Contig Data
morexGenes
Links



Map Locations of contig_1578435 (3645 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1578435

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17888 3 1608 bp AK369800 Available Available None





CDS Structure of MLOC_17888






Contig Sequence (3645 bp)

>contig_1578435 3645 assembly3_WGSMorex_rbca.fasta
CCAAGCCAGCGCCCCGCCCGCCGCTCCGCGCGCGGGGCCGCCCCGGGCGCTCGGGGGGGG
CCGCGACGCCGTCCCCCCCGCCATCGCCGGCGCCGTCTTCTCCATCGAGGTCGCTGAGTC
GTCGCGGGACCTCTGGCACACCAGCGACTCCGCCGTCTGGAGCGTCCTCTTCATGGTACG
TATATCACTGCATTGCCACCTACCCTTCTCCATTATATACCCACGGAATGGAGCAGTTTC
TCGCACGATGCGACGCGATCGCCTCCGAGACGAGGCGAGTTTTGCAGAATTCAGAGCACT
CCGCTGCCCTGTTTCTGTAAACGCGATTGAATTTCATGGTATGCATGGGCTATGTTATTG
ATCATAATAAAAACATCAAAATGATGTCGACTCTCGACTCTCCGAATCGAATCTGTACTT
TGTTATTGACGAGGCTACCACTGTTCAGCATTTGTCAGTGACGCACGTCGAGGTACATGG
AGTTATGGAGAGTGGCTTATTACTGACCGTGTTTGTACTACTGTACGACGTGCAGGTGGA
CATCGTCCTCAGCCTGCTGAGCGGGAGGCTGGTCCGCGAGAAGGTGGGGCCGGCGGTGCA
GAGCGCCGTGCAGAGTCAGGTAGAGCCTCGACCTCAGCCCGAACGAAAATCATGGCGCAC
CATGCTTGATTTAAATACCAGTATTTAATAAGGCTCTTTACGACGCGCGAGTGATCAACC
ACTCCAATTAATTAACCAATCTCCCTCAGCATACATACTTACTCCACCATCATGAGGTGA
CTGTCACTCTGTCAGTGATAGCTCATATGCATTGTCTAGTGGAGTAGTATGTAGTAGTAC
AAGCTATTGCTATCTTCAGACACAAGGATTTCTTGTGAGGAAATCCATGCACAAGAGAAG
ACAGCAACCTAAAAAGGGCTTCTCTTTTGGTAACAAACATGGGTGGTTACAAAGGTGCTA
TCCTAGTGCAAATCTTGTAGATCACTCGCTGAGTCACACTCGCTATAAGTCGTAGTTATT
GGGGTGAGCTCATCACCCATAAGTGTTAAAAATATTGCATCGATGACGGCATGGTTAACT
AACACCGGTTTTACGCCCATTTTCTATTCCATGTGGATCACAACAAATTAGATCGTGTCA
CAAGGATAAGATTAAAAAAACATGTCAACACAGCTCAAAAAAACATACATAATGTCGATA
GCGTTTCACATTTTCACCGTCAGTGTCGGCATTACATAATTATTAACCACGCATACATTG
GCATGCAGATAAGCGCCATCAGCGCGCCGTTCACGGAGCCCAGTGACCTGTTCGAGACCG
GCGGCGCGAGGGGGCTGCCAGCGCACGCGCTCCGGCGGCTGCCGGCGATCAAGGTCGGCG
CGGACACGGCGGTGGACGAGGCCGGGGAGGCGCTCTGCTGCTCGGTGTGCCTGCAGGACC
TGGAGGTGGGCGAGTCCGCGAGGCGACTGCCCGGCTGCCGGCACGTCTTCCACGCGCCCT
GCATCGACCGCTGGCTCGTCAGGCACGCCTCCTGCCCGCTCTGCCGGCGAGACATCTGAG
CCCGGCAGGGCACCGTGGGTCCATCTTGTAATTAAAATCGCCATTGTTCACCGTGCGTCA
