Contig Data
morexGenes
Links



Map Locations of contig_1577313 (4845 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1577313

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_17612 1 1177 bp AK362861 Available Available None
MLOC_17611 1 302 bp None Available Available None





CDS Structure of MLOC_17612






CDS Structure of MLOC_17611






Contig Sequence (4845 bp)

>contig_1577313 4845 assembly3_WGSMorex_rbca.fasta
CCGACCATGGCGCAGGTGCGGGCGGCCGTCGCGGAGAAGGCGGCGAGGTCCATCGCCGGG
ACGGACGGCGGCGACGGTGACCTCAAGTTGCTCGACTTGTTCCGCATGACCAGCTAGCTG
ACCGGAGTACTGCACCCCATTTTTCAGAAGCTCTATTAGCTTCATCTTCTTCTTCTCCTT
GTGTGTGTGTGTTTTAGACATCTAGTGGTAGAAAAATGGATTGGTTTAGTGTAGTGTCTA
GTGCTAGAATTGAGTGGGATGTAAATATGATTCGACTTCACTTACTTCCATGAACGGATG
CAATAAAAATTCCGAAAAAATAATTTGTTTGCTTTGGTGTCGAATGAGAATTCTTGGTTC
CAGAAATGGCCAGTGCTCAATGATCATGGGATCCTATAAAAAGGAATTGGATACATAAGC
TTTCAAGGATCTGAAGAATGGACCAAGATCCCCAATGCATAAAAATTGCAATCATGGTGA
TAGAAGGGATTTCTAAAGGTTTTCGCCAAGTCCCAAGTGATTTTGGCAGGTTGCAAATGT
CTCTGGGTTACTACTTACTAGTAGTACCAGTAGCAGGGGAATTTACTGGACCTCAGGACG
GAAACACAGGGCCAGAATGGAAGGTCAACATGTTAACAAGAGAGCACATGTACTGAATAA
TTAGGCCCTGGGTCAGGACAGAGAGAGGGGTTTGACAATTAGGCACTGGGTTAGGAGAGT
GCTGAATAATTGAAGGGTCAGGTACTACACCACTACTTGATGGCAGCAAGAGCATCAAGC
ACCGGAGCTTCTCAAACACTTTGCTCAAACATGCCCACTGTCAAAAGTGCTGGACCAGTC
AATAATACACAATGATTGTACCAACTCGAAACAGCGATTATTGGGCGTCGAGTCACCGTA
ACGTGCGTTGAACAGAGCGTAAGGCTTGGTTGCCACGGAACCAAATTTACCGATATAAGA
GAAAAAAAAAGGAAAAAAACACACACGAGATCACGGAGCAAAAAGTGGTGTACCGATTAA
AGGATATACATAAGAGATGGTTTTGTCAGCATTGATGTTTCCAGGCATGGATGGAGGAGT
GGCACCATACTGGATTACTATCAATTTTGATGGAGGCGACTCGGACCGCCCTGGCCAGGT
TCCTGCCTGTGCCGCGTCCTCTTCATCTTTGCTTTGAACCTCAGTTTCAGGGCCAGAGTC
TCCACCGTGTTGACGAAGTTGCCAACCGCCATCACCACCAGCAAGATCCCACAAACTATG
ACCTGGCAAGGCGGGCGACGACAGTGGTCAGTTCAGGGAGGGGGGACCGGATAGTAGGCC
AAACAACAACACGTTTGGCAGATACCAAGTGCATGGCCTAATCCTTATGGAAACTATAAG
ACTCCAACTGGGATTACTATTGATATTTGATACTTGCCTGCCATTCAGAGGTGAGCCCGT
GCCACGCCGTCTGAAGAAGCAACACTCCAACATATCCTTCAAACCCCTGTAAACATGAGT
AACCAAGAAGATGAGATCCAATGGTGCAGACCTAAGTCATCATGTTGCTCCTATTCTCAC
TTTGACTGAACAGTAAGGTATAGACATATATGTAATTAAAGTATGAAGAACCAAACAACA
TGACCACCAAGAATCGGTCATCTACTGACCGCTAATTAGTTCCCTGCAAGGTCCTGGTTA
GTTGCCATATCATGGGAAAACTAAGAGCAAACATGTTTTATGGGCTCGCCTGACACCTAC
CTGTAATACAAAAAGAACAGGATATAGTAGCAATAGCTGCCCTTCCACACCAGCTGTTTC
TCCAGCGACGACATCCATTCTTTTAGCCTGCAAGTAGTCAATGACAACAGAATAAATCAA
AATGAGACAAAGAAAATACCACTCTTACTGGTACAAAAAAGTTACGGTGGGAAACGCATA
ATTATGAGAACACCTATTTAACAGTGCATCAAGTTTACAAAAAAGCGTTTGACCATAAGA
TTTATTTTAGGGAAGGTCACAACTCTTATATTCATTTATTTGTGTAAGTGCTGTCTCCAA
CTCCTAGCTAAACAACAAGAGGACTGAATTGCTTTTCACAAGCACCAACTATAGATCTCC
ATGAATATACATTGATTACATGCAGGATCATCAAAAGGATGATCAGAATCTTATTTAATA
ATACTAGTTACTTTTTAATACTCAAGTTCCAAAGTTCAAGTATTAAAATGAGTAAAGGGC
