Contig Data
morexGenes
Links



Map Locations of contig_1578020 (4044 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1578020

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17787 3 2634 bp AK355082 Available Available None





CDS Structure of MLOC_17787






Contig Sequence (4044 bp)

>contig_1578020 4044 assembly3_WGSMorex_rbca.fasta
CGGTCTCGGGCTGTCACAAAGAACCAACGGATGAAAGTAGCCTCCATAGCCGACCACTCA
GCGTCGTGTTTCAGGCCTCGGCAGACAAGGTGGTACTCACAGAAGACAAGGTTGAAGTAG
GTCTTCTATGGGTAGTAGGAGGAATCGTCTTGGGAGAGACGGATGGGGACGCGCTCGTGT
ATGTTGATGTTGCGGATGTCCTCGGCGGCGACGGGATCGGGACTGGCAAAGGGGTTGGAG
CCAGAGATGAAAGACATGGTAGGAGCGCGTGGGGGAGGTGGACGACAACTACAATGGAGC
TGCGGCGGTCGGGTGAGGGAGACGACGACAGGAGGGCTGCGGCAGTCGGGTGAGGAGGAC
GGCGGCAGAAGGGTTGCGACGGTGGGGTAGGGAAGACGACGGCAGGAGGGCTGCGACGGT
CGGGTGAGGAGGACGGCGGGAGAAGGGTTGCAGCGATCGGGTAGGGAAGACGGCGGCAGG
AGGGCTGCGACGGTCGGGTGGGCGGCGGCGGCTAGGAGAGATGGCAGCAGCACAGGCGCG
GTGGCGGTGTCAGAAGCAATTAGGTTAGAACCGGTTCGGTATCTGATACCATGTGGTTTG
ACGATATTTAATTTGCCTTAGCATATATAGAGTACATGGACAGAAATATCTCAACCGTAT
CCGCAATACAAGGAAAAGATCAGGAGATAAACTAGGAAATAACAAACATAATCCTAGCTG
CCTAATATACGTAATGATCATGCTCAACAGGGATTGCTAAATCTCAGTTGATTAAGATTT
AACTAAACCTCAATCAATGCTTTATTCGTAAGATCTTATGTGAAGATCCGTGTTTTTTTC
CTTTCCTTTTTCTATATTATGTGACTTGATCAGTCGAGTGAGGTCTAACCACACCTCTTA
AGACTATAGTACCTTGGAGTAGACAGGATGAAAACAGAACATTCTTGTATTATTGGCACA
CTAGCAAGTACCGAGTGCAAGCCCGCTACACACCCCTTACAAACTAACGTGGTATGCTTA
TTCATGTACCTGTTCATCCACTCATTCACCAAATAAATAATAATTAATTAATTTCCTGGG
GGCAAACCCATCCAGCCGCGCCATCATTTCCACAGGCCGAGGAAGGTGAAGATGAAGCGG
ACGTAGTCGTAGCGGTAGAGGTGGCGCATCATGGCGATCTTCTGCTCGTCCCACGGCGGG
TACCTCAGCATGGCCTCCACCAGGAACCCCCGCCGCAGCACCGCCTTCTTGTGGCTGAAC
ATCTCGAAGGAGTACTTGCCGTGGTACTGCCCGAACCCGCTCTGCCCCACGCCGCCGAAC
GGCAGCGAGTCGATCCCGAACTGCACGCAAATCCATCCAGGAGCCATGGTTAAACCCATC
GGTCAGAAGAAAATGTCGTTGGTTTACAGGCGGCCTACTTGCACGACGGCGTCGTTGAAG
GTGACGCTCCCCGACGACGTCTCCTCCACGATCCGGCGCTTCAGCGGCGCGCTGTCGGTG
AAGGCGTACACCGCCAGCGGCTTCGGCCGCGCCCTCACGAACGCGATGCTGTCCTCGATC
TTCTTCACCTGCATGTATGTATGGTATGTATATGTGACCACCACCGGGAAGGAGACACCA
TATTCATTCATTCTGCCGCTTTGCTTGGAGTTGGGTTAGCAGAACTTGGTACCGTGATGA
TGGGGAGCAGAGGGCCGAAGATCTCCTCGGTCATGATCGCCGAGTCCAGCGGCGGGTTCA
GCAGTATCGTGGGATCGATGGACCTGATGAAGTCTTTATTTGATGAGGAGACGAGGAAAA
TAATAATAATAATACGCAGATGGGTTGAGGCCTTCAGGGTTTGCTTACAGGTTCTTGGCG
