Map Locations of contig_157932 (3805 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_157932

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18123 6 1994 bp AK248140.1 Available Available None





CDS Structure of MLOC_18123






Contig Sequence (3805 bp)

>contig_157932 3805 assembly3_WGSMorex_rbca.fasta
GAGACCCCCGCCCCAATTTTATTTATTTATTTATATCTTACCTCCTGCTATTTATCCCTC
CCATCATCTGTAACTGTTCCCATTAGGAGAGGATTTCTCTTCCGCAAACTTGTTGAATTT
TCTTTCTTCTTGCTTCTCCCAAATCCCCGCACTTGCTCCTGCTCCCCCCCCATCCAGGTA
GATTGAGCATTTTTTGGTCTAGATCTTTCGCTGCCGCAAGATCTGAACCCCACCCACGGC
GACGGCGACGGCGACGGCGATGAGGCCGGACACGCGCCTCGACTCGGCCGCGTTCCAGCT
CACTCCGACCCGCACCAGGTAACTCAAGCTCAAGCTCAACCTCCCATCCCTCCCATAATA
TGCGGATCTGCGCCGCCAGCAAACCAATCCCCAATCTTTGCAAAGCTCTGCTCTTTCTCC
CAGAGGTGATAGATCCAGGGTTCATACTTATTGCTCAATTTTGTCTTATGCTGATTACTC
TACCTTACTGATTGGCATCTGCAACAATTTCTTTTCTTTTATGTGTGTGTGTGTGTGTGT
GTGTGTGTCGGTAACAGTAGCATCACAAGGAATTTTTACCCCCTTTCTTTCTTTCTTTCT
TTCTTTTTTCTAGGTGTGATTTGGTTGTGGTGGTGAATGGGAGGAAGGAGAAGATCGCCT
CCGGCCTGCTCAACCCCTTCGTCGCGCACCTGAAGGCCGCCCAGGACCAGATCGCCAAGG
GTGGCTACACCATCCTGCTCCAGCCCGATCCGGGTGCCGACGCGCCATGGTTCACCAGGG
GCACCATCCAGAGGTTCGTCCTCTGTCCGTCGTGTTTGTTTGGCTGCCGACACTGACATT
TTGCTCCTTTCTTGTTGGCATTAGGTTCGTCCGTTTCGTGAGCACGCCGGAGGTCCTGGA
GCGGGTCACCACCATCGAGTCCGAGATACTGCAGCTCCACGACGCCATCGCCGTCCAGAA
CAATGCAAATATTGGACTCAAATCTGTAAGTGCACGACTATCATCTCTAATGTAATGTGT
ACCTGTTTGTTTGTCTGTCTGTTGAGAGTAATAATTAGCAGACCGGTGACATGTTTGTGT
TTGGGATTTGCCAGGCAGAAGGCTATAATGTGGACTCCTCCATGGAAGGTACAATACAAG
AGATGCTACCGACTTCATTTCTACCAATAAATCTTGGGCAATGCTTGTTCGTAAATGGAA
ATGCAGATGCTGCTGTTTTAAAATCTATCATCCGTTATGGACTTTGGTACGGTGTACCAT
CGGTCACAGCTGTTGTGTTAGCCAGTTGGTTAGGTAGTACTACATGATAGTGGACGGCAC
AAAAGTATTTTTATGTTTGATGCATGTCCTGTCCTGATTCGTGCTTACACATTCTCTTCT
GTTTTACCTAACTTATGTCGGAAGCTGATTATTCTATAAGATGGATGTAACCATCATTAA
GTGCACTAGTTTTCAGGACGATTCGTACCTGCATAAAAATTAATCCTGAGGGATTTATAC
ATGTTTCCTCATGATAGTTTGATCTGAACTGAAACATGATTTTGCGTCCCGTTTTCCGTC
GACAAATATACCTGACATGCCCCTTTACAGGTAGCAAGACAAGTTATGATCCTGATGGTG
ATAAGGCACTCGTTCTGTACAAGGTATGGCTGTGTCGATAGGTAATAAAACTGTTTTTTC
GCTATGTAAATGTCGTGGTAAGAGGGGTTTATAACTCTCATGTTTTTTTGCATCAATGAC
