Contig Data
morexGenes
Links



Map Locations of contig_1578987 (4265 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1578987

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_18031 2 3084 bp MLOC_18031.1 Available Available LOC_Os05g49840.1, FRAME:+3, EVALUE:0.0, 13105.m05338 protein phospholipase, putative, expressed





CDS Structure of MLOC_18031






Contig Sequence (4265 bp)

>contig_1578987 4265 assembly3_WGSMorex_rbca.fasta
CCCCGCGCTAAGCCAGCCGAAGCGCGCGCGGCAAACACATTTTTTGGGCACGGCGCGAAG
CGCGGCTGTTGGAGATGCTCTAAGCTTCTAGAGTTTTTCTTTGTATCACTTGGTTGATAT
GGTTGGTGAATAGTTGTAATTCCAGACCGGTTAATGGCTTTTGTTAATTCAAAGTCATGT
TCCCACGAGCCTATAGTTCTAAAGAAAACTGTATTAAGAGTGTACTTAAGTCCTTTTCAG
TGAAAACTGTTCTAAAATAATCCTCCCGAGTCCCTACCCCATAATGCCCCGTAGGTGCAG
CAAAGCTCCGATCCGTCCTATAAGTACAAGCCCAAGCTGAAGCAAAGGTCACAACACCAG
CTAGCCAACAGAGCCAAACTTTACTCGCCGGCAGTGGTAGGCAGCACATCGATCGAGAAG
ATCCCACGAATTAACACCTCGCGCGCCATGTCGTTCCTCCCGATCCCACTGCCAATCGTT
GGAGACATAGCCAGCAGGCTGCATGGCCAAGAGAAACCCCGTGGCGACGACACGACGCCG
CCGGCGCCGGCGCGCGTCCTCGGAACCGTGGCCAGCAGGTGGCGCGAGCTCCACGGCGAG
AACTCGTGGGATGGGCTCCTGGACCCTCTGGACCCGCACCTCCGCTCCAGCATCATCTCC
TACGGCGAGATGGTGCAGGCCGCCTACGACGGGTTCAACACCGAGAGGCGCTCCCCGCAC
TGCGGCGCGTGCTTCTACGCCTACGAGGACCTGCTCGCCGGCGTCGGGGTGCCCCACCAC
GGCAACAACTACCAGGTCACCAAGTTCATCTACGCCACCTCGTCGCTGCCGCTCCCCAGC
TCGTTCCTGCTGCTGCCGCTGCCGTCGCTGCCGGACGTCTGGAGCCGGGAGTCCAACTGG
ATGGGGTACGTGGCCGTGGCCACGGACGAGGGCGCCGCCAAGCTCGGGAGGCGCGACATC
GTCGTGGCGTGGCGCGGCACCGTCCAGAACATGGAGTGGGTCAACGACCTCGACTTCGTT
CCCGTGCCCGCCGCGCCCGTGCTGGGCTCCGCGGCCAGCCAGAACCGCCTCGCCGTCGTG
CACCATGGGTTCCTCTCCATGTACACGTCAAGCAACAAGAGCTCCGAGTTCACCAAGACC
AGCGCCAGAGATCAGGTAACTAACGTGCCACAGTGACTCATAAATGTGTGTTTTGGTACG
TCAGGTCGATCTCACCGGCCCATTATACTTGTGCAGTTCTAACGTACAAAACGACAACAG
CTTATATACCTATATACTCCATCCATCCTAAAATAAGTGTCTCAACTTTATACTAGCTCT
AGTATAAAATTACACTAAGCTTTAGACAGTTATTTTGAAACAGAGGAAGTAATAATCTAA
ACAACGACTATAATGAGAAGCAAGGCCACGGTCTAGCTAGCCACAGCAAAACCAGCGTAA
CTAAATACTGTTAACCTGATTTTTTTGTTAATTTATCTCACTACTACTCCTACTAGAGAT
TTTACTTAAAAGAGACGGATTCCTTATTCTAATTTAGATGAGACATAGTAAAATGTGAAA
ATGTGCCAGAAAAAGTAAAACACGGTGGGTAATCATCAGACAAAAGACCCTCGGAGAATC
ATTAGTTGATTATTAACAGTGCCGAACTGTACATATAGTCCTTGCATAAAAGATTCACCG
TGCCGGTTATATATTAACACAGCCCTAGCGCCTGTGTTGTATGATTGGTATGCAGAAATC
ATGCACGTACGTAGCAAGATTGTCTTCCACTCGACTCGATTAGTGAAATTCCTTGTGGTC
CCCACGGAAAAGAAAGAGAAAAGGGAATCCTTTGGATGTTCCCGCAAAGAAAATGATTCC
ACGAGTGGAAGATATACAAGTTAAATCTTGAAGACAAGGAAACAATGGCCTTATCTAGAG
