Contig Data
morexGenes
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Map Locations of contig_1579163 (3797 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_1579163

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18084 1 533 bp MLOC_18084.1 Available Available None
MLOC_18083 5 1159 bp MLOC_18083.3 Available Available LOC_Os06g28060.3, FRAME:+2, EVALUE:2e-51, 13106.m10544 protein ATP-binding region, ATPase-like domain containing protein, expressed





CDS Structure of MLOC_18084






CDS Structure of MLOC_18083






Contig Sequence (3797 bp)

>contig_1579163 3797 assembly3_WGSMorex_rbca.fasta
AAATAAGTGACTCAAAAAAGACTCAACTTTGTACTAAAGTTAGTGCAAAGTTGACTCACT
TTTGAGTCACTTATTTTGGGACGGAGGGAGTAGTATATTATATTATTTTAATCTATTAGT
TTCTTTGTTCAGCCTTTTTGGGCTGCAGGCTCTGAGAGAGGTCGAGGCAGAGGCATTGCT
GGTATGGATTCCTATTGCAGTTTTTAGTTTGTTGCTGGCTTTCGCTATAATTTCATTACC
AGAGTATTTTTGGTGTTGAATAAAAACATTATTTCCTAGGGGTTTTGGAGGCGAACTTTA
TACGACCTACACATGATAAGCAAGATTTTGAGAAGACGGAACTTTTTCAGAGACTTGAGA
CGAGATTAAAAGACATGACAATGGAGTACTGGTAAGTTCAATGTGTCATATATGGGACTG
AAAGTGCTTACAGCTGCATTCCCAGCCTTTGGTCATTTACAGATATATTTACATTACATT
CACCTTCCAGCCAGATGCACACTTCCCTGTTCTTTTACTGCATGCATGCTCTGATATCTT
CTTGTCATTCTTATATATGTACCGTTATTTCTTGGTAAAAAGATGACTAGCATAACCGTC
ATCTATTTGTCGCAGGAAGCACCATGCTCATCTGATTGGCTACCGGCAAATCACAAAATC
TCCTCCAGCATATTATGCATCTATTGCTGCTACCCATGACAATACCCCAGTAGCCCAAGC
TGCGGCAACAATTTATGTCAGGAACTCAAGAGCCAAAGCATCTGGAGTGTTGGACTCCCA
TTTCAATGGAGGTAACTCATTAAATCCTTTGCATGTTGGTGCCTTGAGGGATCAAATGGA
CTATGGTATATGCTCTTTAGCAAGGAGAAATATGAGGACTTCACTTTATATGCCAAGCAC
ACCTCAGCAAACTGGTTGGTTTCAGATATCTTCCGTCCCTTCGATGAATCCCCTTAATAT
TTTTCTGATTAGTGTACTGAAAACAGAACCATGCAAAAGAAGAAACTCTGGCTCGATGAT
TGAAACGAGGGCTCAAAAAAGGCACAACACGAATGGCAATGCTGACCACCTTGGAAGTGT
CAATGTTGTTGAGGTTAGAAATCTGTTAGGAGTACTTTTAGGTAATCAATATTTTTAACT
TTTTGATTCATTTTTGTAGTTTGGAGATGAAAGAAGCAGAGTCTTAATTTGTCAGAAGAT
GGTGCTAAAGGCCGAGTGAGTAATGCAATCTTTCTTAGCATTTTTTAAGCTTTTACATAT
AAACATGGTAAGCAAACAGTTTGCTATCATTAGCAGGTTTATCATACAAATTAATCTATA
ACTCCCTAAGCATGAGATGTGAAACCAAATTTATCATTAAGTAACATAATCACAATAATA
AGCATGACCTGGAAAGGTAACATAACAGACACTTGCTATTTGTCATTGGGAAACAACGTG
GGACGCTTGGGAATGAAAAAATGACTGGATTTACTGGCCCGTGATTTGAATGGACTACTT
GTGAGATTCCTTAAGGCATGGATAAATTCAATAGGGCAAGCCAAACTTTGTAGACAAACC
AAATAACAGCATAAATTGCTAAGGCGTAGGCATAGTTTCGTAAAGTAGGGTATAATCAAA