AGCCTGGCACACATCCAGCATCAACACTGCAGAGCGACACTGGAGTACACGAGGAGCATT
CAAAGTATTTATTTCTCACATTCTTTTCCTGCTTTCATCTAATGAACGGTTTCTCACACT
CATTCTACAGCCAAATCCAGCTCTTTGATTTCTTTATCTGCACTCTTTTTTGGGATGATG
TCTTGTTTTTTGGAATTTCCTTTTTTATCTGCATTGTGGTAAGGTGTGAATGGATTTTTT
TTACAATGTTTTGCAGAGTTCAACTTCTCAGAGTGCTGGAGACTCGCAAGACTGTCTTAC
GTAAAGAGCAGGCTATGGCCTTTGCCCGTGCTGTAGCTGCTGGTTTTGATATAGACAACC
TGCTATATTTGATATCGTTCGCAGAGCGTTTTGGTGCTTCACGCTTGATGTAAGTATGCC
TTCTAATAGATGAAATAGTATCATGCTTGATGTACCGGATCTTTCCATTGGATACGGCTT
ATATTCCTCTAGATGATGTGAACCTGAGGCTGCTGATTATCCTCATATGCATAATGCATT
CCATTCTGATGCTAATTATACAGGCTTGTTGAATGTTGCTGCAATGCACAAGTAGCTTAA
GCAATTTCTGTGAGTGCAAAAGTACCAAATCTGTTCCGCTAACTGTGTTGGTGTTCGCTA
TCAATTAATAGGAAGGCGTGTACACAGTTCATTGATTTGTGGAGGCAAAAACATGAAACT
GGACAGTGGATTGACGTTGAACCTGAAGCAATGTCTGCACGCTCTGAATTTCCTCCCTTC
AATGCTGCTGGCATTATGTTAATGGGAGATAAAGAAACAATGTCTGTCTCTAATGGAGAT
ACAAATGGCGAAGATGCTGCTAAAGCTGGTACGTTGGTGCCATCACTTTGCGTACTTTCC
AAATGCTCACAAGAACCCTTTGTTTTGTATTTGTATTAGATAAGTGAACTGTGTTACCTG
CATCATGCAGGCTGCATGACCGTTCACTTTATTTCTTCCATAACCCATACCAACGTTTTA
TTTTAAGTTTTCTGTTAACTGAAAATTGTGACCAAAATTATTCGTAAATATTGCCGCCTT
GTGCTTATTTTCACACGACAATTTTTCTTCCAATTTGAAATGCCCTTTTGCCTGGTTATT
ACTGCACAGGCACGTTGAGTTTGTACCCTTTTTTTTGTCAACCTATGTACATAATTGATG
CATGTTTCGCCTTTTCTTCTTTACTGTGGGAGAGAACTTGGATCTGAGGAATCAGTTTTC
TGTTGCTTGACAGATCACAGGACACCTCAACACTTAGGAGCTCCCCATCGTGGTCCATAT
CAATCAGGATATCCACCATGGGCAATGCATCCGCCTTACCCCATGCAAGGCATGCCACCA
TACTACCCTGGGGCAAACCCATATTACCCTCCTCCCTACCCCCCAACAGATGATCCCAGG
TACAACCACTCAGAAAGGAGACCATCAAGGAAGAACTCATCAGATAGCAAGGACTTCGAC
AACTCTGATGATGAGAGTGATGACGAAAGTGGTTCAGAGAGGGAGAGTTCTCATGGCCGC
AAGTCGAGTAAAAAGGGCAATCGGTCAGGCAAGAAAAAATCTAATGTAATTGTTATACGC
AATGTAAATGTAACATCAAGGAAGAAGCATGGGTCATCAGAGAGCGAGTCTCAATCAGGT
TCTGATGTGGCATCAGAGGATAGTGATGATTCACACAGAAAATCCAGCAAGAGGAATCAT
CATAAGCGCTCGAGCTCGAAGAAAAAAGGGGGCAAGAAAACCACTGTTGAGTCTGAAGAT
GAGTACACCAAGGATGAAGTGTCTAATGGGCATCAAGATGGAGATCAAGGAAACTGGAAT
GCGTTCCAGAATTTCTTGCTCAGAGACGAAGAGAAGACAAGAGATGATAATGACGCGGAC
ATGTTCGCTGGCGAAAGAGGGCCACCACCACCCTCTAGGAGGAAAGAGAACACAAGAAAT
ATGGATGATCCTATTCTTTTATCCGATCGAGGTTCCGCTGATGTCAACGAGCGGAATGCA
ATACCTTTCAACACAGCCAATGGGA