Contig Data
morexGenes
Links



Map Locations of contig_1578850 (4234 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1578850

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17998 2 2142 bp AK364917 Available Available None





CDS Structure of MLOC_17998






Contig Sequence (4234 bp)

>contig_1578850 4234 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGCTCGCAGGTGGACATAAGCACACCAATAAATGTATGTTTGGAAAATATGG
GTTAAATTTAGCCATATGATTATCTAGAAGTTATTTATGCATTAATAATCTCTCAGTGGA
GCTGGCCTAGAGAAGTTGAATCCGAATATCCAGCAAGGGTTTTAAAGATTGAATGTGACT
TAGAAAATCAGTCATTGTTCTTTCTCTATATTAAATTAAACTAGAGAATGATACCTAGAC
TGAACAATTCAAATAAAACATAAATTAGATCTCTACATCTCATCACATATAATTACTATT
ACTAAGTTACTATACCTTATCACATCACATAACAGAGATTAGGAGTACATATACCTTGAG
AAATTGATGTCAGTCGGCAGTACAGGCGAGCGCAAACCGACAGCGGCGATCGGCATTATC
ACGCATTGTCCAATTGAAACAAGCAGAGAAAGATACTCCCTCTGTAAACTTTTATAAGAT
GTTTTAGATCAATACTTTAGATTATCCAAACATGGAGAATTTGACCTAAGAGGCCTCCTC
ACGTAGCTGTATATACTTTGCATTCATGGACTACGTTCTGTACTCAACAGTTAAGCACCC
ATTTTAATAGATAGAAGTGAGGCTTGAACCCTACCTGACTAGCCCACCGCCTCATGGTGT
TAGCCACCCAGGGTCTTTGGGTCTTTCTCGTGTATTTCTAACTTCCATGTTACAGATACT
CAACGGCAGCAATCTAACTTTTTCCTACACAACAATGGCATGCCAAAAAGCATTTGGAGT
GCAGAATTATTATTTTCCCCTACTGGCATGTAATCTCAACCCCTACAAATACCCAACATG
GGATATCGACACAAAAATCAAGAGAGACAAATAGATCAAACACTGAACTACCTAGGCTAG
AGTCAGAATGGCTTGGAGTCGGAGGTACTGGTCTTGCTTCACGGATTGATGTTGCATTCC
CGCAGAAAAGGCTGATCATAGTCAAGGTACTTTGACCAGTAGCTTCGGAACTTGGGGAGG
CCAATCTCAAGCCAGGGCTTCAGGTTGCCATTGTAATGTATGACTGCGGCACGCTCCAGG
TCTCTACTGCTTACATGTGGGTTGTAACCTAGACCGAGAACATGCCATGATCGATCGAGG
GGGAATGTCTTGTTCCAGAATGTAACCAGACCTGGAGGGAGAGTGCCAAGTTTCCATAGC
AGTCCGTCCTCGTTCTGCAATCAAAAGTTGACAAATGTTTATCAAACGGAATGCAAAAGA
AAATAACAAATGACAGGTTTTCTGAAAGAAAACAAAGGATGGAGTTAAAAGCTTCTAAGT
CATTGACAATTCATAAGGATTATATAGTTCTCTGATTCTCGCATCTTCTGCACAGTTCCC
TGTAAAATAGATGTGTTGAGAGATTTTCCTATATCTTGCCACCCATGTAAGCTGAAAATT
AAATGTGTTCATTACATGAAAAATCTGCAACATAACATGGAGAACCTTATAGGGGAATAC
GAATAAACTCATCATCTCACATGATCTTTAGTTCAAAACTTTATCAGCCTATTTAGGCAT
AGAAGCCATATTATCCCAAAGCTAGTTCTAGACATCTCGAGTAATTTATCATGTATGAAA
GTAATCACAAGCATGTAAAACTTACAAGCTTCTGCCAAAAGTGGTAGAGTTCAGTTATGT
TCTGCCGCCTCCATTCAGCCAGATCAAACACGTTCATTCCAAAAGCCCAGCCACATGCAT
CGGGGTCAAAATTCTTTGCAATAACAGGACTTGAGAAATTCAAGTAACGGCCAAAGCGAT
GGAAGCTCTCTCCACAAGTCTCTACAGCACCATTAACCTTCCCCTTCATATCGATTGACC
AGAGGCCAGTTATGTCCTTTCTTACTACTACATCGCCATCAAGAAAGACCATCTTGTCGA
