Contig Data
morexGenes
Links



Map Locations of contig_1577984 (3262 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1577984

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17775 1 1000 bp AK368921 Available Available None





CDS Structure of MLOC_17775






Contig Sequence (3262 bp)

>contig_1577984 3262 assembly3_WGSMorex_rbca.fasta
TGCAAAATGACCGACGACGGACGACAGANNNNNNNNGCGCTTTATTATTAGGGGAGATAG
CGGATACCAAAGCAAGATGAGTCTATAGCCTAATAAATGATAGACTCAATGTTACTACCC
CTATGTTACCATCCATTGTGGAGATAGTAATTTAGACTAATAACATATATATGTTACTAC
TCTATGTTACTCTCCATTGTAAGTAGTCTGACGAAACAGGAATCTGAGTGACATTGTACG
GTTTTCTGGAATTATTTCAGTTTTTTTTTTTTGAATGAAAGGAATTATTTCAGTTTGTCA
GGTTGACGTAGAAAATACTTTGTGGATCTTTCAAAGCATCCATATTCCCCATGTATTACA
CAACAAAAATTATTAATAACTCTTACTTGATCGTTGCAATACTATCCTCAATATGATAAG
AATCTTTCAAATTACTTCAATAGATAGATTTGTCATGGTCTGGAAGATATAACATGAGAA
CGACTAGTTATGTGTTGTATTTAGCTGGCAACAACGACCGACTCAAATCCGTTGTCAATA
GAAGTCTTCACTGCATCCACGACAATCTGTGTCTTTCGGGTGATGCCCGGCCACTTCCCC
TCAGGCTTGGCACCCGCATCTCTGATGCTCTGCACCAGCCTACAGAACTCCTGGACCATG
AGCCCCTCCTGGGGTAGGTCCGTCGTGACAACATGCTTGCTCGGATGTGGATCCCATCCA
GTTGAGAGTTCGGCGAAGTTTGTCTTGGAGGCGACGCTGAACGGAGCAGACTTCTCTTCG
TACGGAATGACCAAGTCGGTGACATGAATAGTACCATTGGTGCCGACGACGGTGAGGTCC
ATGGTCAGGTTGGTAAGGAAAGAACAGTGGAAGGTGGCGACCTTGCCGTCGGCCCAGTAG
AGCGACGCGCCGCAAGCAAGCAGAACGCCAGCTTGGTTTTTGACAGGGTGACGGAGAGCA
ACCACATTCTTGGGCAGCTCATAGTCAACAGCCCACAGGATTCCACGGATGCAGTACCAC
CCGATATCACCCAGCACACCCAGGCCATCAAGGTCCGGCTTTACCCTGATGTCATTCTGG
AGGAAATCTTCGTTTGCTAGAAAGCTGACCATGGTGTTTATCTGAAGCAGCGTAAGAGAG
AAAATACAATTATTTATCTTCACAGCTGAATGGTGACAATTGTATAAGTTCCATATTAAG
TTGACAACAACGGTGTGGGGTTATGTCAGAGAATAGATCGTCACACTGTTAGTTGGGGAA
CACTTGGCGCATGCAGAATGGGAATAGATCATTTCATGAGCATTCAGAATCCATGTATGT
GCTATAGGTTTCAGAGTTCAAGTACTACTACTCCCAACCAAACTCATAAATTGTTGCTAT
GGGAGTAACAGGCAACAATTTGAATGTGTGGTATCCGTTGTCTTCTCTGTCCCCAACAAA
CTCATAAACTAGAGGTTTTAGCCACTTTGAGACAAAGTCAGCCTCAGTTTCGCCTTTTAA
TGCCAGTTTCAACACTTCCAGCAGTATCAACATGTTAATCTGAACTCAAGGCTGTAGACC
ATTGTCAAGCTGTTGTATCCTGCTTACGAATGCTTTCAGTTTTTCTTTTTCATTTTCATG
TCTTGGGGTACTGTGCAGTCTGCAGTGACATTTTGTCTTCTTTTATTCTTCCTTTGGAGT
GTGAGCAACTGAGCATCCAATTATATGGTGGTTTATGTAGTCATTTATAGTGTTCATTGT
TGTTTAAGAACAGTACCTTCTGTGGTGGATGATGAACTATGCCTTTGTATCAGGTGGCAA
GTTATATGGTTTCATTAGTGTAAGAACATCGTGCAGTCTTGGACACACGAGGTTAGTACT
GTACTTTGCAATGTAATGTTGCTCCCCAAGTCATATTCTGGCAGAGCCTTTGAAGCTATT
CCTTTTCAGATTGTTCAAAAGCCAAAATCATCTCACAACCCAGTAAGGTTCAGTAGCGAG
AGTTCAAGCATTCCACAAAGTTTTTTTTATTGGTTGGTACCAAAAGGCAACTAGGCTACT
AGCCCGTGCTGGATACAACGACAAACTGCAACTGGCTCCGGCACCACGCTCAGAGTTCAC
TAGAGAATCTTTTAACGCTTAGAATTAACATGTGTTTGGCTTGTTAGGATTATAGTTGTA
CTCTCAATCCATCAGGGATCAAACCACATGTCTAACATACGTGTGTCTCAATTGTTTAGA
AAAAAATACATGTGTGTCTGAGGTGTCAAGAGAATGGCCCTGTTTGAATCCATGAGTTAG
AGTTAGAGCTGGTTAGATTGGACCGCACTAACCCCTAAACATCCAAACAGGAGGGTTAAG
AGTTGGTTAGATGCATCTAACCCATTCAAAAGAACTAACCCACCCAAAAGGTGTTTATTT
AGGTTAGAGTTAGGTGGAACCCAGAAAAAGTTATTTTTTTTTCTATCTCCACCACATCAA
ATCCTGGTTAAAGAAGTCAAATGATTGAAAAAAATGCATTTATTGACAATCTAGCCCTAT
CATCCAAACATTTTTTTTAGTTAGAGTTAGTTTAGGGTTAGTCTAGGGTTAGAATAACCT
CTAACCGAGTTAAAGTATCCAAACAGGACCAATGTATTATTTTGGTGTGTGATGGGTTAT
TAAGTGGTCCACATCTAGGCTAGAACAAATACGTCATGGATTGCATCGACAATCAAATAT
TTCTGTACCCGGAAAGCAAAATTATAATTTACAACCACGAAATGGGATTAGTAAAAGCGT
GCAACATGATTCGAAGGGCATACGCTACGTTGTTAAGATCCTAAAGTAAAGTGGATTCAG
AAAACGAAAATGATGACAGTTTCAACATAATGTGGTGTGCGAGCACTTACAAATCTGACG
TCTCCGATGGTGTCCTGATCGGCGACGAGCTGACGCATCTTGGCAGTGCGGGGGTGGTGC
ATCCACATGGTGGAGTCCATGAACTGGACGCCGTTGGCCTCGCAGGCGGCGAGGATGCGC
TCGAGGTCGGCGGCGCAGGGCGCGGTGGGCTTCTCGAGGAGCAGGTGCTTGCCTCGCTCG
GCGGCGGCGGTGGCCCATTTGACGTGGAGGCTGGTGGGGAGCGGCATGTACACGGCGTCG
ATGTCCGGGTCGTCGAGGAGCGCCTCGTATGAGCCGTGGATGCGCGTGCCGCTCCGGAGG
CCGGTGTCGGCGGCGGGGAGGCGCGCCGTGCCGCCGGCGCGGCTGAGGGGGGCCGGCGCG
GCGGCGGCGGGGGCGGGCGGGG