GGTGCCCGTAAGGGGACCGGCGGCAAAAGAAGCCACTTTGTGTAGCGATGCGTGAATGGA
TTGGGAATGTGAACTTGTGGATAAGAAACAAAGAATTTGTTCGGGGCTCATACGGCTGTC
GTTCTGATCTCAAGATTGTTTGCACGTTCTGATTTATTGCACGCACGCCGCGCGCACACG
AACTGCAAGACGACACGAGGAAAGCTTAAAATAAACACGCAATCTATATCTATCTCAACC
GACTCGCCGTTTCACAGACCGGTTTCTGAATACTGTGGGCTTTAGGCTGTTCATAGTGGA
GAGTAACATATAGTATTATCATGCATATGTTATGATTGTATGATACTATCTTCGTAGTGC
ATAGTAACATAAACTAGTATCATAGGTGATCTCATTNNNTGACATGCATGACACATAGTA
GCATTTAACATGTTACGGTATCTACCTATGTTACTCTAATCATCTCTTTTCTTTAATTAC
TTGTCACATCACCATGTTTGTTAGTCACAAGACTATGTTACTATCTATGATACCCCACTA
TGGCCAGCCTTAGAGCAACTCCAATCGAAACAAACAAACGTCCGTTTGGATCATCCGTCT
GCTTTAAAATTTAAGTCGATAATGGGTCCAACGCATCGATCCATATTTATCTGCATGGTC
AGGTAGTCGCCGAGTTTTAACAAATACAAACAATTTACATCTTTTTAAAAGCAAATGAAA
TAGCATAGTTCCACAACCGAAATAAAATATAGCAACGTTTTACAAGCCCAATAAAAATTA
AATTACCTTAAAAAGATACATCTGCCAACATGATTCCACATATGTTTAATCAAATCATCT
TGCAACTGAATTAGTTTTCCAATCACGCATTTTATGATGAAATTAGATGAACTGTGCAAA
CGATGTCGCTCCCCCGCCATGCTGAGGCACCATATTGTCACCTTGAAACTCAAACCCTTG
ATCGTGGAGACGTTCCGGGCGCTCATCATCTACGATCATATTATGCATGATCACACCAGC
ACTCATCACTTTTCGTAATTTTTTGGTGCTCCAAGTTCTAGCTGGATACCGAACTATACC
CCATCGAGATTGCAGAACACCAAAGACACGCTCGACATCCTTCCTTACACTCTCTTGCTC
TTGGACAAATCTTTTCCTCTTTTCTCCGACAGGGTTGGAGATTGTCTTCACAATAGTGGT
CCACTCTGGATAGATTCCGCCACCTAGATAGTATCCTTTGTTGTAGTTGTGACCGTTGAT
GTTAACATTGACCGATGGGCTGTTGCCTTCAACAAACCTTACAAACACCGGCGAACGTTG
AAGCACGTTGATATTATTGTGTGATCCGGCCATGCCAAAGAAAGAGTGTCAGATCCAGAG
ATCTTGAGAGGCCACTGCCTCAAGTATGATAGTGCAAGCCTTGACATGGCCTTTGTACTC
GCCTTGCCAAGCAAAAGGGTAGTTCTTCCACTCCCNNNNNATGCAGTCTATGCTGCCAAG
CATCCTTGGGCAACCCGGGTGGCATTGGTCACCAACAAGCGGGTTGTGTCTGCAGCAATC
AGCCCTCTCAAGTACTCAGGGCCAAACACTGCAACCACAGCCTTGCAGAATCTGTACAGC
GACTCTAGGCACGTAGACTCTCCTCGATAAGATCACCGGGTACTCCATAAGCACGCATCC
GAATAACTGCGGTGCCTTTCTGATAAGATGAGAACCCAATCCTCCCAATGGCATCCTCTT
TGCACTCGAAGTAGTCATCGTATCCGACCATCCCCTCTCGAACCCGGTTGAAAACATGCC
TAGCCATACGGAAATGCCTCCGGAATTTCTAATGTTTGAACAACAGATTGATTGTGTCAA
AGTAGTCCTTCCATAGAAGGAAATCTCCGCTCTCTCGGTTGCGATTCAACGCCAAAACAT
GCCCCGGAATCGAGCCCCGGAACAACAGTCGCTGCCTATTAAGGTGGTCATGGACGAACA
CGGCAAGAAGCATCTCCTCATCATCGGAGTCGCACAGAACATTAT