ACATATCAATCTTTTTTTTAAAATTAAAGGAAGGCCTCACCTTTCCCAGAGCAATTCGGG
TGCGTAATCTTTGACGCTGGTACCTATTCTGTAGATGCATTGCAATTCCTTGCATGATTG
CCCAACGCAGGAAAAGTTGTACCCCTCTCTGCAAAAAGGCCAGATTGTGAGTTTATAGTC
TTTAAAATTCGGGACTAACGACAAAGCAACATACACACTTCTATGAAAACATCATATACC
TGCTTACTCGAGCAATCAGGCTGTCCCTTTATCTCCCAAGTAAGGCTAACAAGAGCCATT
AGCATTGCTAAATAGTGGTGGTATATCCACCTGAAAATATAGCAGCATATTATGATTAGA
TGGTCGTGTTTGTAGAAGAAATTAGTTTTGGAAAATTTAGAGAACAAACTGAACACGGCC
TTGAGGCAACAAAACAAACAGATGTTCTGATGCCAGATTTGAGTGCCAAATATAGACATT
TAGTAAAACTTGAGCACACTTAACTTGACAAGTTTTGTTTCAAGAAAAAAACTGGACAAG
TTTCAAAAACGAATTGCTTAAATGCTGCAGTCTACAATTTCATATATGAACCGATGAAAG
TTTTCATCCTTACCAAGGACGAATATCACTTCCATTTACAAGCAACACATTCTCCCGCAA
AGCAAAACTTGTGTAGAGGAATAATAACCAAGCCTGCAAAGTGGAAACATAGTCTTTTTA
TCAATTCTGTCGGACAATGAAGTGATGAGCAGAGGAAATGTACTCAGGGTATGTGAAAGT
ACTCAACAAATACCTGGTACACCTGAACTGCCAATGCTGGAAGGCACCCATCCCACACCC
ACCATCTCAGTAAGAGGAGAGTGGATGGAAATAACAGGAACATATAAGCAGCCCTATCCT
GCCAAATGCCAATAGAAAAGGTTAAACCATCTAGATTGTCAGGCTTTGTTTAGAATTTTG
GAAGATAAAAAATGTTAGCAAGCTTACAATATTTCACTAACAAAATACAATTTGAACTGA
ACATACATAGTAACCTTACAGAACCTTGAAACATAATTACCACCATACAGTACAACATTA
TGTTTATCTAAATTAACTAACCCAACTTTGTCGCATGCAAAATAGGCAGGAGATTTTCAA
TTTGCATGACTGTGAACTTGAACATACAGACATATAGTCTTGACAGTTCAAATTTAGCTT
AAATACTTGTCAGCAATGTCAGGGGAACACTGACATAGGCCATATCATTTTTATAAATGC
CTAAGATAAACCAAAATTTATGCAGCACAAATAGTTACAATCATTAGAAGTTTATGTTTC
ACCACGAAAGTCATTAAAAGTTCAGAATGCATTAATCACCATACTAGAGGTCCTGAAGAA
TAAGCAGATCAAACTTAACTTAAATACTTGTCAGCAGTGTCAAGGGAACAGTGACACAGG
CCATATCATTTTTATAAATGCCTAACATAAACCAGAATTTATGCAGCACAAATAGTTACA
GCCATTAGAAGTTATCAAAAGTTCAGAATGCATTAATCACCATACAAGAGGTCGTGAAGA
ATAAGCAGATAATTTCAATTTATTCAGTTCGTGATGCCATACCATGAGAAAAAACCACAC
ACAATATCTAAAGGAAAAACATCTGAAGATTATTACCCTATAGTTGTTGTACTCGTCCTT
CACTTTGAGCTTGTCCTCCTTCCTTGCCACCCGCACATTCACAGGGCCAACAAACTTCTT
AAGGAACTTCCCTGAAGGTTCACATAGTAAGCTTCGACCATACAGTAACTCATAAAGAAA
CAAATAAACTTCAGCCCAGACAAAACTGGTGGCAGGGAGGAAACAAAATGGAACTGACCA
TTGCCCTTGCTTGGGAGAAACGCAGCCACGTCGCTGTCCAAGATTGCTGCCCTGGCGCGC
TCCAGTTCCTCCTCTACCTGCACATATGGCAACATAATACAAACCACAACATAAGAAAAT
AGCATGCTAGTATGAAAAGTTGTAACATGTGGGAACTCGAGACGGAGATTCTTATTTGGG
CAACTGAGACTCCATCGTTTGTAGTACATGCTAAAACAATGACATGGAAGTAGTGCGTAT
AACAATTGTGGGCTAAGGGATCAGAGAGCTTAAGCGGTGAAGGTTGGCACACTGTAAGCT
CGAGAACTGGTGAAGAGGATCCCCTGGTGCTAATAAGGCGAGATGAAGCAGCGATCGGAT
CGGCGAACGCAGCTCGTCGATACAAAAATCGTTCGCCAGCATCCAGCAATTCGATGCGCG
CGCCGCAAATCTGTGCACTCGTGGACGAATAATAAGCGCCGCACCTTCGTACAGCAACGG
GATTCAGCCGGATCACGGGGCAGATTCCGACGGCCGCACACATCGAGCCCGCGTCGCGAG
GCAGCGGCAAAGCGGAGAAGGCACACGGCGGTGCCTCGAGAGCTGGCCGGAGCGAGGGCG
GCGGCGAGGAGGGATCGAGTTTCGAATCAGGCAGGGAGAGGGAGAGAGGAGGAGGAGGAG
GAGGGAGAGGGTGAAGGAGGGGGGCGGACGCGGACCTTGTCGAGCGGGGAGGGGTCGAGG
GGCGTAATTACTTCGTATCGCATAGATTATACGAAGGTATAGGAG