GCTCTAGTCCTCAACTATCGTTGGCTCCTGTCCTTTTCTTTCGTCAGTATCCTCAGTGTA
TGAGCGCGTCACATGATTGAGCCCTTAGAAAATGGCACGGTAGCAAATGAACACGACGTC
GTCTGTACTTATTGAGATGTATGAATAAAAGGTGTTGTGATGCGACGGAGCCAGACTCAG
TTTTGACAAACTCGTGGGCACCCGTGTTAATATTCGTTACTATGTAAATAGTACTAGTAA
TAAATTTACGCATCAACGAAAGCGATGCCCGCCCTGCTGGTTGTTGAGACTTGAGAGCCT
ACATCTATGCCAGAAAAGACATACGTACCCTATATTTCAGAGCCGGCTAAAAATCATCAT
TTCTATGCCGACAAATGCTTTATTAAACAGTACTCCAGTAATTGCACATTTAATTAGTTG
ATCATTAATTAACCATGCATGTAAACACACATGCAGGTCGTCAAGGAGGTGAAGAGGCTG
GTGGAGCTGTACAAGGACGAGGAGGTCAGCATCACCGTGTGCGGCCACAGCCTCGGCGCG
TCGATCGCCACCCTGAACGCCGTTGACATGGTGTCTAGCGGCATCAACAAGCCCGAAGGC
GCCACCAAATCCTTCCCCGTGACAGCCATCGTGTTCGCGAGCCCCCACGTCGGGTGCCGC
TTCTTCAGGTCGGCGTTCCACTCGTTTCCAGACCTCAAGGCGCTGCATGTGCAGAACGTT
GGCGACGTCGTGCCCCTGTACCCACCTCTGGGGTACGTGGACGTGGCCGTGCAGCTGACC
ATAACGACAATCCGGTCGCCGTACCTGCGTGTGCCGGCCACGGTGGGGACGCTCCACAAC
CTCGAGTGCTACCTGCACGGGGTGGCCGGGGAGCAGGGCAGTGCCGGAGGGTTCAAGCTC
GAGGTGGACCGTGACATAGCGCTGGTGAACAAGGGTGCCGATGCGCTCGCGGACGAGCAC
CCGGTGCCGGCGAGCTGGTGGGTGCCGAAGCACAAGTTCATGGTCAAGGGGGGAGATGGG
CGATGGACGCTCCAGGACTTCAAGCACATCTAAGTTAAGTTACTCGCATCGGCCATTCAC
TAGGAGGAGAGTGGGCGTTGATGTGATTCACGGCGCTGTGCTCGTTGCCAAGACCGAGGT
TCTAAATAACGGCTTACGGTTTGTCGACCGTTCCTAGTATATTTCCCATTTTATGCAAAA
TAAGTGAATGTTTCCAACAATATACACTATGCATGAGCGACACATGAATATGATGGAAAC
ACTTCTCCTCGACAGTTCTTTTGGCATTCTTCATGCATAATTTGTGGACCATATCCTTTG
TATGTTTGATTTGAGAGATGAAGGTGTTTTCATTTTTTTGCTTGATTTGAAGCCTGAGAA
GTACTTCGGCTCATCCATTGTGCACATTTTAAAATTACTTCCCGTGAGTTTATCAAACCC
TGCCCTACAAGTGGGGTTAGTTTATCCAAAGGTAATATCATCAAGGTATATTTGATCCAC
AAAAAAATCACTATTAGTTTTTTTAATGAGGAAGGACGGGTCAATTTTAGCAATTTGAAA
ATCATGTTTAACGATGAATCTGTCCAAGCACTTGTACCATTTTCTTACTAGGGACTTCTT
TGAGACCATAAAGAACCCATTTTACTATTTCAAGAATCACTCTTAACATCTATTTAACAG
AGTTATATCATGGTGACTAACGTAAACTAAAATAATACCTTTAAGGAGTGACACGAGGGC
ATAGTTCGTTGACGAGGGAATGCCCACCACCCCACTTGGGAGGCCCACGATGACATACGG
CCTAACTAACGGCCCATGCCCATGAACATGTCCATGGGACAGGGGGGGGGTATCTTCTAG
TCGGTGGCCGGCCTCCAATCGAGCATCTTCTCCTCCAATCACGCGAGGATTCCAGCAGTT
TCAGCTAGGCTAACTGCCAGTCGGGTAACGAGGGTGTCGTCCATGATCTCCGCTACACAT
ACAGTACATATATTATCAAACGATGGTATATCATGTTAATAGCAGTCCTTATTTATTTAT
GGCTAGAAACAATCGATCGTTCATGGACCACTATTATCAGTTTTAATACCAAACCATTGT
GGAATTCTAATAAGCTAGGGGTGCACTGGGTTGAGGGTTCACCATTGTTCTAAGTCATAC
ATGTAAGAGCTTGAACACCTCACAGGAGTACGGTATTAACTCCATATCCTAGGGTTGTCC
AATTCCTTGTTCGTACTCCCATATACGTCATCTGATAGTCACTATGCTTCTCCGTGCACA
CTCATAAACGCATTGTCCTTGAAATAACTGTTGGAAATGTGCACTAGAGGCAATAATAAA
ATGGT