GCTTTGGATAAATCTCAGGCAAGTAGAATCTCAGATGATTAAGCATTGAAAGATACTTTG
GGTTTCTGTACTTCAAATCTGAATCTGAATTTGCACGTTGTGCCCTAAAGTAATAATCGA
TCATAGATTGAGATCCCAATTGTTTCAGCACCAGGCTGGAGCTGTCATTTAACCATGTGA
ACTCATCAATATTTTGTACTTCAATTGTTGCTTTTCCAGGAGGATTAGAGAGGAACCACA
TTCTCATTGGAGCGTAATTTAGTCTGTCAGTTACTATGTGGAAAACATGATGGGAAGGAT
GCTGCAGACAAAAAATTCCACTCGGTATGTTGCATGTTATCAATCAGGGTAACTCAAGTT
GGAAGTATCAAGAATACATACCTTGGCATTTAACACTGTCGAATTAACAACAACTGCTGT
TGCCAATATATTATCTGAGAATAAGGCATAGTGATACAGTTTGGGATCATCAAGTTTCTC
ATGGTTTGGGAATTGCTGCTGACTAGGATCCAATGAAAAGTATTCATTAGCTAGCCTCAA
GGGGAGGCAGTGAAGACCTTTGGGAAGGGTTTTGGCTGCAAGTTGTGTTAGAAAAACAGT
TTGCTTCTTTTGTGCATGCAGCTGCTCCTCTGCTGAGTGAAGCATAGCCCGGAGCTTTTT
GACAGCAACAGAGCAATCATCCTGTGTCTGTTTGCCCTTGACCAATGTCTGCTCAAGTGC
TTTCACCTTCTCATTGGCACTGAATAAGTAAACATAAATTAAAGATCACTGAATAAATGT
GTGAGGCTGTAAATGCCCACAATATGTTAACACTTTAAAAATCATGAACATTTGGCAGAC
CCATACTTCTTTGGTAGATCAGAGTCCTTGGATGCATCACCAAGCACCTTTTGAACTTCC
CGTATCCGCTGTCGCAAATCCCTGAGGTATTGAGGATTTGCTCGAATGGCTCCAAGACCA
AGGTAGACCTTTGCCTTGATTAACTGATCCCTGATATCCCGGACCCTGGTATCAGACAAA
GGCATATTTCTACTCCTACCATCTGTGTTTTCTTTTTGAGGGTTCTTTCCTCCCTCCAAG
GATCTTCCCTGCAAATACAAGCCCACAAAATTCAGATGAAGCTATGTGGCAACAAATCAT
GACTGCAACCTATCGCATTAAGATGTAATAAAAAACCAATGATGTGAACTTTCTTCAGAG
TAAAATGGAAATGCCTAAATTCAGCAGAGAGCTAAGTTAAGTAATGTATGAAAAGTAGAA
CACATTGACCAAACAAAATGCACTAGACGCCAGTGCAGCAAAGTGTTACAAGTGTCTGTG
AACCATGAGTTTGTTGGCTCATTTCCTAGGAGTATCACTTGCCTACAATGTGGTAATCAA
AACTGCAGGGATGCTTCGTGGTATCATCAAAACGAGTGGCCCCGAACGCATACCGGGCGC
TCGTGTCAGACCGTCCGATGTAGAGACTATTGCCCACGGAAAAGGCCGCTTGGACCGTCC
GAGCCAAATCGCCAGATCGTCTAGGGCCCAACCCAAGTGACCAAGGACGCCACCCAGATG
ACACCCTGGACTATGCGGCGCTAGGAGCAACTTCTCTCTGAAGACCGAATTGGCGCAAGC
TCAAGCCCTGGACAGGCTCAATGGATCAGGCATCACTCTGAGGCAGTCGGCCACGGTAGA
TGAATGGTGGGCCCAACGTGTTCTGGAAAGACCCTTGTAGTGTATCTATTCATTAAATTT
GACTCTTCGAAGTTGTTGTATATGTATGTTCTTGTGGATCTGTATTGAAACTGTGTTGTG
ATACTTCCTTTCCACCGACATGGCATACACGTTGCAACATGTGAAGGTGGACTCCTAGGA
TCGATATTACGTGGATGCTAGTGGATGTGCTGGATCTGCATAGTACCGGTGCCAGGGCGC
TACAAAGAGATTAAAAAACCACAAGTGACAACTCAACTAAATTTGCCAGTATCCACCTAA
AGCCTGAGAAGTAACATGTATCAACCTCAGAAGAAGACTGCTGCTGGGATTCTGTGTGCT
TCTCCTGCTGATCCATTGAGCCCGTCGCCAAACCACCATCCTGTGCCTTCCGCCCTGTCA
CTTGGTCGATCAGTTCTCCACCCTTCAATACGGCACCATCACCAGAAGTGATCTCAGAAA
GTACCCTGTTAGCCTTCTTCCCGGGTAGCAATTCTACAAACAGTTCATGTGCAAACCGTC
TAAGGACACGAGCTCGCAACACCTAAATCTTTACAGTACAGTGTAACATTTACCAAAACC
GCAAATAAAATGCACACCTTGGTTCGTGGACTCA