Contig Data
morexGenes
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Map Locations of contig_1579154 (4253 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1579154

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18081 1 936 bp MLOC_18081.1 Available Available LOC_Os10g18340.1, FRAME:-2, EVALUE:3e-23, 13110.m01505 protein expressed protein





CDS Structure of MLOC_18081






Contig Sequence (4253 bp)

>contig_1579154 4253 assembly3_WGSMorex_rbca.fasta
TATATTTAAAAAGGGAGGGAGTAGATTACAACCGAGATCCTGCAAGCAGGATGCCTCTAG
CTAGCACAACCGGATTATTGATCATCATACAGACATCCATAACTTAAGAAACTTTACAGA
ACCAAATATCAGCAGCTAATAATATAATTAAGCGCAACCACGACGTTATTATTTTATACA
GTAATAAAATACAAAAAAGGAACGCAGCGCACGAACTTAGCAAGAGCTACATGCATGTAG
TAGAAGCAGAAACCCGACTTCTACTTCATGAACCCCTGAGCCATCTTCATGAAGCCGCCG
CCGCCGCTCTCCTTCTCCTCCCCGTCACCCTTCTTCCCTGATAGCGATGCAGCCCCCTTC
ATGACGTCGTCGAGACCGAACCCGTCGGACGATTTCTCTTCCTCCACGGCGGGTGCAGGT
GCAGGCGCAGGCGCTGGCTCCTTGGGTGCATCCGGCTTCGGTGCGTCAGCGGCAGCAGGT
GCATCAGTCTTCTCTGCACCGCCGGAGCTGTACTGTTTCAGGTACTCCTCGGCCTTCTCG
AGGTACTGGCCCACCGGCTTGTCCTCTAGCTTGCCGTACTTGGCGGCGGAGTCCAGGATA
TCGGCGGAGGCGGCGGCTACCTTTTCCTTGTCGATGCCCTCGACGCTCTTCTTCTCGTAG
GCTGTCCTGGCGGCCTCCGCGACCAGCTTGCTGCTGGACATCAGGTCCCCGGACGAGTTC
TTCTCACCCTCCATTCAAGCTTAGGTGCTGGTAGCAACAATCTTTTGTCGCTTAAGAGTG
GTGAGGCTAGTAGCAGAGGGAGTGAAGAGGATAGATGGTAGGGGTTCGATTTTATAGGTG
GAGGAAGGTGTGGATGGGATCGGCGACAAGAGGGAAAGCTACTTGTGTGGTTGAGTTTGG
TAGTGGAGAAGAAAATATCTTCGGATATAATAAGACAGACAGGGGAAGAGAAAATTGTAA
TGTAAAATAGTAGCACACTTCAATCTCTATTTGAGTGTTGTAGAAAAATAGAAGTTTTTG
TATTAGACAGACTAACCTTGTTCAGTTTTTTTGTGTAGGATAACAATCATTTTTGTGTAG
GATAAGAATGAACGTAGTCTTTCTAATCCATGGTTATTACTAAGAGCTTTGAGTGGATAC
AAATTATTTTAAAATCGTTTAGTGTAAAGTGCTGCCTGAGAATTCCTATGAAACTTACTT
CTACTAATCAGACGAATAACACAGAAAAATTTCTTATGATTTTGATCCTCCAAATTTCTA
TAACAATCCTTCGTAAAGGTACTTGAACTAAGAGCAGGCTGACAGTGTTAATGTCTATCT
GTCCCTTTTTTTTAGTGCTTGACCGTGAAGAACCGCAGTCACGAAATGAACTTTGTTCGC
ACAAATCTCAGCGGGTTACCTCTTTAAGATAAAGTGGCAGATATGGAATCAGCTAAAGCT
CTTGTGGTCACAATCGCAAGTGGATTTATGCAAAAAAGAAAAATGAAAGAAAGCACTAGC
CAATAACGTGGAGATACGTGTCCTTCCTCTGAATGTGATAATTACCTGCTGAACAGGGAA
CCCCAGATGTCGACTGTCGGCAATGGCAGCACCGACGCTTGCTAACGGCTGAAACGGGTG
ACACGTATTCTGGGTACCCCCGCCACGGAAAATGTCGTATAAGTGTATCAGGTGTCACTC
TTACTTCCAAATTATAAAAATTCAAATTAAAATATTCAGAAAATAATCGCGAATGTTCAC
CACACATGTGTACGCAGCTCTTCAGAAATACAGATCCAAACTCAAAGCATAGGGTTGTGG
ACAAATGTCTAGTGAACACAAATAATTTATTTTCAGATTTTTGAAACATCTATTCAGAAA
AATTATAACGGTAGGTCCGAACAAATAAAGGAAGAACACTCGAGGCATCTTCAAGTAGAC