TCTAAGTTGCCGCCGTGCAGGATGGATGCCGCCACCGCCGGGTCCTTGAGGAGGTTACTC
AGCCGCTGGAAATGCCGCGCGTTGACGATCCGCGCCATCTGGTCCGAGTCGGCGATGAAC
CTCTTGAGCGTCGACTTGAGCAACTTGATCTTCACCACCACCCAAGAGAAACGAACACGT
GAGAACGATCTTCTGATCAGAATTTTACATAGCCACCAGACAAAAGCGTGCGTGGGTACC
AGGGTGGGCGCGAATCGCTCCTCGACGAGCACGTAGTCGATGGCGATGCAGGCCTGGCCG
GCGCAGGACGACCACTTGGCGAAGATCACGCGGTTCACCGAGGACTGGAGGTTCCTCCTG
CCGGCAACGGCGTCGAAGATGCAGGGGCACTTCCCGCCCAGCTCCAGCGCCACCGGCGTC
AGGTGCTTCGCCGCCGCCGCCATCACCACGCGCGCCACGCGCGGGCACCCTGCCAAATTG
CCAATGCCAAGGGTTCTACCTGGTTAGCACCAGTACCAACCACCAACACTAACTGATTGC
TGGCCTGTCAGCTGGTTGGCCGTACCGGTGAAGAGGACCTTGTCCCATCTGTGCTCCATG
AGCTGCTCGCCCACCGCGGGGCCGCCCTGGATGACCTTCACCGCCGTGGCGTCCAGGTAC
TCGCCTATGTTCTCCTCCAGGAACCTGGCCGTCGCCGGCGCCAGCTCCGACGGCTTCAGC
GCCACGGCGTTCCCCGCCGCTATGGCCCCGATCAGCGGCTCCAAAGACAGACCTGTGCAC
GTCCATATATAGACCATGCATCATGCACTGACCAACATTCTCTCTCTGTGATGTAACACT
AGGAAGGATCCATTGATGAGCTTCGAGGAAGGAAGCACGGTAACTCTGGGATGGCCGGTT
TTAACCGTTGCTGGTGAGAGCCGCGAATTGGAGTTTTCTTGCCCCAGCAACGGAGGTGGT
ACCACTGTCCTGCCCATGCCTGCCCGGTCGTCAATGCTTTGGTGTGATCTGAGACGCGCT
ACAGGATAAGGCTACGGCATGCAGCGTGGTGCACCCGTTCCACAGGCAGTGGACCAGCAG
CTGTGTAGTACCTCCCGGGATCTAGGGCAATACCACGACGACACAAGCTTACGTCCGTCG
CCGACTGAGGTAGCAGATCCGTGGGATCACTGCAAGCGCTGTTGCACGGCATGTGCGCTG
AACTAGCGTATGACTCTGCATTAAAACTGCATGGCTCAATCTGAGCATTGACAATGGCAA
TGGCAATGGCATGGCATGGCCGACCCACAAACGGACGAAGGCACATGGATCGGTCTCCAG
CAAAAATTGAAGGCGCTTGGACGGAGGCTGCGGACTGGGGAGAATAAGCTGGTTCTGCCT
CCCCCAAATGCGATCCAAGAAAAGTCCTTTGCCTCCTCCGTTGCCCCCACCCCACTCTCG
CTGGTGACACAATTACTCTTTCGTCGCGCATGGCACTCACGACACACAACAGTTTTTTGA
TTTTTTTTTAAAAGAAAATGTAATGACTGACGATACCATTGGCGACGTATTACTGTCACT
CGGAAATAACCACTGTTATCAGAACATACATTTGGACTTCTGATTGCTTGATTGCTGGTC
AGTTCAAAAGTTCTTAATGATAAATAGTTTTTGGACAAGAATGATGTTGGCTAATAAACC
TGAACAGGGGAAGCACAACGCCAGATTTATCACAATTTTCTGCGTAGCTGAGTCATCTTA
CTCTGCGTGTTCGAAAAAAATCAGAGCGCCATTGAACCATCAACAGAAAAATGGCCATCA
AGGAACAGAGAAAATCAATGTTGACATGGCTTGTGTACTCTTGAAGGGATTGCCGACGTC
GTGAGTGCGCCCCAGCCCATAACTCCTGGTCTACACAGCCGACGGACGATTCCTCATCTT
TTTTTCTCTTGTGATTGTGAAGAATGAATGCATATTCTTTCAGCGGTAGGATGATTATTA
TCGGACCGCTAAGAGCATCTATAGTAGAACCCTCAAACCCCCAAACCTTTAAAAATAACC
GCTTTTTTTAAGTTTTCGTCCGAAAAACGGCGTAGATTAGAACCCTTAAACCCTTAAACC
CGTAAATATTTTTAGAGGTCCAACCCTCAAACTAGTTAACCCGCACTCCACTTCCCCCCT
CGCGCGGGAGGTAGTTGGTTCCCG