morexGenes - Barley RNA-seq Database

Contig contig_1578172

Source Contig contig_1578172

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1578172 (1784 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_1578172

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_17819	1	629 bp	AK375907	Available	Available	None

CDS Structure of MLOC_17819

Contig Sequence (1784 bp)

>contig_1578172 1784 assembly3_WGSMorex_rbca.fasta
CGCCGCCGCCGCCGCCGCCGAAGCCGCCTCCTCCTCCGCCGGAGCGGCGGGACTGGGCCT
CGTTGACGGTGATGTTACGGCCGTCCAGGTCCTGGCCGTTCATGGCCTCGATGGCCTGGC
GCATCGCCTCGTCCGACGCGAAGGTGACGAACCCGAACCCGCGGGAACGGCCCGTCTCCC
TGTCAGTGATGATCTGCGCATCCAAAAAATTCACACACAAAAAAATCAGATCCCTAGCTC
AGATCCAGAATTCAACATGTCGAACACCGCGGATCCATCTCGAATCGAGGAATCTACAGA
TCTATCGAGCGGATCGGGGGCGGGGACGGGGGACGATACCTTGGAGTCGATGACGTCGCC
GTACTTGGAGAAGGCGTTCTGGAGGGACTGGTCGTCGGTGGCCCAGGCGAGGCCGCCCAC
GAAGCAGCGGTACTCGACGTCGGCCATCCTTCTCCCCGCCGCTAAACCCTAACGAACCGA
ACCGAACCGGACCGGGGGAACCGAGGACTGAGTGGGGAGGAGAAGCCAACCCCTGAGAAA
GCACGAGGAGTCAAGGTCGCCCTAGCCGCCCCTTTTATAGCGCGCGCGGCGCCGCGGGGG
CCGTCGTGATCGGATCGGACGGCGGCCGCGGGATAAGGATCGAGCGAGATATTTTCGCGC
GATGGGCTCGAGGCGGGAGGCTTCTGGCTTTCTGGGCCAGCCCACGATCGGTCGATCGAT
TGGCGCTCGCGACAGGAAGATATTTTCGGCCGGGGAGGAGCGTCGCGTCGTCTAGGGTTT
TCGATTCCCGCGCCGCCACCAACCCCGCAGCCCCTTTGCCCGATCGGGTCGTGGCGCGCC
GGACCTGGTATGGACCAATCACGCGGCACGTCGGCAGATATTTTCGGGTAGCGGCCACTT
GGGGTGAAACATGCTACTCCTACTTTTATTCTTTGATGGGAGGAGTGAAATGCAGTTTGC
AATGTCATTGCATAAATACGTGTGTTTAGGGGGGGTGATTAGTTTAGGTTTTGATCGTTC
GACGTCTTGGCTTCGAAGACGAAGGCGTTCGTGTTGAGTAAAGAACCTCCGGACCTTGTG
AGGACGAGGCGTCATGTTCTATGATCGGATTTCGGGAGTGGTTTGGTTTGTTCAAGCGGG
GATGGTGGCGCTGGCATGCTTATGATGGACTTGTGCCCTCGAGCTTCGCTCGTGCGACTG
TGTTTGCTCTCGCGTTAGTGTGGAGCACAAGAAGAGGAGGTTGGTTAGGAACGGGTGTGG
ACGATGGTCTAAGTCGACGACAGCTGGAAGAAGGTGCATTTGTGGTTGAAGGTTGATGGG
TCGGGTTTCCCTCCTCCGACATCGTCAATATCTGAAGAGGGACAAACTCTTCGATTTACA
ACATTTATGAATTGAAAAAATATGAGCTCTTTGTTTCTCGAGGACAAACGGCTCTTTCTA
TGTACCGTTGATAAAAAAAGACTAGAAAGAGATAGAGGGGTCACGAAGGGCCCCGAAGTT
GTAATAATAACAAAGTAATGGAATACATTGTTTCTTAATCTTTTTTTAAAGTAAATCTTG
ATAAAAAAAACATCAACATTAAATTTGGCAAATACCACGGGAGGCCAATCACCCTCCCTT
TTCACGTTAGCATGGTATATGATGGGACACACACACAAAATACGCGGAGCGCCAAGAATA
TATCATGTCGATAAGACTGAACATCATTTTATATAGCTCACGTGTTAGGCCCTGTTTGAA
CCCACAATAGATTATGATAATCTGGATTATGAAGATAGATTATA