CACGCATGCTTAAATTGTCTACCATTGAGTTTTAGCATTGCTTCTTAGTTGATCCTTGTG
TTCGATGGCTGTTTAGAGCATTGAGTGACCACACACAGAATGACAGAAGTGATTAGTCTG
GTCAACTGACACAAAAAGTTGATATTTGATGCAAAGGGGTTTGATCATTTGTTGATTATT
GCTTAGTAGTGTTGGATATTAGTGCTCTATAATAGTAATTATCTCTATTTAGGTAACTTA
TGGTCGCGGCATCTCATCTATTCATCCGTATAATAACAGTGACAAGTTGATAGCTACCTT
GAGTATATGTCTAAACTGTATGACTTGGACGTAGATAACTAAACCGAGCTTGGTAGCAGA
TTATAGGAACCAAAAGTACAGTTCATTGTTATACACTGGGTGAGTTGAAGCTTGTAAATC
TGGATTCGTTTTTCTTGATGCATGTGACCTGCGCTTTTCTTTCTAGGATGATGTATATTC
ACATACTTCTGTGGCAGTAGCCAGTAGTTTGCTCCATTTAGTTTCAGCAATGTTCTGCAC
GATAAAGTGTAATTAAGGGCTGATTGTTTGATTGACTGGACGTGGATTGTGGACTGTAGA
GGCACCTTTTCTAATACGTACTCCCTCCCTAAGGAAATATAAGAGCGTTCAGATCACTAC
TTATATTTCTTTACGGAGGGAATAGTTTGTATCACAGAGATAGTAGAAATTAAAACAAAT
ATGTCATCCCTGCAATTTGCTTTTTGGTGGGTCCATGCACTTTCTTTAGATTCACAAGGT
AAAATAGTTTGTTATTACTTCTTTTATATTGTTTGTAAATCATGTGTAATGATTGTTACC
AAAAAAATGACGTGAAGGTGTTCCGAGCTCGAGGCGGCAGCGCAGAATCTCCAAAGCAAG
GTAAGTTGCTGGTAAAATGCACTTTTTATATACTTTTTGCGGGGAGGTAAAATGTGTTGT
GTTATCTAGAAGTAAAAAAAGAAAAATTAGCTAGTGGATGGCTCTGGTGTTTTTAATGTC
GGAAATGGAGGCACCTGATCTCTTATAGTAGATTCCCAAAGGCTGACGTGCTCAATCGCC
ACTGAACAGGCGGACAGGCTGAGGGGTGAACTCCGCGAGTGGCAACGGAGGCAGAGGAGC
CTGACGGACGAGCTGGAGTTCTACGACGGCCTCAGCGCGATACGGAGCAGGATCCCCAGG
GCCAGCACCTCCTCCATGGGAGTGGGATGGATCTGATCTGAACGGCATGACTGACAGACA
CCACACCTGTAGCGGAAGTCCATATAACTACGTATAGGTACTAATAGTAGTAGTACTAAC
TTATGCGGCGGTTTGACGTCCCGGGATGGTAGAACCGCAGCAAGTAGATCTATGGTTTGG
CACTGGGTGTGCATGGTGGTAACATCGGACGTTTGATGTAGTAGGAACAAGACCTCCTTC
ACGGTAGCCGGTAGCGGTGGCAGGCCAATATACATAACTTAAAAACAAACAACCCTCCCT
CTAAGGGCATGTACAACAGTACCGACGCCTCCTATCTATAGTATACATACACATCACCTA
TAGACACCGTGAAAGAAAAAACGTACAACGGGACATCAGGTGTAAACGCTTCAACTGCTA
GTAAATATTAGACCCACAAATATGCAATCCATCAGCCCATGCACACGACCGACTCATACA
ATGGAAAAACAGACGTCTATAAGCAGCGATTTACCTAGGAGTAGACCGTCGGTAATTCTA
CAGGCTCCAGTGTTTCCCTCTTTCTCCCTCTTCCACGTCACTTATTTCCTCTTCCACGTC
ACTTATTTTCATACATGGCATGTATTACAGACGGCTGACTAGATGCCTTTGTACATGCCC
TAAATATGATGGTGCTACTGTAAACTGTAGCGTGCACATGAATCGACTGGTTAAATTGTT
TGGAGGAACTGAAAAAGGAAACGAAATGGGAGGCTGTTTCGTTTTTTCGATGGAGGTTTT
GGCACAGTGCTCAAGAAATCTCCGCAGGCTTAGGATGGTTGTAATGGGTAGTATCATATA
CTAGGACCATGCACATGATACTAGTGTATGATACCACATCTGTAATGTATAATATCATAT
GTTAGTATCATAGGATAGTTTATTTATTGACATGCAAGACACATAGTAGCACATCATTTA
ATATGGTACGGTATCAT