAATT
TCTGTTTTTAGATTTGAAATAAGTGTTAAAATATTTATAGTTTTTGAATGAATCTTTTTT
GCTTTAGGACACAAAAAATTATAAAACTTCTGTTAGTGCCAGTAGTTTTCAAATTTGAAT
ATTTTAAATTTGAATTCTTTTAAATTTGTGTGAATCAATACTTTGTGAATAACTTTACTT
TAAAAATAGATTTTTGAGTGATTCTTTTTACTGGTATTTAATATTAGTGTGTTTTATCAT
NNNNNNNAATTTGGTAATTTTTAGGTTATTTTAAATGTGTTTTCTGATTAAAAAATAGAT
TTTGTTTAACTCTTTTAGTTTATAGCTCAAAAAAATCATCAAATGCATGAAAAATGGCAA
ATGAAGTCAGAAAGGGTTGAAATTGATGATCTGTCTTTGAATGGTTCATATTGAATGCAT
AAAAAGTCTGGAGTTATAATAAGTTTTAAAAAATGAAATGCCTTTATAACACACAAGTTT
TCGTTCGAAACCCTCATACTTCGAAATAGATTGTCCAGTTTGTACATAAAGTGCATCCAG
TTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNATGCTATGTGGGTGAAATTATGAAACTA
TGCCAAGTTTCAACCTTTTTAAAGTTCATTTATAGTGTTTTTCAATGTCACGGTCATT