| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1579478
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_18156 |
1 |
966 bp |
MLOC_18156.1 |
Available |
Available |
LOC_Os06g15820.1, FRAME:+1, EVALUE:3e-55, 13106.m01745 protein NHL repeat-containing protein, putative, expressed |
| MLOC_18157 |
1 |
1053 bp |
MLOC_18157.1 |
Available |
Available |
LOC_Os06g15820.1, FRAME:+1, EVALUE:3e-25, 13106.m01745 protein NHL repeat-containing protein, putative, expressed |
CDS Structure of MLOC_18156
CDS Structure of MLOC_18157
Contig Sequence (2233 bp)
>contig_1579478 2233 assembly3_WGSMorex_rbca.fasta
AGACGCGCTCGCCGGAGGGGGTCGTTTGGCGGTCGACAGGGTCAGCAGCGGCGGCGCCCA
TGGCGCAGGGCCTGAGAGGGGAGGGAAGCTGGAGGTTGCGCCGGCGAGGACGGTGGAGGC
TGCAGACGGCGGGGCTAGGCTAGAAGGTGGAGGCGCAGCAGGGAGCGGGAGCGGAGCGGA
GCCATTCCTTCTTTCACATAGATCATTTACCGGCTTACATAGGGAATTTTGAAACTGATT
TTGTTATTCTGAGGAAAACATCATGCACACTTGCTGGCAGCATGGGTTGGTAACTAGGGC
AGGGTCTATGCTGGACCATGGTTCTACAGGTCTGCTGGTTTACAGCAGGCCATCTCATGA
GTACGTTACAGTCAGCCTTGGGTCACCTAGATGTGGTGTCCATCATCCTTATGCCCACAG
CGTTCACCCATTCATCATAGAGGTGCTATGAACTCACATTATTATTCCTCTAGGGGGAGT
CTAGATCATTACTAAAGTAAAAGCATATTCTTCAGAACTACTCCAGCAAGAACTACTCCA
GCAAATTTACAGTGACCTTCTTGGCAACTGAAATCTCACCATGCAGGAACCTCAGACGCC
TCCAAGACCAAGCAATGCAAGCATCCCTCCATACCAACCATACCAACAGCCATTCAAGCC
TTCGTTTCGCCCGCCGCTGATCCCAAATGAAGACGAAGCTGGGAAGCATGAAGCTGAAGA
GGGATTCTTCACCTCAGTGGGCAAGCTCATGGGAGGAGCAAAATCATCCGTGGCAGACAT
GTTTTCCCGAAAGAAGCGCCCCGCGAGACAGCATCATCAGCACCACCAGCAGAGAAGAGC
CAACCCTTGGCCGGTGCAAGATAGCTACGCCATCCCGCACGAGGAAACGCCTCCGCCGCT
CGACTCGAGAGGACCGACCCCTCAGAAGAACTACGGCTTCATGACGACGGAGCCTGAGAA
GGCTCACCACCTCCGGCACGGGCAGCCTTATCTCGGCGGCTGGGATGCACGCGGCCCTCA
ACAACAGCAACAAGTGTATCCCCATCACCAGCAGCAGCAGCAGCAGCAGCAGCACAGACA
GCAGTTGGAGCAGCAGGTGTACCGGCAGCAGCAGCAGCAGCACAGGCAGCCGCCGGAGCA
GCAGGCGTACCACCTGCAGCAGCACCAGCAGAGGAGGCAGCCGGAGCAGCAGATGTACCA
GCTGCAGCAGCACAGGCAGTACTCGTCCGGGCCGCAGACTTTCTATGAGCAGAGCTGCGA
GACGACGAATGAGGTGGTGTTCGGCGCGGTGCAGGAGGTGGACAGCAAGCGGCGCATGGT
GGAGATCAAGGCCGTCAACTACGGCGACACCTTCTACGAGCAGTACGGGATGCGCTACCG
CAACAACTACATCGGCTACAACAGCAACAACTACTGACAGATCGAGAAATGGAAGGCAAT
GGGAGAAAAATGGAAGAAGAGGTAGTAGGAATTAGTAGTCTCCCATGTCTTGCTTAGATT
GTGCAATGGAAGCGCTGAGGTTTTGGTAGTGTACCCTGATGAATGATGATCACAGATTTC
TGGCCTAACTTTTTGTATGTATAGCGCTCTAGTCTCAGCTGCTGTGACGAGTACAATTCA
ATTGCATACTTTTCGGCCATGTCTTGGTGGTAGCTCTAGAACTAGAACTTCTCTGAAGGT
AAATAACAGAATCACGCGCAACACATGGATGAGAAGGAACCGACCCGGAAAATAAATACT
AGGACCTAGTGTTACTCAAAATCAAGAATTGCAATCATCACGGCATCTTCAGAACCACAT
CATGATCGGATTCAAGGAGAATTTCAGAAAATTAAAGCAGCGGGGGCGGCAAGTTTCACA
TAACTGACGGCAAACTGGGACCGAATCGGATTCAGAGAAAGGAAATTTGACGCGTCCTCC
GTCGCATGCAAAACCATCGTCTATAAATATCAGTATCCCTTGTCGTCCCAAATCCCAGTC
GCTCGCCATCCATCCACATCAACCCCTTCACAGCTACTCCTAGAACCCTAGCACCAGATC
GGGCGACCGCCGGCCAAGATGGAAGGGCTCGACGTCGACGACGTCTTCCAGCACTGCCGG
CTGAACCCTACGGAGGTGGACGCCGTCACCTACTACCTGCCACGCCTCCTCTCCGGCGAG
ACGCTGCACGGCGTCGAGAAGCTCATCCACAGCGTCGAAATCTCCGGCTGCGAGCCCAAG
GATCTCGCCGCCC