CCTCAAAACGCCCACATACGTTTGAACCGTGTAGTTTGCCATTCAACACACATGCATTTG
TGCGTGGATGCGTTCGTTTGTCTAATTTTTTGTAAACCGATCACAAAATTGGGGAGCTTT
GTGGTATTCTGAACCGCAATGACGTGGGACTCCGACACCCCCGATCCACTCGAATTCTCA
TCTCGGGTCACTTTTCTTTCACTCGACCCCAACTCCCTCTTGCAGTGCATCCTCATCCTC
CTCCTCCTCCGGCATCGTCTTTGTACTTCTCCGGCTGTCGCCCAGGCATTGCGAGACGTG
TGCATCCCCACCCACGCGCAAATAGACACATATTTTTTGTTTTTTGCTTGTTTGAGTCGT
TCGAGCGGACAAATGTGTTCGATTGTGGCCTTGGGCCATCGGGGCGCCCAAATGTGGCCA
AAGCATTTGGCCGACGCCACAACTTACAAACAACTCAATAGGCATAAATTTTTTAAAATA
AAACATGCATATTGGAATGCTGGTCGAAGCCCACTTAATAATTAATTAAAACAAAAAATA
TTTAAACTAAAAATACCACTCTCATGCGCTCGGTGCCCCAGCCCGCAGCCCTAGGCATCA
TCGTCGTCATGCTTGCCCTCCATGGTTAGGTCGACGTACTCAGCAACGCCGCCCATGGGA
AAGCATGCTGGTAGGCTGCCAGTGTCGTTTGCTGACGCGGTGGCGGTGGCGGCGTTGCGT
GACACTGCATCTTTTCCTCCTGCGCGCGCCGCTCGGCCTCCTCCTTGCACAATGATTGCA
TCGGATGCTCCAAGTCTGCCCAATTTGATACCACCGCGCGGCCCTCCCACTGCGCAAGGT
ACTATCGCTCCCCATCCTCCATCACGCATAGCCAAACTGGCGACCTAGAGATATACCTGG
GCACAACGCCCACCCATTGATACGTCTCGAGCATGGGCGCGGGTGCGGACGATGGCGGTG
GTGATGAAGGTCGTAGTGGATAGACGTTCTCACCGGCCACCGAATGCTGCAACGCCTCCT
TGAGGCTAGGTCACCGAGCATCCTTCACACACTTGGACTCCTCGATGGCGCGCTGGATCG
CCTCCTCCAGTGCCGCTTGGTAGGCCACCTCTTTGTCGTCCTCCTTCTCCATCGACGATG
GCGATGGGGGCGATCGTCGATCTAGACGACGCCACGACGGCTCATGGCGTGCTCAACCGT
GAATTAGATGTCCCAATTCAGGGAGTCGAGCATGTATGCAGGGTCGCGGTGTTGCTCCGG
CACGATAAGAGCATGGAGGTTGCAGATCTCTACTGCACGTACATGCCCAGACTGCAGCAC
GACCGTCACCGGAATCTAATGGCTGTCGAGATGCCAACTGTGTAGAAGGTTGATGTTCAG
CCATGACAATTGGACACAGTACTCCCATTGGTACTAAGCACAATGCACCGAAATGTAGAG
TCGGTAGCATGGTCATCGCCCCCATCCCGACGCCAGCGTTAAATTGGCCGGGCTACGTGA
AGATCGAGCCTCATGGTCATGCTTGTGGATGACGAAGCCCATGGCGACGACAGAGGCTAG
GGTTTGTGTCGGCCAGAAAGGGAGCACGCATGGCCATTTAAAAGAACGTGGACTGGATTC
TTCGTGTCGGTGACAAGCGGGCCTAAGATGGTTGGTTTGCATTCACAATGATTGGGCATT
GGTTGGTAGTCCAACATGCGAGTTAGAACGGACACAAAGATGACATGTGTTCTCTTTGTG
GATGCAAATCGGCCGCAAATTTGATCCTGATATTTGTCGAGACGGTCATTGAGCGGACCA
CATTTGTGGATGCGTCAACATGTTGAGACGTCGCTTCTGTCCATTTCGGCATATACGGAC
ATGTGCAGATCAAATGCATCAGCGCGTTGGAGTTGGCTTGAATGTTGGTTGTCTGGTTCT
ATGTTTTGAAATGCTTTCGTGTCTCAAAGATGATCTCCGTTAGACCCTATATATTCCCTT
TATTTATCCACGTGGACACTCTGGATAACCCAACATTTATAAATCCTTTACTCAAGTTGA
GACTTCTCGACCTCGTCCAAGTTAACCCTTCAAATCGAGCCTAAATGTTCACGATCGTTC
AACGCCCCTCAAATTCAGCTCATATCTGTAGCTGATTTGGGCGGCTCACACATGCGCAGA
CACGTCCACCATGTTACGAATAAATCCGAGGTACGTAGTCGATCCACCGAGGGACAAACA
ATCACAGCACAATAACGAGACCGAGATTTGTTAACGAGGTTCGGCGAACTCGCCTACTCC
CCGGGGCAATGACTACGGGCGCTCCTCCCCGAGATACCGCAACACCGGCCACC